PIPETS: a statistically informed, gene-annotation agnostic analysis method to study bacterial termination using 3'-end sequencing von Furumo, Quinlan, Meyer, Michelle M

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RNA cis-regulators are important for Streptococcus pneumoniae in vivo success von Warrier, Indu, Perry, Ariana, Hubbell, Sara M, Eichelman, Matthew, van Opijnen, Tim, Meyer, Michelle M

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Comparative Metatranscriptomics of Periodontitis Supports a Common Polymicrobial Shift in Metabolic Function and Identifies Novel Putative Disease-Associated ncRNAs von Ram-Mohan, Nikhil, Meyer, Michelle M

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The role of mRNA structure in bacterial translational regulation von Meyer, Michelle M.

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Integrating chemical footprinting data into RNA secondary structure prediction von Zarringhalam, Kourosh, Meyer, Michelle M, Dotu, Ivan, Chuang, Jeffrey H, Clote, Peter

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Regulatory context drives conservation of glycine riboswitch aptamers von Crum, Matt, Ram-Mohan, Nikhil, Meyer, Michelle M

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Most RNAs regulating ribosomal protein biosynthesis in Escherichia coli are narrowly distributed to Gammaproteobacteria von Fu, Yang, Deiorio-Haggar, Kaila, Anthony, Jon, Meyer, Michelle M

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The Transcriptional landscape of Streptococcus pneumoniae TIGR4 reveals a complex operon architecture and abundant riboregulation critical for growth and virulence von Warrier, Indu, Ram-Mohan, Nikhil, Zhu, Zeyu, Hazery, Ariana, Echlin, Haley, Rosch, Jason, Meyer, Michelle M, van Opijnen, Tim

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Exceptional structured noncoding RNAs revealed by bacterial metagenome analysis von Weinberg, Zasha, Perreault, Jonathan, Meyer, Michelle M., Breaker, Ronald R.

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Recognizing RNA structural motifs in HT-SELEX data for ribosomal protein S15 von Pei, Shermin, Slinger, Betty L, Meyer, Michelle M

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Complete RNA inverse folding: computational design of functional hammerhead ribozymes von Dotu, Ivan, Garcia-Martin, Juan Antonio, Slinger, Betty L, Mechery, Vinodh, Meyer, Michelle M, Clote, Peter

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Co-evolution of Bacterial Ribosomal Protein S15 with Diverse mRNA Regulatory Structures von Slinger, Betty L, Newman, Hunter, Lee, Younghan, Pei, Shermin, Meyer, Michelle M

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Revisiting the Relationships Between Genomic G + C Content, RNA Secondary Structures, and Optimal Growth Temperature von Meyer, Michelle M.

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Confirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteria von Meyer, Michelle M, Roth, Adam, Chervin, Stephanie M, Garcia, George A, Breaker, Ronald R

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Debating tRNA Origins von Meyer, Michelle M.

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Heterochromatin assembly and transcriptome repression by Set1 in coordination with a class II histone deacetylase von Lorenz, David R, Meyer, Lauren F, Grady, Patrick J R, Meyer, Michelle M, Cam, Hugh P

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Challenges of ligand identification for riboswitch candidates von Meyer, Michelle M, Hammond, Ming C, Salinas, Yasmmyn, Roth, Adam, Sudarsan, Narasimhan, Breaker, Ronald R

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Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique' von Meyer, Michelle M, Ames, Tyler D, Smith, Daniel P, Weinberg, Zasha, Schwalbach, Michael S, Giovannoni, Stephen J, Breaker, Ronald R

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On the Conservative Nature of Intragenic Recombination von Drummond, D. Allan, Silberg, Jonathan J., Meyer, Michelle M., Wilke, Claus O., Arnold, Frances H., Levitt, Michael

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rRNA Mimicry in RNA Regulation of Gene Expression von Meyer, Michelle M

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