Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples von Matranga, Christian B, Andersen, Kristian G, Winnicki, Sarah, Busby, Michele, Gladden, Adrianne D, Tewhey, Ryan, Stremlau, Matthew, Berlin, Aaron, Gire, Stephen K, England, Eleina, Moses, Lina M, Mikkelsen, Tarjei S, Odia, Ikponmwonsa, Ehiane, Philomena E, Folarin, Onikepe, Goba, Augustine, Kahn, S Humarr, Grant, Donald S, Honko, Anna, Hensley, Lisa, Happi, Christian, Garry, Robert F, Malboeuf, Christine M, Birren, Bruce W, Gnirke, Andreas, Levin, Joshua Z, Sabeti, Pardis C

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Capturing sequence diversity in metagenomes with comprehensive and scalable probe design von Metsky, Hayden C., Siddle, Katherine J., Gladden-Young, Adrianne, Qu, James, Yang, David K., Brehio, Patrick, Goldfarb, Andrew, Piantadosi, Anne, Wohl, Shirlee, Carter, Amber, Lin, Aaron E., Barnes, Kayla G., Tully, Damien C., Corleis, Bjӧrn, Hennigan, Scott, Barbosa-Lima, Giselle, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Garcia, Kimberly F., Parham, Leda A., Odia, Ikponmwosa, Eromon, Philomena, Folarin, Onikepe A., Goba, Augustine, Simon-Lorière, Etienne, Hensley, Lisa, Balmaseda, Angel, Harris, Eva, Kwon, Douglas S., Allen, Todd M., Runstadler, Jonathan A., Smole, Sandra, Bozza, Fernando A., Souza, Thiago M. L., Isern, Sharon, Michael, Scott F., Lorenzana, Ivette, Gehrke, Lee, Bosch, Irene, Ebel, Gregory, Grant, Donald S., Happi, Christian T., Park, Daniel J., Gnirke, Andreas, Sabeti, Pardis C., Matranga, Christian B.

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Chikungunya Arthritis Mechanisms in the Americas: A Cross-Sectional Analysis of Chikungunya Arthritis Patients Twenty-Two Months After Infection Demonstrating No Detectable Viral P... von Chang, Aileen Y, Martins, Karen A O, Encinales, Liliana, Reid, St Patrick, Acuña, Marlon, Encinales, Carlos, Matranga, Christian B, Pacheco, Nelly, Cure, Carlos, Shukla, Bhavarth, Ruiz Arteta, Teofilo, Amdur, Richard, Cazares, Lisa H, Gregory, Melissa, Ward, Michael D, Porras, Alexandra, Rico Mendoza, Alejandro, Dong, Lian, Kenny, Tara, Brueggemann, Ernie, Downey, Lydia G, Kamalapathy, Priyanka, Lichtenberger, Paola, Falls, Orlando, Simon, Gary L, Bethony, Jeffrey M, Firestein, Gary S

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Rapid Detection of Powassan Virus in a Patient With Encephalitis by Metagenomic Sequencing von Piantadosi, Anne, Kanjilal, Sanjat, Ganesh, Vijay, Khanna, Arjun, Hyle, Emily P, Rosand, Jonathan, Bold, Tyler, Metsky, Hayden C, Lemieux, Jacob, Leone, Michael J, Freimark, Lisa, Matranga, Christian B, Adams, Gordon, McGrath, Graham, Zamirpour, Siavash, Telford, 3rd, Sam, Rosenberg, Eric, Cho, Tracey, Frosch, Matthew P, Goldberg, Marcia B, Mukerji, Shibani S, Sabeti, Pardis C

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Combining genomics and epidemiology to track mumps virus transmission in the United States von Wohl, Shirlee, Metsky, Hayden C, Schaffner, Stephen F, Piantadosi, Anne, Burns, Meagan, Lewnard, Joseph A, Chak, Bridget, Krasilnikova, Lydia A, Siddle, Katherine J, Matranga, Christian B, Bankamp, Bettina, Hennigan, Scott, Sabina, Brandon, Byrne, Elizabeth H, McNall, Rebecca J, Shah, Rickey R, Qu, James, Park, Daniel J, Gharib, Soheyla, Fitzgerald, Susan, Barreira, Paul, Fleming, Stephen, Lett, Susan, Rota, Paul A, Madoff, Lawrence C, Yozwiak, Nathan L, MacInnis, Bronwyn L, Smole, Sandra, Grad, Yonatan H, Sabeti, Pardis C

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Discovery of novel rhabdoviruses in the blood of healthy individuals from West Africa von Stremlau, Matthew H, Andersen, Kristian G, Folarin, Onikepe A, Grove, Jessica N, Odia, Ikponmwonsa, Ehiane, Philomena E, Omoniwa, Omowunmi, Omoregie, Omigie, Jiang, Pan-Pan, Yozwiak, Nathan L, Matranga, Christian B, Yang, Xiao, Gire, Stephen K, Winnicki, Sarah, Tariyal, Ridhi, Schaffner, Stephen F, Okokhere, Peter O, Okogbenin, Sylvanus, Akpede, George O, Asogun, Danny A, Agbonlahor, Dennis E, Walker, Peter J, Tesh, Robert B, Levin, Joshua Z, Garry, Robert F, Sabeti, Pardis C, Happi, Christian T

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Evidence of Ebola Virus Replication and High Concentration in Semen of a Patient During Recovery von Barnes, Kayla G., Kindrachuk, Jason, Lin, Aaron E., Wohl, Shirlee, Qu, James, Tostenson, Samantha D., Dorman, William R., Busby, Michele, Siddle, Katherine J., Luo, Cynthia Y., Matranga, Christian B., Davey, Richard T., Sabeti, Pardis C., Chertow, Daniel S.

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Ebola Virus Epidemiology and Evolution in Nigeria von Folarin, Onikepe A., Ehichioya, Deborah, Schaffner, Stephen F., Winnicki, Sarah M., Wohl, Shirlee, Eromon, Philomena, West, Kendra L., Gladden-Young, Adrianne, Oyejide, Nicholas E., Matranga, Christian B., Deme, Awa Bineta, James, Ayorinde, Tomkins-Tinch, Christopher, Onyewurunwa, Kenneth, Ladner, Jason T., Palacios, Gustavo, Nosamiefan, Iguosadolo, Andersen, Kristian G., Omilabu, Sunday, Park, Daniel J., Yozwiak, Nathan L., Nasidi, Abdusallam, Garry, Robert F., Tomori, Oyewale, Sabeti, Pardis C., Happi, Christian T.

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Unbiased Deep Sequencing of RNA Viruses from Clinical Samples von Matranga, Christian B, Gladden-Young, Adrianne, Qu, James, Winnicki, Sarah, Nosamiefan, Dolo, Levin, Joshua Z, Sabeti, Pardis C

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Chikungunya Arthritis Mechanisms in the Americas von Chang, Aileen Y., Martins, Karen A. O., Encinales, Liliana, Reid, St. Patrick, Acuña, Marlon, Encinales, Carlos, Matranga, Christian B., Pacheco, Nelly, Cure, Carlos, Shukla, Bhavarth, Ruiz Arteta, Teofilo, Amdur, Richard, Cazares, Lisa H., Gregory, Melissa, Ward, Michael D., Porras, Alexandra, Rico Mendoza, Alejandro, Dong, Lian, Kenny, Tara, Brueggemann, Ernie, Downey, Lydia G., Kamalapathy, Priyanka, Lichtenberger, Paola, Falls, Orlando, Simon, Gary L., Bethony, Jeffrey M., Firestein, Gary S.

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Flavopiridol Induces Cell Cycle Arrest and p53-independent Apoptosis in Non-Small Cell Lung Cancer Cell Lines von SHAPIRO, G. I, KOESTNER, D. A, MATRANGA, C. B, ROLLINS, B. J

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Selective sensitization of transformed cells to flavopiridol-induced apoptosis following recruitment to S-phase von Matranga, Christian B, Shapiro, Geoffrey I

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Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak von Gire, Stephen K., Goba, Augustine, Andersen, Kristian G., Sealfon, Rachel S. G., Park, Daniel J., Kanneh, Lansana, Jalloh, Simbirie, Momoh, Mambu, Fullah, Mohamed, Dudas, Gytis, Wohl, Shirlee, Moses, Lina M., Yozwiak, Nathan L., Winnicki, Sarah, Matranga, Christian B., Malboeuf, Christine M., Qu, James, Gladden, Adrianne D., Schaffner, Stephen F., Yang, Xiao, Jiang, Pan-Pan, Nekoui, Mahan, Colubri, Andres, Coomber, Moinya Ruth, Fonnie, Mbalu, Moigboi, Alex, Gbakie, Michael, Kamara, Fatima K., Tucker, Veronica, Konuwa, Edwin, Saffa, Sidiki, Sellu, Josephine, Jalloh, Abdul Azziz, Kovoma, Alice, Koninga, James, Mustapha, Ibrahim, Kargbo, Kandeh, Foday, Momoh, Yillah, Mohamed, Kanneh, Franklyn, Robert, Willie, Massally, James L. B., Chapman, Sinéad B., Bochicchio, James, Murphy, Cheryl, Nusbaum, Chad, Young, Sarah, Birren, Bruce W., Grant, Donald S., Scheiffelin, John S., Lander, Eric S., Happi, Christian, Gevao, Sahr M., Gnirke, Andreas, Rambaut, Andrew, Garry, Robert F., Khan, S. Humarr, Sabeti, Pardis C.

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Zika virus evolution and spread in the Americas von Metsky, Hayden C., Matranga, Christian B., Wohl, Shirlee, Schaffner, Stephen F., Freije, Catherine A., Winnicki, Sarah M., West, Kendra, Qu, James, Baniecki, Mary Lynn, Gladden-Young, Adrianne, Lin, Aaron E., Tomkins-Tinch, Christopher H., Ye, Simon H., Park, Daniel J., Luo, Cynthia Y., Barnes, Kayla G., Shah, Rickey R., Chak, Bridget, Barbosa-Lima, Giselle, Delatorre, Edson, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Barcellona, Carolyn M., Porcelli, Mario C., Vasquez, Chalmers, Cannons, Andrew C., Cone, Marshall R., Hogan, Kelly N., Kopp, Edgar W., Anzinger, Joshua J., Garcia, Kimberly F., Parham, Leda A., Ramírez, Rosa M. Gélvez, Montoya, Maria C. Miranda, Rojas, Diana P., Brown, Catherine M., Hennigan, Scott, Sabina, Brandon, Scotland, Sarah, Gangavarapu, Karthik, Grubaugh, Nathan D., Oliveira, Glenn, Robles-Sikisaka, Refugio, Rambaut, Andrew, Gehrke, Lee, Smole, Sandra, Halloran, M. Elizabeth, Villar, Luis, Mattar, Salim, Lorenzana, Ivette, Cerbino-Neto, Jose, Valim, Clarissa, Degrave, Wim, Bozza, Patricia T., Gnirke, Andreas, Andersen, Kristian G., Isern, Sharon, Michael, Scott F., Bozza, Fernando A., Souza, Thiago M. L., Bosch, Irene, Yozwiak, Nathan L., MacInnis, Bronwyn L., Sabeti, Pardis C.

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Virus genomes reveal factors that spread and sustained the Ebola epidemic von Dudas, Gytis, Carvalho, Luiz Max, Bedford, Trevor, Tatem, Andrew J., Baele, Guy, Faria, Nuno R., Park, Daniel J., Ladner, Jason T., Arias, Armando, Asogun, Danny, Bielejec, Filip, Caddy, Sarah L., Cotten, Matthew, D’Ambrozio, Jonathan, Dellicour, Simon, Di Caro, Antonino, Diclaro, Joseph W., Duraffour, Sophie, Elmore, Michael J., Fakoli, Lawrence S., Faye, Ousmane, Gilbert, Merle L., Gevao, Sahr M., Gire, Stephen, Gladden-Young, Adrianne, Gnirke, Andreas, Goba, Augustine, Grant, Donald S., Haagmans, Bart L., Hiscox, Julian A., Jah, Umaru, Kugelman, Jeffrey R., Liu, Di, Lu, Jia, Malboeuf, Christine M., Mate, Suzanne, Matthews, David A., Matranga, Christian B., Meredith, Luke W., Qu, James, Quick, Joshua, Pas, Suzan D., Phan, My V. T., Pollakis, Georgios, Reusken, Chantal B., Sanchez-Lockhart, Mariano, Schaffner, Stephen F., Schieffelin, John S., Sealfon, Rachel S., Simon-Loriere, Etienne, Smits, Saskia L., Stoecker, Kilian, Thorne, Lucy, Tobin, Ekaete Alice, Vandi, Mohamed A., Watson, Simon J., West, Kendra, Whitmer, Shannon, Wiley, Michael R., Winnicki, Sarah M., Wohl, Shirlee, Wölfel, Roman, Yozwiak, Nathan L., Andersen, Kristian G., Blyden, Sylvia O., Bolay, Fatorma, Carroll, Miles W., Dahn, Bernice, Diallo, Boubacar, Formenty, Pierre, Fraser, Christophe, Gao, George F., Garry, Robert F., Goodfellow, Ian, Günther, Stephan, Happi, Christian T., Holmes, Edward C., Kargbo, Brima, Keïta, Sakoba, Kellam, Paul, Koopmans, Marion P. G., Kuhn, Jens H., Loman, Nicholas J., Magassouba, N’Faly, Naidoo, Dhamari, Nichol, Stuart T., Nyenswah, Tolbert, Palacios, Gustavo, Pybus, Oliver G., Sabeti, Pardis C., Sall, Amadou, Ströher, Ute, Wurie, Isatta, Suchard, Marc A., Lemey, Philippe, Rambaut, Andrew

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Genomic epidemiology reveals multiple introductions of Zika virus into the United States von Grubaugh, Nathan D., Ladner, Jason T., Kraemer, Moritz U. G., Dudas, Gytis, Tan, Amanda L., Gangavarapu, Karthik, Wiley, Michael R., White, Stephen, Thézé, Julien, Magnani, Diogo M., Prieto, Karla, Reyes, Daniel, Bingham, Andrea M., Paul, Lauren M., Robles-Sikisaka, Refugio, Oliveira, Glenn, Pronty, Darryl, Barcellona, Carolyn M., Metsky, Hayden C., Baniecki, Mary Lynn, Barnes, Kayla G., Chak, Bridget, Freije, Catherine A., Gladden-Young, Adrianne, Gnirke, Andreas, Luo, Cynthia, MacInnis, Bronwyn, Matranga, Christian B., Park, Daniel J., Qu, James, Schaffner, Stephen F., Tomkins-Tinch, Christopher, West, Kendra L., Winnicki, Sarah M., Wohl, Shirlee, Yozwiak, Nathan L., Quick, Joshua, Fauver, Joseph R., Khan, Kamran, Brent, Shannon E., Reiner, Robert C., Lichtenberger, Paola N., Ricciardi, Michael J., Bailey, Varian K., Watkins, David I., Cone, Marshall R., Kopp, Edgar W., Hogan, Kelly N., Cannons, Andrew C., Jean, Reynald, Monaghan, Andrew J., Garry, Robert F., Loman, Nicholas J., Faria, Nuno R., Porcelli, Mario C., Vasquez, Chalmers, Nagle, Elyse R., Cummings, Derek A. T., Stanek, Danielle, Rambaut, Andrew, Sanchez-Lockhart, Mariano, Sabeti, Pardis C., Gillis, Leah D., Michael, Scott F., Bedford, Trevor, Pybus, Oliver G., Isern, Sharon, Palacios, Gustavo, Andersen, Kristian G.

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Flavopiridol-induced apoptosis during S phase requires E2F-1 and inhibition of cyclin A-dependent kinase activity von JINGRUI JIANG, MATRANGA, Christian B, DONGPO CAI, LATHAM, Vaughan M, XINXIN ZHANG, LOWELL, April M, MARTELLI, Fabio, SHAPIRO, Geoffrey I

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Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone von Park, Daniel J., Dudas, Gytis, Wohl, Shirlee, Goba, Augustine, Whitmer, Shannon L.M., Andersen, Kristian G., Sealfon, Rachel S., Ladner, Jason T., Kugelman, Jeffrey R., Matranga, Christian B., Winnicki, Sarah M., Qu, James, Gire, Stephen K., Gladden-Young, Adrianne, Jalloh, Simbirie, Nosamiefan, Dolo, Yozwiak, Nathan L., Moses, Lina M., Jiang, Pan-Pan, Lin, Aaron E., Schaffner, Stephen F., Bird, Brian, Towner, Jonathan, Mamoh, Mambu, Gbakie, Michael, Kanneh, Lansana, Kargbo, David, Massally, James L.B., Kamara, Fatima K., Konuwa, Edwin, Sellu, Josephine, Jalloh, Abdul A., Mustapha, Ibrahim, Foday, Momoh, Yillah, Mohamed, Erickson, Bobbie R., Sealy, Tara, Blau, Dianna, Paddock, Christopher, Brault, Aaron, Amman, Brian, Basile, Jane, Bearden, Scott, Belser, Jessica, Bergeron, Eric, Campbell, Shelley, Chakrabarti, Ayan, Dodd, Kimberly, Flint, Mike, Gibbons, Aridth, Goodman, Christin, Klena, John, McMullan, Laura, Morgan, Laura, Russell, Brandy, Salzer, Johanna, Sanchez, Angela, Wang, David, Jungreis, Irwin, Tomkins-Tinch, Christopher, Kislyuk, Andrey, Lin, Michael F., Chapman, Sinead, MacInnis, Bronwyn, Matthews, Ashley, Bochicchio, James, Hensley, Lisa E., Kuhn, Jens H., Nusbaum, Chad, Schieffelin, John S., Birren, Bruce W., Forget, Marc, Nichol, Stuart T., Palacios, Gustavo F., Ndiaye, Daouda, Happi, Christian, Gevao, Sahr M., Vandi, Mohamed A., Kargbo, Brima, Holmes, Edward C., Bedford, Trevor, Gnirke, Andreas, Ströher, Ute, Rambaut, Andrew, Garry, Robert F., Sabeti, Pardis C.

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Clinical Sequencing Uncovers Origins and Evolution of Lassa Virus von Andersen, Kristian G., Shapiro, B. Jesse, Matranga, Christian B., Sealfon, Rachel, Lin, Aaron E., Moses, Lina M., Folarin, Onikepe A., Goba, Augustine, Odia, Ikponmwonsa, Ehiane, Philomena E., Momoh, Mambu, England, Eleina M., Winnicki, Sarah, Branco, Luis M., Gire, Stephen K., Phelan, Eric, Tariyal, Ridhi, Tewhey, Ryan, Omoniwa, Omowunmi, Fullah, Mohammed, Fonnie, Richard, Fonnie, Mbalu, Kanneh, Lansana, Jalloh, Simbirie, Gbakie, Michael, Saffa, Sidiki, Karbo, Kandeh, Gladden, Adrianne D., Qu, James, Stremlau, Matthew, Nekoui, Mahan, Finucane, Hilary K., Tabrizi, Shervin, Vitti, Joseph J., Birren, Bruce, Fitzgerald, Michael, McCowan, Caryn, Ireland, Andrea, Berlin, Aaron M., Bochicchio, James, Tazon-Vega, Barbara, Lennon, Niall J., Ryan, Elizabeth M., Bjornson, Zach, Milner, Danny A., Lukens, Amanda K., Broodie, Nisha, Rowland, Megan, Heinrich, Megan, Akdag, Marjan, Schieffelin, John S., Levy, Danielle, Akpan, Henry, Bausch, Daniel G., Rubins, Kathleen, McCormick, Joseph B., Lander, Eric S., Günther, Stephan, Hensley, Lisa, Okogbenin, Sylvanus, Schaffner, Stephen F., Okokhere, Peter O., Khan, S. Humarr, Grant, Donald S., Akpede, George O., Asogun, Danny A., Gnirke, Andreas, Levin, Joshua Z., Happi, Christian T., Garry, Robert F., Sabeti, Pardis C.

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Chikungunya Arthritis Mechanisms in the Americas: A cross-sectional analysis of chikungunya arthritis patients 22-months post-infection demonstrate no detectable viral persistence... von Chang, Aileen Y., Martins, Karen A.O., Encinales, Liliana, Reid, Patrick, Acuña, Marlon, Encinales, Carlos, Matranga, Christian B., Pacheco, Nelly, Cure, Carlos, Shukla, Bhavarth, Arteta, Teofilo Ruiz, Amdur, Richard, Cazares, Lisa H., Gregory, Melissa, Ward, Michael D., Porras, Alexandra, Mendoza, Alejandro Rico, Dong, Lian, Kenny, Tara, Brueggemann, Ernie, Downey, Lydia G., Kamalapathy, Priyanka, Lichtenberger, Paola, Falls, Orlando, Simon, Gary L., Bethony, Jeffrey, Firestein, Gary S.

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