Exploring bacterial diversity via a curated and searchable snapshot of archived DNA sequences von Blackwell, Grace A, Hunt, Martin, Malone, Kerri M, Lima, Leandro, Horesh, Gal, Alako, Blaise T F, Thomson, Nicholas R, Iqbal, Zamin

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Circlator: automated circularization of genome assemblies using long sequencing reads von Hunt, Martin, Silva, Nishadi De, Otto, Thomas D, Parkhill, Julian, Keane, Jacqueline A, Harris, Simon R

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Gramtools enables multiscale variation analysis with genome graphs von Letcher, Brice, Hunt, Martin, Iqbal, Zamin

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Roary: rapid large-scale prokaryote pan genome analysis von Page, Andrew J, Cummins, Carla A, Hunt, Martin, Wong, Vanessa K, Reuter, Sandra, Holden, Matthew T G, Fookes, Maria, Falush, Daniel, Keane, Jacqueline A, Parkhill, Julian

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Sim2Ls: FAIR simulation workflows and data von Hunt, Martin, Clark, Steven, Mejia, Daniel, Desai, Saaketh, Strachan, Alejandro

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ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads von Hunt, Martin, Mather, Alison E, Sánchez-Busó, Leonor, Page, Andrew J, Parkhill, Julian, Keane, Jacqueline A, Harris, Simon R

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IVA: accurate de novo assembly of RNA virus genomes von Hunt, Martin, Gall, Astrid, Ong, Swee Hoe, Brener, Jacqui, Ferns, Bridget, Goulder, Philip, Nastouli, Eleni, Keane, Jacqueline A, Kellam, Paul, Otto, Thomas D

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Pandora: nucleotide-resolution bacterial pan-genomics with reference graphs von Colquhoun, Rachel M, Hall, Michael B, Lima, Leandro, Roberts, Leah W, Malone, Kerri M, Hunt, Martin, Letcher, Brice, Hawkey, Jane, George, Sophie, Pankhurst, Louise, Iqbal, Zamin

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Minos: variant adjudication and joint genotyping of cohorts of bacterial genomes von Hunt, Martin, Letcher, Brice, Malone, Kerri M, Nguyen, Giang, Hall, Michael B, Colquhoun, Rachel M, Lima, Leandro, Schatz, Michael C, Ramakrishnan, Srividya, Iqbal, Zamin

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Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei von Hawkey, Jane, Paranagama, Kalani, Baker, Kate S., Bengtsson, Rebecca J., Weill, François-Xavier, Thomson, Nicholas R., Baker, Stephen, Cerdeira, Louise, Iqbal, Zamin, Hunt, Martin, Ingle, Danielle J., Dallman, Timothy J., Jenkins, Claire, Williamson, Deborah A., Holt, Kathryn E.

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Inferring synteny between genome assemblies: a systematic evaluation von Liu, Dang, Hunt, Martin, Tsai, Isheng J

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Genetic control of α‐farnesene production in apple fruit and its role in fungal pathogenesis von Souleyre, Edwige J. F., Bowen, Joanna K., Matich, Adam J., Tomes, Sumathi, Chen, Xiuyin, Hunt, Martin B., Wang, Mindy Y., Ileperuma, Nadeesha R., Richards, Kate, Rowan, Daryl D., Chagné, David, Atkinson, Ross G.

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Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus von Kikuchi, Taisei, Cotton, James A, Dalzell, Jonathan J, Hasegawa, Koichi, Kanzaki, Natsumi, McVeigh, Paul, Takanashi, Takuma, Tsai, Isheng J, Assefa, Samuel A, Cock, Peter J A, Otto, Thomas Dan, Hunt, Martin, Reid, Adam J, Sanchez-Flores, Alejandro, Tsuchihara, Kazuko, Yokoi, Toshiro, Larsson, Mattias C, Miwa, Johji, Maule, Aaron G, Sahashi, Norio, Jones, John T, Berriman, Matthew

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Intracranial aneurysm and coarctation of the aorta: prevalence in the current era von Andrade, Lauren, Hoskoppal, Arvind, Hunt Martin, Mary, Whitehead, Kevin, Ou, Zhining, Kuang, Jinqiu, Cox, Daniel

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HPMCD: the database of human microbial communities from metagenomic datasets and microbial reference genomes von Forster, Samuel C, Browne, Hilary P, Kumar, Nitin, Hunt, Martin, Denise, Hubert, Mitchell, Alex, Finn, Robert D, Lawley, Trevor D

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A Phylogenetic and Phenotypic Analysis of Salmonella enterica Serovar Weltevreden, an Emerging Agent of Diarrheal Disease in Tropical Regions von Makendi, Carine, Page, Andrew J, Wren, Brendan W, Le Thi Phuong, Tu, Clare, Simon, Hale, Christine, Goulding, David, Klemm, Elizabeth J, Pickard, Derek, Okoro, Chinyere, Hunt, Martin, Thompson, Corinne N, Phu Huong Lan, Nguyen, Tran Do Hoang, Nhu, Thwaites, Guy E, Le Hello, Simon, Brisabois, Anne, Weill, François-Xavier, Baker, Stephen, Dougan, Gordon

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Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis thaliana von Rowan, Daryl D, Cao, Mingshu, Lin-Wang, Kui, Cooney, Janine M, Jensen, Dwayne J, Austin, Paul T, Hunt, Martin B, Norling, Cara, Hellens, Roger P, Schaffer, Robert J, Allan, Andrew C

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AAT1 locus is critical for the biosynthesis of esters contributing to ‘ripe apple’ flavour in ‘Royal Gala’ and ‘Granny Smith’ apples von Souleyre, Edwige J. F, Chagné, David, Chen, Xiuyin, Tomes, Sumathi, Turner, Rebecca M, Wang, Mindy Y, Maddumage, Ratnasiri, Hunt, Martin B, Winz, Robert A, Wiedow, Claudia, Hamiaux, Cyril, Gardiner, Susan E, Rowan, Daryl D, Atkinson, Ross G

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SAPIEN valve for percutaneous transcatheter pulmonary valve replacement without “pre‐stenting”: A multi‐institutional experience von Morgan, Gareth J., Sadeghi, Soraya, Salem, Moris M., Wilson, Neil, Kay, Joseph, Rothman, Abraham, Galindo, Alvaro, Martin, Mary Hunt, Gray, Robert, Ross, Michael, Aboulhosn, Jamil A., Levi, Daniel Steven

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Real-Time Multirate Multiband Amplification for Hearing Aids von Sokolova, Alice, Sengupta, Dhiman, Hunt, Martin, Gupta, Rajesh, Aksanli, Baris, Harris, Fredric, Garudadri, Harinath

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