CX3CR1 + mononuclear phagocytes control immunity to intestinal fungi von Leonardi, Irina, Li, Xin, Semon, Alexa, Li, Dalin, Doron, Itai, Putzel, Gregory, Bar, Agnieszka, Prieto, Daniel, Rescigno, Maria, McGovern, Dermot P B, Pla, Jesus, Iliev, Iliyan D

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Gene-microbiota interactions contribute to the pathogenesis of inflammatory bowel disease von Chu, Hiutung, Khosravi, Arya, Kusumawardhani, Indah P., Kwon, Alice H. K., Vasconcelos, Anilton C., Cunha, Larissa D., Mayer, Anne E., Shen, Yue, Wu, Wei-Li, Kambal, Amal, Targan, Stephan R., Xavier, Ramnik J., Ernst, Peter B., Green, Douglas R., McGovern, Dermot P. B., Virgin, Herbert W., Mazmanian, Sarkis K.

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Interactions Between Commensal Fungi and the C-Type Lectin Receptor Dectin-1 Influence Colitis von Iliev, Iliyan D., Funari, Vincent A., Taylor, Kent D., Nguyen, Quoclinh, Reyes, Christopher N., Strom, Samuel P., Brown, Jordan, Becker, Courtney A., Fleshner, Phillip R., Dubinsky, Marla, Rotter, Jerome I., Wang, Hanlin L., McGovern, Dermot P. B., Brown, Gordon D., Underhill, David M.

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Microbiotas from Humans with Inflammatory Bowel Disease Alter the Balance of Gut Th17 and RORγt+ Regulatory T Cells and Exacerbate Colitis in Mice von Britton, Graham J., Contijoch, Eduardo J., Mogno, Ilaria, Vennaro, Olivia H., Llewellyn, Sean R., Ng, Ruby, Li, Zhihua, Mortha, Arthur, Merad, Miriam, Das, Anuk, Gevers, Dirk, McGovern, Dermot P.B., Singh, Namita, Braun, Jonathan, Jacobs, Jonathan P., Clemente, Jose C., Grinspan, Ari, Sands, Bruce E., Colombel, Jean-Frederic, Dubinsky, Marla C., Faith, Jeremiah J.

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Myeloid ATG16L1 Facilitates Host-Bacteria Interactions in Maintaining Intestinal Homeostasis von Zhang, Hong, Zheng, Libo, McGovern, Dermot P B, Hamill, Ariel M, Ichikawa, Ryan, Kanazawa, Yoshitake, Luu, Justin, Kumagai, Kotaro, Cilluffo, Marianne, Fukata, Masayuki, Targan, Stephan R, Underhill, David M, Zhang, Xiaolan, Shih, David Q

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A Systematic Review of Monogenic Inflammatory Bowel Disease von Nambu, Ryusuke, Warner, Neil, Mulder, Daniel J., Kotlarz, Daniel, McGovern, Dermot P.B., Cho, Judy, Klein, Christoph, Snapper, Scott B., Griffiths, Anne M., Iwama, Itaru, Muise, Aleixo M.

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A common missense variant in NUDT15 confers susceptibility to thiopurine-induced leukopenia von Yang, Suk-Kyun, Hong, Myunghee, Baek, Jiwon, Choi, Hyunchul, Zhao, Wanting, Jung, Yusun, Haritunians, Talin, Ye, Byong Duk, Kim, Kyung-Jo, Park, Sang Hyoung, Park, Soo-Kyung, Yang, Dong-Hoon, Dubinsky, Marla, Lee, Inchul, McGovern, Dermot P B, Liu, Jianjun, Song, Kyuyoung

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Meta-analysis of gene expression disease signatures in colonic biopsy tissue from patients with ulcerative colitis von Linggi, Bryan, Jairath, Vipul, Zou, Guangyong, Shackelton, Lisa M., McGovern, Dermot P. B., Salas, Azucena, Verstockt, Bram, Silverberg, Mark S., Nayeri, Shadi, Feagan, Brian G., Vande Casteele, Niels

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Reprograming of gut microbiome energy metabolism by the FUT2 Crohn’s disease risk polymorphism von Tong, Maomeng, McHardy, Ian, Ruegger, Paul, Goudarzi, Maryam, Kashyap, Purna C, Haritunians, Talin, Li, Xiaoxiao, Graeber, Thomas G, Schwager, Emma, Huttenhower, Curtis, Fornace, Albert J, Sonnenburg, Justin L, McGovern, Dermot PB, Borneman, James, Braun, Jonathan

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Prevalence and Clinical Features of Inflammatory Bowel Diseases Associated With Monogenic Variants, Identified by Whole-Exome Sequencing in 1000 Children at a Single Center von Crowley, Eileen, Warner, Neil, Pan, Jie, Khalouei, Sam, Elkadri, Abdul, Fiedler, Karoline, Foong, Justin, Turinsky, Andrei L., Bronte-Tinkew, Dana, Zhang, Shiqi, Hu, Jamie, Tian, David, Li, Dalin, Horowitz, Julie, Siddiqui, Iram, Upton, Julia, Roifman, Chaim M., Church, Peter C., Wall, Donna A., Ramani, Arun K., Kotlarz, Daniel, Klein, Christoph, Uhlig, Holm, Snapper, Scott B., Gonzaga-Jauregui, Claudia, Paterson, Andrew D., McGovern, Dermot P.B., Brudno, Michael, Walters, Thomas D., Griffiths, Anne M., Muise, Aleixo M.

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A modular organization of the human intestinal mucosal microbiota and its association with inflammatory bowel disease von Tong, Maomeng, Li, Xiaoxiao, Wegener Parfrey, Laura, Roth, Bennett, Ippoliti, Andrew, Wei, Bo, Borneman, James, McGovern, Dermot P B, Frank, Daniel N, Li, Ellen, Horvath, Steve, Knight, Rob, Braun, Jonathan

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Comparative Persistence of Non-tumor Necrosis Factor (TNF) vs. TNF Antagonists for Post-operative Prophylaxis in Crohn’s Disease (CD) von Gu, Phillip, Dube, Shishir, Lee, YooJin, Yang, Shaohong, Li, Dalin, Haritunians, Talin, Vasiliauskas, Eric, Bonthala, Niru, Syal, Gaurav, Yarur, Andres, Ziring, David, Targan, Stephan, Rabizadeh, Shervin, Melmed, Gil Y., Fleshner, Phillip, McGovern, Dermot P. B.

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A Paratope-Enhanced Method to Determine Breadth and Depth TCR Clonal Metrics of the Private Human T-Cell Vaccine Response after SARS-CoV-2 Vaccination von Li, Dalin, Pavlovitch-Bedzyk, Ana Jimena, Ebinger, Joseph E, Khan, Abdul, Hamideh, Mohamed, Merchant, Akil, Figueiredo, Jane C, Cheng, Susan, Davis, Mark M, McGovern, Dermot P B, Melmed, Gil Y, Xu, Alexander M, Braun, Jonathan

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Crohn's disease in endoscopic remission, obesity, and cases of high genetic risk demonstrates overlapping shifts in the colonic mucosal-luminal interface microbiome von Jacobs, Jonathan P, Goudarzi, Maryam, Lagishetty, Venu, Li, Dalin, Mak, Tytus, Tong, Maomeng, Ruegger, Paul, Haritunians, Talin, Landers, Carol, Fleshner, Philip, Vasiliauskas, Eric, Ippoliti, Andrew, Melmed, Gil, Shih, David, Targan, Stephan, Borneman, James, Fornace, Jr, Albert J, McGovern, Dermot P B, Braun, Jonathan

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Association of Systemic Sclerosis With a Unique Colonic Microbial Consortium von Volkmann, Elizabeth R., Chang, Yu‐Ling, Barroso, Nashla, Furst, Daniel E., Clements, Philip J., Gorn, Alan H., Roth, Bennett E., Conklin, Jeffrey L., Getzug, Terri, Borneman, James, McGovern, Dermot P. B., Tong, Maomeng, Jacobs, Jonathan P., Braun, Jonathan

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Dynamics of metatranscription in the inflammatory bowel disease gut microbiome von Schirmer, Melanie, Franzosa, Eric A., Lloyd-Price, Jason, McIver, Lauren J., Schwager, Randall, Poon, Tiffany W., Ananthakrishnan, Ashwin N., Andrews, Elizabeth, Barron, Gildardo, Lake, Kathleen, Prasad, Mahadev, Sauk, Jenny, Stevens, Betsy, Wilson, Robin G., Braun, Jonathan, Denson, Lee A., Kugathasan, Subra, McGovern, Dermot P. B., Vlamakis, Hera, Xavier, Ramnik J., Huttenhower, Curtis

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Fucosyltransferase 2 (FUT2) non-secretor status is associated with Crohn's disease von McGovern, Dermot P.B., Jones, Michelle R., Taylor, Kent D., Marciante, Kristin, Yan, Xiaofei, Dubinsky, Marla, Ippoliti, Andy, Vasiliauskas, Eric, Berel, Dror, Derkowski, Carrie, Dutridge, Deb, Fleshner, Phil, Shih, David Q., Melmed, Gil, Mengesha, Emebet, King, Lily, Pressman, Sheila, Haritunians, Talin, Guo, Xiuqing, Targan, Stephan R., Rotter, Jerome I.

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Genetics of Inflammatory Bowel Diseases von McGovern, Dermot P.B, Kugathasan, Subra, Cho, Judy H

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Precision medicine in monogenic inflammatory bowel disease: proposed mIBD REPORT standards von Uhlig, Holm H., Booth, Claire, Cho, Judy, Dubinsky, Marla, Griffiths, Anne M., Grimbacher, Bodo, Hambleton, Sophie, Huang, Ying, Jones, Kelsey, Kammermeier, Jochen, Kanegane, Hirokazu, Koletzko, Sibylle, Kotlarz, Daniel, Klein, Christoph, Lenardo, Michael J., Lo, Bernice, McGovern, Dermot P. B., Özen, Ahmet, de Ridder, Lissy, Ruemmele, Frank, Shouval, Dror S., Snapper, Scott B., Travis, Simon P., Turner, Dan, Wilson, David C., Muise, Aleixo M.

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The role of admixture in the rare variant contribution to inflammatory bowel disease von Astore, Courtney, Sharma, Shivam, Nagpal, Sini, Cutler, David J, Rioux, John D, Cho, Judy H, McGovern, Dermot P B, Brant, Steven R, Kugathasan, Subra, Jordan, I King, Gibson, Greg

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