Better Epitope Discovery, Precision Immune Engineering, and Accelerated Vaccine Design Using Immunoinformatics Tools von De Groot, Anne S, Moise, Leonard, Terry, Frances, Gutierrez, Andres H, Hindocha, Pooja, Richard, Guilhem, Hoft, Daniel Fredric, Ross, Ted M, Noe, Amy R, Takahashi, Yoshimasa, Kotraiah, Vinayaka, Silk, Sarah E, Nielsen, Carolyn M, Minassian, Angela M, Ashfield, Rebecca, Ardito, Matt, Draper, Simon J, Martin, William D

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Neoadjuvant personalized cancer vaccines: the final frontier? von Richard, Guilhem, Ruggiero, Nicole, Steinberg, Gary D, Martin, William D, De Groot, Anne S

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Does human homology reduce the potential immunogenicity of non-antibody scaffolds? von De Groot, Anne S, Khan, Sundos, Mattei, Aimee E, Lelias, Sandra, Martin, William D

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In silico methods for immunogenicity risk assessment and human homology screening for therapeutic antibodies von Mattei, Aimee E, Gutierrez, Andres H, Seshadri, Soorya, Tivin, Jacob, Ardito, Matt, Rosenberg, Amy S, Martin, William D, De Groot, Anne S

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A humanized mouse model identifies key amino acids for low immunogenicity of H7N9 vaccines von Wada, Yamato, Nithichanon, Arnone, Nobusawa, Eri, Moise, Leonard, Martin, William D., Yamamoto, Norio, Terahara, Kazutaka, Hagiwara, Haruhisa, Odagiri, Takato, Tashiro, Masato, Lertmemongkolchai, Ganjana, Takeyama, Haruko, De Groot, Anne S., Ato, Manabu, Takahashi, Yoshimasa

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Multi-step screening of neoantigens’ HLA- and TCR-interfaces improves prediction of survival von Richard, Guilhem, De Groot, Anne S., Steinberg, Gary D., Garcia, Tzintzuni I., Kacew, Alec, Ardito, Matthew, Martin, William D., Berdugo, Gad, Princiotta, Michael F., Balar, Arjun V., Sweis, Randy F.

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Assessing the immunogenicity risk of salmon calcitonin peptide impurities using in silico and in vitro methods von Roberts, Brian J, Mattei, Aimee E, Howard, Kristina E, Weaver, James L, Liu, Hao, Lelias, Sandra, Martin, William D, Verthelyi, Daniela, Pang, Eric, Edwards, Katie J, De Groot, Anne S

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Identification of immunodominant T cell epitopes induced by natural Zika virus infection von Eickhoff, Christopher S., Meza, Krystal A., Terry, Frances E., Colbert, Chase G., Blazevic, Azra, Gutiérrez, Andres H., Stone, E. Taylor, Brien, James D., Pinto, Amelia K., El Sahly, Hana M., Mulligan, Mark J., Rouphael, Nadine, Alcaide, Maria L., Tomashek, Kay M., Focht, Chris, Martin, William D., Moise, Leonard, De Groot, Anne S., Hoft, Daniel F.

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In Vivo Validation of Predicted and Conserved T Cell Epitopes in a Swine Influenza Model von Gutiérrez, Andres H, Loving, Crystal, Moise, Leonard, Terry, Frances E, Brockmeier, Susan L, Hughes, Holly R, Martin, William D, De Groot, Anne S

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New Immunoinformatics Tools for Swine: Designing Epitope-Driven Vaccines, Predicting Vaccine Efficacy, and Making Vaccines on Demand von Moise, Lenny, Gutiérrez, Andres H, Khan, Sundos, Tan, Swan, Ardito, Matt, Martin, William D, De Groot, Anne S

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Promiscuous Coxiella burnetii CD4 Epitope Clusters Associated With Human Recall Responses Are Candidates for a Novel T-Cell Targeted Multi-Epitope Q Fever Vaccine von Scholzen, Anja, Richard, Guilhem, Moise, Leonard, Baeten, Laurie A, Reeves, Patrick M, Martin, William D, Brauns, Timothy A, Boyle, Christine M, Raju Paul, Susan, Bucala, Richard, Bowen, Richard A, Garritsen, Anja, De Groot, Anne S, Sluder, Ann E, Poznansky, Mark C

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Immune Tolerance-Adjusted Personalized Immunogenicity Prediction for Pompe Disease von De Groot, Anne S., Desai, Ankit K., Lelias, Sandra, Miah, S. M. Shahjahan, Terry, Frances E., Khan, Sundos, Li, Cindy, Yi, John S., Ardito, Matt, Martin, William D., Kishnani, Priya S.

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Modeling of the Hydrologic Performance of Distributed LID Stormwater under a Changing Climate: Municipal-Scale Performance Improvements von Martin, William D., Kaye, Nigel B.

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In silico identification and modification of T cell epitopes in pertussis antigens associated with tolerance von Kruiswijk, Corine, Richard, Guilhem, Salverda, Merijn L.M., Hindocha, Pooja, Martin, William D., De Groot, Anne S., Van Riet, Elly

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Identification and Immune Assessment of T Cell Epitopes in Five Plasmodium falciparum Blood Stage Antigens to Facilitate Vaccine Candidate Selection and Optimization von Kotraiah, Vinayaka, Phares, Timothy W., Terry, Frances E., Hindocha, Pooja, Silk, Sarah E., Nielsen, Carolyn M., Moise, Leonard, Tucker, Kenneth D., Ashfield, Rebecca, Martin, William D., De Groot, Anne S., Draper, Simon J., Gutierrez, Gabriel M., Noe, Amy R.

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Bridging Computational Vaccinology and Vaccine Development Through Systematic Identification, Characterization, and Downselection of Conserved and Variable Circumsporozoite Protein... von Noe, Amy R., Terry, Frances E., Schanen, Brian C., Sassano, Emily, Hindocha, Pooja, Phares, Timothy W., Moise, Leonard, Christen, Jayne M., Tucker, Kenneth D., Kotraiah, Vinayaka, Drake, Donald R., Martin, William D., De Groot, Anne S., Gutierrez, Gabriel M.

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Immune escape and immune camouflage may reduce the efficacy of RTS,S vaccine in Malawi von Khan, Sundos, Parrillo, Matthew, Gutierrez, Andres H., Terry, Frances E., Moise, Leonard, Martin, William D., De Groot, Anne S.

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Development and validation of an epitope prediction tool for swine (PigMatrix) based on the pocket profile method von Gutiérrez, Andres H, Martin, William D, Bailey-Kellogg, Chris, Terry, Frances, Moise, Leonard, De Groot, Anne S

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Identification, Selection and Immune Assessment of Liver Stage CD8 T Cell Epitopes From Plasmodium falciparum von Tucker, Kenneth D., Schanen, Brian C., Phares, Timothy W., Sassano, Emily, Terry, Frances E., Hindocha, Pooja, Moise, Leonard, Kotraiah, Vinayaka, Martin, William D., De Groot, Anne S., Drake, Donald R., Gutierrez, Gabriel M., Noe, Amy R.

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Human immune responses to H. pylori HLA Class II epitopes identified by immunoinformatic methods von Zhang, Songhua, Desrosiers, Joseph, Aponte-Pieras, Jose R, DaSilva, Kristen, Fast, Loren D, Terry, Frances, Martin, William D, De Groot, Anne S, Moise, Leonard, Moss, Steven F

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