Re-analysis of a Genome-Wide Gene-By-Environment Interaction Study of Case Parent Trios, Adjusted for Population Stratification von Ratnasekera, Pulindu, McNeney, Brad

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Inference of gene-environment interaction from heterogeneous case-parent trios von Ratnasekera, Pulindu, Graham, Jinko, McNeney, Brad

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LDheatmap : An R Function for Graphical Display of Pairwise Linkage Disequilibria Between Single Nucleotide Polymorphisms von Shin, Ji-Hyung, Blay, Sigal, Graham, Jinko, McNeney, Brad

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elrm : Software Implementing Exact-like Inference for Logistic Regression Models von Zamar, David, McNeney, Brad, Graham, Jinko

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hapassoc : Software for Likelihood Inference of Trait Associations with SNP Haplotypes and Other Attributes von Burkett, Kelly, Graham, Jinko, McNeney, Brad

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Cell culture-induced aberrant methylation of the imprinted IG DMR in human lymphoblastoid cell lines von Saferali, Aabida, Grundberg, Elin, Berlivet, Soizik, Beauchemin, Hugues, Morcos, Lisanne, Polychronakos, Constantin, Pastinen, Tomi, Graham, Jinko, McNeney, Brad, Naumova, Anna K.

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Penalized Logistic Regression Analysis for Genetic Association Studies of Binary Phenotypes von Yu, Ying, Chen, Siyuan, Jones, Samantha Jean, Hoque, Rawnak, Vishnyakova, Olga, Brooks-Wilson, Angela, McNeney, Brad

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Sampletrees and Rsampletrees: sampling gene genealogies conditional on SNP genotype data von Burkett, Kelly M, McNeney, Brad, Graham, Jinko

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A statistical approach to high-throughput screening of predicted orthologs von Min, Jeong Eun, Whiteside, Matthew D., Brinkman, Fiona S.L., McNeney, Brad, Graham, Jinko

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The Contribution Plot: Decomposition and Graphical Display of the RV Coefficient, with Application to Genetic and Brain Imaging Biomarkers of Alzheimer’s Disease von Choi, JinCheol, Lu, Donghuan, Beg, Mirza Faisal, Graham, Jinko, McNeney, Brad

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CrypticIBDcheck: an R package for checking cryptic relatedness in nominally unrelated individuals von Nembot-Simo, Annick, Graham, Jinko, McNeney, Brad

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Markov chain Monte Carlo sampling of gene genealogies conditional on unphased SNP genotype data von Burkett, Kelly M, McNeney, Brad, Graham, Jinko

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Large Sample Theory for Semiparametric Regression Models with Two-Phase, Outcome Dependent Sampling von Breslow, Norman, McNeney, Brad, Wellner, Jon A.

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A data-smoothing approach to explore and test gene-environment interaction in case-parent trios von Shin, Ji-Hyung, Infante-Rivard, Claire, McNeney, Brad, Graham, Jinko

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5-year reoperation rates after different types of lumbar spine surgery von Malter, A D, McNeney, B, Loeser, J D, Deyo, R A

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Using Gene Genealogies to Detect Rare Variants Associated with Complex Traits von Burkett, Kelly M., McNeney, Brad, Graham, Jinko, Greenwood, Celia M.T.

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On the Use of Allelic Transmission Rates for Assessing Gene‐by‐Environment Interaction in Case‐Parent Trios von Shin, Ji‐Hyung, McNeney, Brad, Graham, Jinko

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Adjusting for Spurious Gene-by-Environment Interaction Using Case-Parent Triads von Shin, Ji-Hyung, Infante-Rivard, Claire, Graham, Jinko, McNeney, Brad

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Stepwise detection of recombination breakpoints in sequence alignments von Graham, Jinko, McNeney, Brad, Seillier-Moiseiwitsch, Françoise

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Gene genealogies for genetic association mapping, with application to Crohn's disease von Burkett, Kelly M, Greenwood, Celia M T, McNeney, Brad, Graham, Jinko

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