Multi-omics of human plasma reveals molecular features of dysregulated inflammation and accelerated aging in schizophrenia von Campeau, Anaamika, Mills, Robert H., Stevens, Toer, Rossitto, Leigh-Ana, Meehan, Michael, Dorrestein, Pieter, Daly, Rebecca, Nguyen, Tanya T., Gonzalez, David J., Jeste, Dilip V., Hook, Vivian

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Location-specific signatures of Crohn's disease at a multi-omics scale von Gonzalez, Carlos G, Mills, Robert H, Zhu, Qiyun, Sauceda, Consuelo, Knight, Rob, Dulai, Parambir S, Gonzalez, David J

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Organ-level protein networks as a reference for the host effects of the microbiome von Mills, Robert H, Wozniak, Jacob M, Vrbanac, Alison, Campeau, Anaamika, Chassaing, Benoit, Gewirtz, Andrew, Knight, Rob, Gonzalez, David J

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Neutrophilic proteolysis in the cystic fibrosis lung correlates with a pathogenic microbiome von Quinn, Robert A, Adem, Sandeep, Mills, Robert H, Comstock, William, DeRight Goldasich, Lindsay, Humphrey, Gregory, Aksenov, Alexander A, Melnik, Alexei V, da Silva, Ricardo, Ackermann, Gail, Bandeira, Nuno, Gonzalez, David J, Conrad, Doug, O'Donoghue, Anthony J, Knight, Rob, Dorrestein, Pieter C

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Antimicrobials from a feline commensal bacterium inhibit skin infection by drug-resistant S. pseudintermedius von O'Neill, Alan M, Worthing, Kate A, Kulkarni, Nikhil, Li, Fengwu, Nakatsuji, Teruaki, McGrosso, Dominic, Mills, Robert H, Kalla, Gayathri, Cheng, Joyce Y, Norris, Jacqueline M, Pogliano, Kit, Pogliano, Joe, Gonzalez, David J, Gallo, Richard L

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Evaluating Metagenomic Prediction of the Metaproteome in a 4.5-Year Study of a Patient with Crohn's Disease von Mills, Robert H, Vázquez-Baeza, Yoshiki, Zhu, Qiyun, Jiang, Lingjing, Gaffney, James, Humphrey, Greg, Smarr, Larry, Knight, Rob, Gonzalez, David J

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The Host-Microbiome Response to Hyperbaric Oxygen Therapy in Ulcerative Colitis Patients von Gonzalez, Carlos G., Mills, Robert H., Kordahi, Melissa C., Carrillo-Terrazas, Marvic, Secaira-Morocho, Henry, Widjaja, Christella E., Tsai, Matthew S., Mittal, Yash, Yee, Brian A., Vargas, Fernando, Weldon, Kelly, Gauglitz, Julia M., Delaroque, Clara, Sauceda, Consuelo, Rossitto, Leigh-Ana, Ackermann, Gail, Humphrey, Gregory, Swafford, Austin D., Siegel, Corey A., Buckey, Jay C., Raffals, Laura E., Sadler, Charlotte, Lindholm, Peter, Fisch, Kathleen M., Valaseck, Mark, Suriawinata, Arief, Yeo, Gene W., Ghosh, Pradipta, Chang, John T., Chu, Hiutung, Dorrestein, Pieter, Zhu, Qiyun, Chassaing, Benoit, Knight, Rob, Gonzalez, David J., Dulai, Parambir S.

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Evaluating Organism-Wide Changes in the Metabolome and Microbiome following a Single Dose of Antibiotic von Vrbanac, Alison, Patras, Kathryn A., Jarmusch, Alan K., Mills, Robert H., Shing, Samuel R., Quinn, Robert A., Vargas, Fernando, Gonzalez, David J., Dorrestein, Pieter C., Knight, Rob, Nizet, Victor

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Identification of a Human Skin Commensal Bacterium that Selectively Kills Cutibacterium acnes von O’Neill, Alan M., Nakatsuji, Teruaki, Hayachi, Asumi, Williams, Michael R., Mills, Robert H., Gonzalez, David J., Gallo, Richard L.

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Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Signatures von Wozniak, Jacob M., Mills, Robert H., Olson, Joshua, Caldera, J.R., Sepich-Poore, Gregory D., Carrillo-Terrazas, Marvic, Tsai, Chih-Ming, Vargas, Fernando, Knight, Rob, Dorrestein, Pieter C., Liu, George Y., Nizet, Victor, Sakoulas, George, Rose, Warren, Gonzalez, David J.

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Multi-level analysis of the gut–brain axis shows autism spectrum disorder-associated molecular and microbial profiles von Morton, James T., Jin, Dong-Min, Mills, Robert H., Shao, Yan, Rahman, Gibraan, McDonald, Daniel, Zhu, Qiyun, Balaban, Metin, Jiang, Yueyu, Cantrell, Kalen, Gonzalez, Antonio, Carmel, Julie, Frankiensztajn, Linoy Mia, Martin-Brevet, Sandra, Berding, Kirsten, Needham, Brittany D., Zurita, María Fernanda, David, Maude, Averina, Olga V., Kovtun, Alexey S., Noto, Antonio, Mussap, Michele, Wang, Mingbang, Frank, Daniel N., Li, Ellen, Zhou, Wenhao, Fanos, Vassilios, Danilenko, Valery N., Wall, Dennis P., Cárdenas, Paúl, Baldeón, Manuel E., Jacquemont, Sébastien, Koren, Omry, Elliott, Evan, Xavier, Ramnik J., Mazmanian, Sarkis K., Knight, Rob, Gilbert, Jack A., Donovan, Sharon M., Lawley, Trevor D., Carpenter, Bob, Bonneau, Richard, Taroncher-Oldenburg, Gaspar

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Multi-omics analyses of the ulcerative colitis gut microbiome link Bacteroides vulgatus proteases with disease severity von Mills, Robert H., Dulai, Parambir S., Vázquez-Baeza, Yoshiki, Sauceda, Consuelo, Daniel, Noëmie, Gerner, Romana R., Batachari, Lakshmi E., Malfavon, Mario, Zhu, Qiyun, Weldon, Kelly, Humphrey, Greg, Carrillo-Terrazas, Marvic, Goldasich, Lindsay DeRight, Bryant, MacKenzie, Raffatellu, Manuela, Quinn, Robert A., Gewirtz, Andrew T., Chassaing, Benoit, Chu, Hiutung, Sandborn, William J., Dorrestein, Pieter C., Knight, Rob, Gonzalez, David J.

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Urinary Exosomes Identify Inflammatory Pathways in Vancomycin Associated Acute Kidney Injury von Awdishu, Linda, Le, Amy, Amato, Jordan, Jani, Vidhyut, Bal, Soma, Mills, Robert H, Carrillo-Terrazas, Marvic, Gonzalez, David J, Tolwani, Ashita, Acharya, Anjali, Cerda, Jorge, Joy, Melanie S, Nicoletti, Paola, Macedo, Etienne, Vaingankar, Sucheta, Mehta, Ravindra, RamachandraRao, Satish P, On Behalf Of The Direct Investigators

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Mass Spectrometry-Based Visualization of Molecules Associated with Human Habitats von Petras, Daniel, Nothias, Louis-Félix, Quinn, Robert A, Alexandrov, Theodore, Bandeira, Nuno, Bouslimani, Amina, Castro-Falcón, Gabriel, Chen, Liangyu, Dang, Tam, Floros, Dimitrios J, Hook, Vivian, Garg, Neha, Hoffner, Nicole, Jiang, Yike, Kapono, Clifford A, Koester, Irina, Knight, Rob, Leber, Christopher A, Ling, Tie-Jun, Luzzatto-Knaan, Tal, McCall, Laura-Isobel, McGrath, Aaron P, Meehan, Michael J, Merritt, Jonathan K, Mills, Robert H, Morton, Jamie, Podvin, Sonia, Protsyuk, Ivan, Purdy, Trevor, Satterfield, Kendall, Searles, Stephen, Shah, Sahil, Shires, Sarah, Steffen, Dana, White, Margot, Todoric, Jelena, Tuttle, Robert, Wojnicz, Aneta, Sapp, Valerie, Vargas, Fernando, Yang, Jin, Zhang, Chao, Dorrestein, Pieter C

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Associations of the Fecal Microbial Proteome Composition and Proneness to Diet-induced Obesity[S] von Tran, Hao Q., Mills, Robert H., Peters, Nicole V., Holder, Mary K., de Vries, Geert J., Knight, Rob, Chassaing, Benoit, Gonzalez, David J., Gewirtz, Andrew T.

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Peptide Inhibitors Targeting the Neisseria gonorrhoeae Pivotal Anaerobic Respiration Factor AniA von Sikora, Aleksandra E, Mills, Robert H, Weber, Jacob V, Hamza, Adel, Passow, Bryan W, Romaine, Andrew, Williamson, Zachary A, Reed, Robert W, Zielke, Ryszard A, Korotkov, Konstantin V

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Defining Host Responses during Systemic Bacterial Infection through Construction of a Murine Organ Proteome Atlas von Lapek, John D., Mills, Robert H., Wozniak, Jacob M., Campeau, Anaamika, Fang, Ronnie H., Wei, Xiaoli, van de Groep, Kirsten, Perez-Lopez, Araceli, van Sorge, Nina M., Raffatellu, Manuela, Knight, Rob, Zhang, Liangfang, Gonzalez, David J.

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Multidimensional Proteome Profiling of Blood-Brain Barrier Perturbation by Group B Streptococcus von Campeau, Anaamika, Mills, Robert H., Blanchette, Marie, Bajc, Kaja, Malfavon, Mario, Munji, Roeben N., Deng, Liwen, Hancock, Bryan, Patras, Kathryn A., Olson, Joshua, Nizet, Victor, Daneman, Richard, Doran, Kelly, Gonzalez, David J.

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Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Molecular Signatures von Wozniak, Jacob M., Mills, Robert H., Olson, Joshua, Caldera, JR, Sepich-Poore, Gregory D., Carrillo-Terrazas, Marvic, Tsai, Chih-Ming, Vargas, Fernando, Knight, Rob, Dorrestein, Pieter C., Liu, George Y., Nizet, Victor, Sakoulas, George, Rose, Warren, Gonzalez, David J.

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Mass Spectrometry-Based 3D Cartography Displays the Chemistry Associated with Modern Human Habitats von Petras, Daniel, Nothias, Louis-Félix, Quinn, Robert A., Alexandrov, Theodore, Bandeira, Nuno, Bouslimani, Amina, Castro-Falcón, Gabriel, Chen, Liangyu, Dang, Tam, Floros, Dimitrios J, Hook, Vivian, Garg, Neha, Hoffner, Nicole, Jiang, Yike, Kapono, Clifford A., Koester, Irina, Knight, Rob, Leber, Christopher A, Ling, Tie-Jun, Luzzatto-Knaan, Tal, McCall, Laura-Isobel, McGrath, Aaron P., Meehan, Michael J., Merritt, Jonathan K., Mills, Robert H., Morton, Jamie, Podvin, Sonia, Protsyuk, Ivan, Purdy, Trevor, Satterfield, Kendall, Searles, Stephen, Shah, Sahil, Shires, Sarah, Steffen, Dana, White, Margot, Todoric, Jelena, Tuttle, Robert, Wojnicz, Aneta, Sapp, Valerie, Vargas, Fernando, Yang, Jin, Zhang, Chao, Dorrestein, Pieter C.

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