Evaluating bias of illumina-based bacterial 16S rRNA gene profiles von Kennedy, Katherine, Hall, Michael W, Lynch, Michael D J, Moreno-Hagelsieb, Gabriel, Neufeld, Josh D

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Generation of Multimillion-Sequence 16S rRNA Gene Libraries from Complex Microbial Communities by Assembling Paired-End Illumina Reads von Bartram, Andrea K, Lynch, Michael D J, Stearns, Jennifer C, Moreno-Hagelsieb, Gabriel, Neufeld, Josh D

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Ecology and exploration of the rare biosphere von Lynch, Michael D. J., Neufeld, Josh D.

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Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production von Doxey, Andrew C, Kurtz, Daniel A, Lynch, Michael DJ, Sauder, Laura A, Neufeld, Josh D

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Transmitting silks of maize have a complex and dynamic microbiome von Khalaf, Eman M., Shrestha, Anuja, Rinne, Jeffrey, Lynch, Michael D. J., Shearer, Charles R., Limay-Rios, Victor, Reid, Lana M., Raizada, Manish N.

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A Novel Tiled Amplicon Sequencing Assay Targeting the Tomato Brown Rugose Fruit Virus (ToBRFV) Genome Reveals Widespread Distribution in Municipal Wastewater Treatment Systems in t... von Nash, Delaney, Ellmen, Isaac, Knapp, Jennifer J, Menon, Ria, Overton, Alyssa K, Cheng, Jiujun, Lynch, Michael D J, Nissimov, Jozef I, Charles, Trevor C

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Prevalence of Anaerobic Ammonium-Oxidizing Bacteria in Contaminated Groundwater von Moore, Tara A, Xing, Yangping, Lazenby, Brent, Lynch, Michael D. J, Schiff, Sherry, Robertson, William D, Timlin, Robert, Lanza, Sadia, Ryan, M. Cathryn, Aravena, Ramon, Fortin, Danielle, Clark, Ian D, Neufeld, Josh D

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Diversity of Basidiomycetes in Michigan Agricultural Soils von Lynch, Michael D.J, Thorn, R. Greg

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Bacterial biogeography of the human digestive tract von Stearns, Jennifer C., Lynch, Michael D. J., Senadheera, Dilani B., Tenenbaum, Howard C., Goldberg, Michael B., Cvitkovitch, Dennis G., Croitoru, Kenneth, Moreno-Hagelsieb, Gabriel, Neufeld, Josh D.

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Time Series Resolution of the Fish Necrobiome Reveals a Decomposer Succession Involving Toxigenic Bacterial Pathogens von Lobb, Briallen, Hodgson, Rhiannon, Lynch, Michael D J, Mansfield, Michael J, Cheng, Jiujun, Charles, Trevor C, Neufeld, Josh D, Craig, Paul M, Doxey, Andrew C

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Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm von Bartram, Andrea K., Jiang, Xingpeng, Lynch, Michael D.J., Masella, Andre P., Nicol, Graeme W., Dushoff, Jonathan, Neufeld, Josh D.

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A NEW LOOK AT AN ANCIENT ORDER: GENERIC REVISION OF THE BANGIALES (RHODOPHYTA) von Sutherland, Judith E., Lindstrom, Sandra C., Nelson, Wendy A., Brodie, Juliet, Lynch, Michael D. J., Hwang, Mi Sook, Choi, Han-Gu, Miyata, Masahiko, Kikuchi, Norio, Oliveira, Mariana C., Farr, Tracy, Neefus, Chris, Mols-Mortensen, Agnes, Milstein, Daniela, Müller, Kirsten M.

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High Throughput Sequencing of MicroRNA in Rainbow Trout Plasma, Mucus, and Surrounding Water Following Acute Stress von Ikert, Heather, Lynch, Michael D J, Doxey, Andrew C, Giesy, John P, Servos, Mark R, Katzenback, Barbara A, Craig, Paul M

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SSUnique: Detecting Sequence Novelty in Microbiome Surveys von Lynch, Michael D J, Neufeld, Josh D

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Limosilactobacillus reuteri administration alters the gut-brain-behavior axis in a sex-dependent manner in socially monogamous prairie voles von Donovan, Meghan, Mackey, Calvin S, Lynch, Michael D J, Platt, Grayson N, Brown, Amber N, Washburn, Brian K, Trickey, Darryl J, Curtis, J Thomas, Liu, Yan, Charles, Trevor C, Wang, Zuoxin, Jones, Kathryn M

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Genome Sequence of Brevundimonas sp., an Arsenic Resistant Soil Bacterium von Soto, Javiera, Charles, Trevor C., Lynch, Michael D. J., Larama, Giovanni, Herrera, Hector, Arriagada, César

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Effects of laboratory domestication on the rodent gut microbiome von Bowerman, Kate L, Knowles, Sarah C L, Bradley, Janette E, Baltrūnaitė, Laima, Lynch, Michael D J, Jones, Kathryn M, Hugenholtz, Philip

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Norwegian deep-water coral reefs: cultivation and molecular analysis of planktonic microbial communities von Jensen, Sigmund, Lynch, Michael D. J., Ray, Jessica L., Neufeld, Josh D., Hovland, Martin

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Insights into the evolutionary origins of clostridial neurotoxins from analysis of the Clostridium botulinum strain A neurotoxin gene cluster von Doxey, Andrew C, Lynch, Michael D J, Müller, Kirsten M, Meiering, Elizabeth M, McConkey, Brendan J

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Driving factors influencing the rhizobacteriome community structure of plants adapted to multiple climatic stressors in edaphic savannas von Thomas-Barry, Gem, St. Martin, Chaney C.G., Lynch, Michael D.J., Ramsubhag, Adesh, Rouse-Miller, Judy, Charles, Trevor C.

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