Rationale for reconsidering current regulations restricting use of hybrids in orange juice von Stover, Ed, Gmitter, Frederick G., Grosser, Jude, Baldwin, Elizabeth, Wu, Guohong Albert, Bai, Jinhe, Wang, Yu, Chaires, Peter, Motamayor, Juan Carlos

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Low-cost assembly of a cacao crop genome is able to resolve complex heterozygous bubbles von Morrissey, Joe, Stack, J. Conrad, Valls, Rebecca, Motamayor, Juan Carlos

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Sequencing of a QTL-rich region of the Theobroma cacao genome using pooled BACs and the identification of trait specific candidate genes von Feltus, Frank A, Saski, Christopher A, Mockaitis, Keithanne, Haiminen, Niina, Parida, Laxmi, Smith, Zachary, Ford, James, Staton, Margaret E, Ficklin, Stephen P, Blackmon, Barbara P, Cheng, Chun-Huai, Schnell, Raymond J, Kuhn, David N, Motamayor, Juan-Carlos

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SNP markers associated with resistance to frosty pod and black pod rot diseases in an F1 population of Theobroma cacao L von Gutiérrez, Osman A., Puig, Alina S., Phillips-Mora, Wilbert, Bailey, Bryan A., Ali, Shahin S., Mockaitis, Keithanne, Schnell, Raymond J., Livingstone, Donald, Mustiga, Guiliana, Royaert, Stefan, Motamayor, Juan Carlos

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Identification of Climate and Genetic Factors That Control Fat Content and Fatty Acid Composition of Theobroma cacao L. Beans von Mustiga, Guiliana M., Morrissey, Joe, Stack, Joseph Conrad, DuVal, Ashley, Royaert, Stefan, Jansen, Johannes, Bizzotto, Carolina, Villela-Dias, Cristiano, Mei, Linkai, Cahoon, Edgar B., Seguine, Ed, Marelli, Jean Philippe, Motamayor, Juan Carlos

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The impact of SNP fingerprinting and parentage analysis on the effectiveness of variety recommendations in cacao von Padi, Francis K., Ofori, Atta, Takrama, Jemmy, Djan, Esther, Opoku, Stephen Y., Dadzie, Abu M., Bhattacharjee, Ranjana, Motamayor, Juan Carlos, Zhang, Dapeng

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Relations between several traits linked to sexual plant reproduction in Theobroma cacao L.: number of ovules per ovary, number of seeds per pod, and seed weight von Cilas, Christian, Machado, Regina, Motamayor, Juan-Carlos

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Assessing microsatellite linkage disequilibrium in wild, cultivated, and mapping populations of Theobroma cacao L. and its impact on association mapping von Stack, J. Conrad, Royaert, Stefan, Gutiérrez, Osman, Nagai, Chifumi, Holanda, Ioná Santos Araújo, Schnell, Raymond, Motamayor, Juan-Carlos

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Optimization of somatic embryogenesis procedure for commercial clones of Theobroma cacao L von Garcia, Claudia, Corrêa, Fabio, Findley, Seth, Almeida, Alex-Alan, Costa, Marcio, Motamayor, Juan Carlos, Schnell, Ray, Marelli, Jean-Philippe

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Somatic Embryogenesis in Theobroma cacao L von Garcia, Claudia, Marelli, Jean-Philippe, Motamayor, Juan Carlos, Villela, Cristiano

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Genetic Characterization of the Cacao Cultivar CCN 51: Its Impact and Significance on Global Cacao Improvement and Production von Boza, Edward J., Motamayor, Juan Carlos, Amores, Freddy M., Cedeño-Amador, Sergio, Tondo, Cecile L., Livingstone, Donald S., Schnell, Raymond J., Gutiérrez, Osman A.

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Making a chocolate chip: development and evaluation of a 6K SNP array for Theobroma cacao von Livingstone, Donald, Royaert, Stefan, Stack, Conrad, Mockaitis, Keithanne, May, Greg, Farmer, Andrew, Saski, Christopher, Schnell, Ray, Kuhn, David, Motamayor, Juan Carlos

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Selecting SNP markers reflecting population origin for cacao (Theobroma cacao L.) germplasm identification von Gutiérrez, Osman A., Martinez, Kathleen, Zhang, Dapeng, Livingstone, Donald S., Turnbull, Chris J., Motamayor, Juan Carlos

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Identification of candidate genes involved in Witches' broom disease resistance in a segregating mapping population of Theobroma cacao L. in Brazil von Royaert, Stefan, Jansen, Johannes, da Silva, Daniela Viana, de Jesus Branco, Samuel Martins, Livingstone, 3rd, Donald S, Mustiga, Guiliana, Marelli, Jean-Philippe, Araújo, Ioná Santos, Corrêa, Ronan Xavier, Motamayor, Juan Carlos

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ARG-based genome-wide analysis of cacao cultivars von Utro, Filippo, Cornejo, Omar Eduardo, Livingstone, Donald, Motamayor, Juan Carlos, Parida, Laxmi

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Microsatellite Fingerprinting of the USDA-ARS Tropical Agriculture Research Station Cacao (Theobroma cacao L.) Germplasm Collection von Irish, Brian M, Goenaga, Ricardo, Zhang, Dapeng, Schnell, Raymond, Brown, J. Steve, Motamayor, Juan Carlos

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Genetic identity and diversity of Nigerian cacao genebank collections verified by single nucleotide polymorphisms (SNPs): a guide to field genebank management and utilization von Olasupo, Festus O., Adewale, Daniel B., Aikpokpodion, Peter O., Muyiwa, Anna A., Bhattacharjee, Ranjana, Gutierrez, Osman A., Motamayor, Juan Carlos, Schnell, Raymond J., Ebai, Sona, Zhang, Dapeng

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A genetically anchored physical framework for Theobroma cacao cv. Matina 1-6 von Saski, Christopher A, Feltus, Frank A, Staton, Margaret E, Blackmon, Barbara P, Ficklin, Stephen P, Kuhn, David N, Schnell, Raymond J, Shapiro, Howard, Motamayor, Juan Carlos

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Optimization of a SNP assay for genotyping Theobroma cacao under field conditions von Livingstone, Donald S. III, Freeman, Barbie, Motamayor, Juan Carlos, Schnell, Raymond J, Royaert, Stefan, Takrama, Jemmy, Meerow, Alan W, Kuhn, David N

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Development of single nucleotide polymorphism markers in Theobroma cacao and comparison to simple sequence repeat markers for genotyping of Cameroon clones von Livingstone, Donald S. III, Motamayor, Juan Carlos, Schnell, Raymond J, Cariaga, Kathleen, Freeman, Barbie, Meerow, Alan W, Brown, J. Steven, Kuhn, David N

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