A unifying model that explains the origins of human inverted copy number variants von Brewer, Bonita J, Dunham, Maitreya J, Raghuraman, M K

Volltext

The effects of manipulating levels of replication initiation factors on origin firing efficiency in yeast von Lynch, Kelsey L, Alvino, Gina M, Kwan, Elizabeth X, Brewer, Bonita J, Raghuraman, M K

Volltext

Template switching between the leading and lagging strands at replication forks generates inverted copy number variants through hairpin-capped extrachromosomal DNA von Martin, Rebecca, Espinoza, Claudia Y, Large, Christopher R L, Rosswork, Joshua, Van Bruinisse, Cole, Miller, Aaron W, Sanchez, Joseph C, Miller, Madison, Paskvan, Samantha, Alvino, Gina M, Dunham, Maitreya J, Raghuraman, M K, Brewer, Bonita J

Volltext

Defective replication initiation results in locus specific chromosome breakage and a ribosomal RNA deficiency in yeast von Sanchez, Joseph C, Kwan, Elizabeth X, Pohl, Thomas J, Amemiya, Haley M, Raghuraman, M K, Brewer, Bonita J

Volltext

A natural polymorphism in rDNA replication origins links origin activation with calorie restriction and lifespan von Kwan, Elizabeth X, Foss, Eric J, Tsuchiyama, Scott, Alvino, Gina M, Kruglyak, Leonid, Kaeberlein, Matt, Raghuraman, M K, Brewer, Bonita J, Kennedy, Brian K, Bedalov, Antonio

Volltext

Origin-Dependent Inverted-Repeat Amplification: Tests of a Model for Inverted DNA Amplification von Brewer, Bonita J, Payen, Celia, Di Rienzi, Sara C, Higgins, Megan M, Ong, Giang, Dunham, Maitreya J, Raghuraman, M K

Volltext

Functional centromeres determine the activation time of pericentric origins of DNA replication in Saccharomyces cerevisiae von Pohl, Thomas J, Brewer, Bonita J, Raghuraman, M K

Volltext

Replication Dynamics of the Yeast Genome von Raghuraman, M. K., Winzeler, Elizabeth A., Collingwood, David, Hunt, Sonia, Wodicka, Lisa, Conway, Andrew, Lockhart, David J., Davis, Ronald W., Brewer, Bonita J., Fangman, Walton L.

Volltext

GC-rich DNA elements enable replication origin activity in the methylotrophic yeast Pichia pastoris von Liachko, Ivan, Youngblood, Rachel A, Tsui, Kyle, Bubb, Kerry L, Queitsch, Christine, Raghuraman, M K, Nislow, Corey, Brewer, Bonita J, Dunham, Maitreya J

Volltext

Replication in Hydroxyurea: It's a Matter of Time von Alvino, Gina M., Collingwood, David, Murphy, John M., Delrow, Jeffrey, Brewer, Bonita J., Raghuraman, M. K.

Volltext

rDNA Copy Number Variants Are Frequent Passenger Mutations in Saccharomyces cerevisiae Deletion Collections and de Novo Transformants von Kwan, Elizabeth X, Wang, Xiaobin S, Amemiya, Haley M, Brewer, Bonita J, Raghuraman, M K

Volltext

Origin-dependent inverted-repeat amplification: a replication-based model for generating palindromic amplicons von Brewer, Bonita J, Payen, Celia, Raghuraman, M K, Dunham, Maitreya J

Volltext

Phenotypic and Genotypic Consequences of CRISPR/Cas9 Editing of the Replication Origins in the rDNA of Saccharomyces cerevisiae von Sanchez, Joseph C, Ollodart, Anja, Large, Christopher R L, Clough, Courtnee, Alvino, Gina M, Tsuchiya, Mitsuhiro, Crane, Matthew, Kwan, Elizabeth X, Kaeberlein, Matt, Dunham, Maitreya J, Raghuraman, M K, Brewer, Bonita J

Volltext

Centromere Replication Timing Determines Different Forms of Genomic Instability in Saccharomyces cerevisiae Checkpoint Mutants During Replication Stress von Feng, Wenyi, Bachant, Jeff, Collingwood, David, Raghuraman, M.K, Brewer, Bonita J

Volltext

The effect of Ku on telomere replication time is mediated by telomere length but is independent of histone tail acetylation von Lian, Hui-Yong, Robertson, E Douglas, Hiraga, Shin-ichiro, Alvino, Gina M, Collingwood, David, McCune, Heather J, Sridhar, Akila, Brewer, Bonita J, Raghuraman, M K, Donaldson, Anne D

Volltext

Rif1 controls DNA replication by directing Protein Phosphatase 1 to reverse Cdc7-mediated phosphorylation of the MCM complex von Hiraga, Shin-Ichiro, Alvino, Gina M, Chang, Fujung, Lian, Hui-Yong, Sridhar, Akila, Kubota, Takashi, Brewer, Bonita J, Weinreich, Michael, Raghuraman, M K, Donaldson, Anne D

Volltext

Molecular analysis of the replication program in unicellular model organisms von Raghuraman, M. K, Brewer, Bonita J

Volltext

The Positioning and Dynamics of Origins of Replication in the Budding Yeast Nucleus von Heun, Patrick, Laroche, Thierry, Raghuraman, M. K., Gasser, Susan M.

Volltext

Structural Changes in Mcm5 Protein Bypass Cdc7-Dbf4 Function and Reduce Replication Origin Efficiency in Saccharomyces cerevisiae von Hoang, Margaret L., Leon, Ronald P., Pessoa-Brandao, Luis, Hunt, Sonia, Raghuraman, M. K., Fangman, Walton L., Brewer, Bonita J., Sclafani, Robert A.

Volltext

Hotspot of de novo telomere addition stabilizes linear amplicons in yeast grown in sulfate-limiting conditions von Hoerr, Remington E, Eng, Alex, Payen, Celia, Di Rienzi, Sara C, Raghuraman, M K, Dunham, Maitreya J, Brewer, Bonita J, Friedman, Katherine L

Volltext