DNA replication origins-where do we begin? von Prioleau, Marie-Noëlle, MacAlpine, David M

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Epigenome characterization at single base-pair resolution von Henikoff, Jorja G, Belsky, Jason A, Krassovsky, Kristina, MacAlpine, David M, Henikoff, Steven

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Genome-wide chromatin footprinting reveals changes in replication origin architecture induced by pre-RC assembly von Belsky, Jason A, MacAlpine, Heather K, Lubelsky, Yoav, Hartemink, Alexander J, MacAlpine, David M

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Capturing the primordial Kras mutation initiating urethane carcinogenesis von Li, Siqi, MacAlpine, David M., Counter, Christopher M.

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Co-orientation of replication and transcription preserves genome integrity von Srivatsan, Anjana, Tehranchi, Ashley, MacAlpine, David M, Wang, Jue D

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Conserved nucleosome positioning defines replication origins von Eaton, Matthew L, Galani, Kyriaki, Kang, Sukhyun, Bell, Stephen P, MacAlpine, David M

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Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition von Lujan, Scott A, Clausen, Anders R, Clark, Alan B, MacAlpine, Heather K, MacAlpine, David M, Malc, Ewa P, Mieczkowski, Piotr A, Burkholder, Adam B, Fargo, David C, Gordenin, Dmitry A, Kunkel, Thomas A

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Drosophila ORC localizes to open chromatin and marks sites of cohesin complex loading von MacAlpine, Heather K, Gordân, Raluca, Powell, Sara K, Hartemink, Alexander J, MacAlpine, David M

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Chromatin signatures of the Drosophila replication program von Eaton, Matthew L, Prinz, Joseph A, MacAlpine, Heather K, Tretyakov, George, Kharchenko, Peter V, MacAlpine, David M

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Dynamic loading and redistribution of the Mcm2-7 helicase complex through the cell cycle von Powell, Sara K, MacAlpine, Heather K, Prinz, Joseph A, Li, Yulong, Belsky, Jason A, MacAlpine, David M

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Sir2 suppresses transcription-mediated displacement of Mcm2-7 replicative helicases at the ribosomal DNA repeats von Foss, Eric J, Gatbonton-Schwager, Tonibelle, Thiesen, Adam H, Taylor, Erin, Soriano, Rafael, Lao, Uyen, MacAlpine, David M, Bedalov, Antonio

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Rare Codons Regulate KRas Oncogenesis von Lampson, Benjamin L., Pershing, Nicole L.K., Prinz, Joseph A., Lacsina, Joshua R., Marzluff, William F., Nicchitta, Christopher V., MacAlpine, David M., Counter, Christopher M.

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Expression in aneuploid Drosophila S2 cells von Zhang, Yu, Malone, John H, Powell, Sara K, Periwal, Vipul, Spana, Eric, Macalpine, David M, Oliver, Brian

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Chromatin conformation and transcriptional activity are permissive regulators of DNA replication initiation in Drosophila von Armstrong, Robin L, Penke, Taylor J R, Strahl, Brian D, Matera, A Gregory, McKay, Daniel J, MacAlpine, David M, Duronio, Robert J

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Stochastic initiation of DNA replication across the human genome von MacAlpine, David M.

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The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote von Schübeler, Dirk, MacAlpine, David M, Scalzo, David, Wirbelauer, Christiane, Kooperberg, Charles, van Leeuwen, Fred, Gottschling, Daniel E, O'Neill, Laura P, Turner, Bryan M, Delrow, Jeffrey, Bell, Stephen P, Groudine, Mark

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Nucleosomes influence multiple steps during replication initiation von Azmi, Ishara F, Watanabe, Shinya, Maloney, Michael F, Kang, Sukhyun, Belsky, Jason A, MacAlpine, David M, Peterson, Craig L, Bell, Stephen P

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Noncoding Transcription Is a Driving Force for Nucleosome Instability in spt16 Mutant Cells von Feng, Jianxun, Gan, Haiyun, Eaton, Matthew L., Zhou, Hui, Li, Shuqi, Belsky, Jason A., MacAlpine, David M., Zhang, Zhiguo, Li, Qing

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Mcm2-7 Is an Active Player in the DNA Replication Checkpoint Signaling Cascade via Proposed Modulation of Its DNA Gate von Tsai, Feng-Ling, Vijayraghavan, Sriram, Prinz, Joseph, MacAlpine, Heather K., MacAlpine, David M., Schwacha, Anthony

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Coordination of replication and transcription along a Drosophila chromosome von MacAlpine, David M, Rodríguez, Heather K, Bell, Stephen P

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