Microbial Experimental Evolution – a proving ground for evolutionary theory and a tool for discovery von McDonald, Michael J

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Sex speeds adaptation by altering the dynamics of molecular evolution von McDonald, Michael J., Rice, Daniel P., Desai, Michael M.

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The dynamics of molecular evolution over 60,000 generations von Good, Benjamin H., McDonald, Michael J., Barrick, Jeffrey E., Lenski, Richard E., Desai, Michael M.

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Diverse hydrogen production and consumption pathways influence methane production in ruminants von Greening, Chris, Geier, Renae, Wang, Cecilia, Woods, Laura C., Morales, Sergio E., McDonald, Michael J., Rushton-Green, Rowena, Morgan, Xochitl C., Koike, Satoshi, Leahy, Sinead C., Kelly, William J., Cann, Isaac, Attwood, Graeme T., Cook, Gregory M., Mackie, Roderick I.

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Fitness cost of mcr-1-mediated polymyxin resistance in Klebsiella pneumoniae von Nang, Sue C, Morris, Faye C, McDonald, Michael J, Han, Mei-Ling, Wang, Jiping, Strugnell, Richard A, Velkov, Tony, Li, Jian

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Clusters of nucleotide substitutions and insertion/deletion mutations are associated with repeat sequences von McDonald, Michael J, Wang, Wei-Chi, Huang, Hsien-Da, Leu, Jun-Yi

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Phenotypic and molecular evolution across 10,000 generations in laboratory budding yeast populations von Johnson, Milo S, Gopalakrishnan, Shreyas, Goyal, Juhee, Dillingham, Megan E, Bakerlee, Christopher W, Humphrey, Parris T, Jagdish, Tanush, Jerison, Elizabeth R, Kosheleva, Katya, Lawrence, Katherine R, Min, Jiseon, Moulana, Alief, Phillips, Angela M, Piper, Julia C, Purkanti, Ramya, Rego-Costa, Artur, McDonald, Michael J, Nguyen Ba, Alex N, Desai, Michael M

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The Evolution of Low Mutation Rates in Experimental Mutator Populations of Saccharomyces cerevisiae von McDonald, Michael J., Hsieh, Yu-Ying, Yu, Yen-Hsin, Chang, Shang-Lin, Leu, Jun-Yi

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Coevolution with bacteria drives the evolution of aerobic fermentation in Lachancea kluyveri von Zhou, Nerve, Swamy, Krishna B S, Leu, Jun-Yi, McDonald, Michael J, Galafassi, Silvia, Compagno, Concetta, Piškur, Jure

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Crowded growth leads to the spontaneous evolution of semistable coexistence in laboratory yeast populations von Frenkel, Evgeni M., McDonald, Michael J., Van Dyken, J. David, Kosheleva, Katya, Lang, Gregory I., Desai, Michael M.

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The evolutionary mechanism of non-carbapenemase carbapenem-resistant phenotypes in Klebsiella spp von Rosas, Natalia C, Wilksch, Jonathan, Barber, Jake, Li, Jiahui, Wang, Yanan, Sun, Zhewei, Rocker, Andrea, Webb, Chaille T, Perlaza-Jiménez, Laura, Stubenrauch, Christopher J, Dhanasekaran, Vijaykrishna, Song, Jiangning, Taiaroa, George, Davies, Mark, Strugnell, Richard A, Bao, Qiyu, Zhou, Tieli, McDonald, Michael J, Lithgow, Trevor

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Horizontal gene transfer potentiates adaptation by reducing selective constraints on the spread of genetic variation von Woods, Laura C., Gorrell, Rebecca J., Taylor, Frank, Connallon, Tim, Kwok, Terry, McDonald, Michael J.

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Ethical bioprospecting and microbial assessments for sustainable solutions to the AMR crisis von Cartledge, Kayla, Short, Francesca L, Hall, Alex, Lambert, Karen, McDonald, Michael J, Lithgow, Trevor

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Adaptive evolution of genomically recoded Escherichia coli von Wannier, Timothy M., Kunjapur, Aditya M., Rice, Daniel P., McDonald, Michael J., Desai, Michael M., Church, George M.

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Long-term experimental evolution decouples size and production costs in Escherichia coli von Marshall, Dustin J, Malerba, Martino, Lines, Thomas, Sezmis, Aysha L, Hasan, Chowdhury M, Lenski, Richard E, McDonald, Michael J

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Recombination resolves the cost of horizontal gene transfer in experimental populations of Helicobacter pylori von Nguyen, An N T, Woods, Laura C, Gorrell, Rebecca, Ramanan, Shamitraa, Kwok, Terry, McDonald, Michael J

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Horizontal Gene Transfer, Fitness Costs and Mobility Shape the Spread of Antibiotic Resistance Genes into Experimental Populations of Acinetobacter Baylyi von Sezmis, Aysha L, Woods, Laura C, Peleg, Anton Y, McDonald, Michael J

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Bacteriophages evolve enhanced persistence to a mucosal surface von Chin, Wai Hoe, Kett, Ciaren, Cooper, Oren, Müseler, Deike, Zhang, Yaqi, Bamert, Rebecca S, Patwa, Ruzeen, Woods, Laura C, Devendran, Citsabehsan, Korneev, Denis, Tiralongo, Joe, Lithgow, Trevor, McDonald, Michael J, Neild, Adrian, Barr, Jeremy J

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Polymyxin dose tunes the evolutionary dynamics of resistance in multidrug-resistant Acinetobacter baumannii von Zhao, Jinxin, Zhu, Yan, Lin, Yu-Wei, Yu, Heidi, Wickremasinghe, Hasini, Han, Jiru, Velkov, Tony, McDonald, Michael J., Li, Jian

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The evolution of coexistence from competition in experimental co-cultures of Escherichia coli and Saccharomyces cerevisiae von Barber, Jake N., Sezmis, Aysha L., Woods, Laura C., Anderson, Trenton D., Voss, Jasmyn M., McDonald, Michael J.

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