Discovering molecular features of intrinsically disordered regions by using evolution for contrastive learning von Lu, Alex X, Lu, Amy X, Pritišanac, Iva, Zarin, Taraneh, Forman-Kay, Julie D, Moses, Alan M

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Learned Embeddings from Deep Learning to Visualize and Predict Protein Sets von Dallago, Christian, Schütze, Konstantin, Heinzinger, Michael, Olenyi, Tobias, Littmann, Maria, Lu, Amy X., Yang, Kevin K., Min, Seonwoo, Yoon, Sungroh, Morton, James T., Rost, Burkhard

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History and publication trends in the diffusion and early uptake of indirect comparison meta-analytic methods to study drugs: animated coauthorship networks over time von Ban, Joann K, Tadrous, Mina, Lu, Amy X, Cicinelli, Erin A, Cadarette, Suzanne M

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Evolution Is All You Need: Phylogenetic Augmentation for Contrastive Learning von Lu, Amy X, Lu, Alex X, Moses, Alan

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The Cells Out of Sample (COOS) dataset and benchmarks for measuring out-of-sample generalization of image classifiers von Lu, Alex X, Lu, Amy X, Schormann, Wiebke, Ghassemi, Marzyeh, Andrews, David W, Moses, Alan M

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Hurtful Words: Quantifying Biases in Clinical Contextual Word Embeddings von Zhang, Haoran, Lu, Amy X, Abdalla, Mohamed, McDermott, Matthew, Ghassemi, Marzyeh

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Evolution Is All You Need: Phylogenetic Augmentation for Contrastive Learning von Lu, Amy X, Lu, Alex X, Moses, Alan

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Data and Weights for Reverse Homology von Lu, Alex X, Lu, Amy X, Pritišanac, Iva, Taraneh Zarin, Forman-Kay, Julie D, Moses, Alan M

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The Cells Out of Sample (COOS) dataset and benchmarks for measuring out-of-sample generalization of image classifiers von Lu, Alex X, Lu, Amy X, Schormann, Wiebke, Ghassemi, Marzyeh, Andrews, David W, Moses, Alan M

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COOS-7 (Cells Out Of Sample 7-Class) von Lu, Alex X, Lu, Amy X, Schormann, Wiebke, Ghassemi, Marzyeh, Andrews, David W, Moses, Alan M

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Hurtful Words: Quantifying Biases in Clinical Contextual Word Embeddings von Zhang, Haoran, Lu, Amy X, Abdalla, Mohamed, McDermott, Matthew, Ghassemi, Marzyeh

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Clonal Deletion of Tumor-Specific T Cells by Interferon-γ Confers Therapeutic Resistance to Combination Immune Checkpoint Blockade von Pai, Chien-Chun Steven, Huang, John T., Lu, Xiaoqing, Simons, Donald M., Park, Chanhyuk, Chang, Anthony, Tamaki, Whitney, Liu, Eric, Roybal, Kole T., Seagal, Jane, Chen, Mingyi, Hagihara, Katsunobu, Wei, Xiao X., DuPage, Michel, Kwek, Serena S., Oh, David Y., Daud, Adil, Tsai, Katy K., Wu, Clint, Zhang, Li, Fasso, Marcella, Sachidanandam, Ravi, Jayaprakash, Anitha, Lin, Ingrid, Casbon, Amy-Jo, Kinsbury, Gillian A., Fong, Lawrence

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Stroke risk in women with atrial fibrillation von Buhari, Hifza, Fang, Jiming, Han, Lu, Austin, Peter C, Dorian, Paul, Jackevicius, Cynthia A, Yu, Amy Y X, Kapral, Moira K, Singh, Sheldon M, Tu, Karen, Ko, Dennis T, Atzema, Clare L, Benjamin, Emelia J, Lee, Douglas S, Abdel-Qadir, Husam

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Artificial intelligence-driven morphology-based enrichment of malignant cells from body fluid von Mavropoulos, Anastasia, Johnson, Chassidy, Lu, Vivian, Nieto, Jordan, Schneider, Emilie C., Saini, Kiran, Phelan, Michael L., Hsie, Linda X., Wang, Maggie J., Cruz, Janifer, Mei, Jeanette, Kim, Julie J., Lian, Zhouyang, Li, Nianzhen, Boutet, Stephane C., Wong-Thai, Amy Y., Yu, Weibo, Lu, Qing-Yi, Kim, Teresa, Geng, Yipeng, Masaeli, Maddison (Mahdokht), Lee, Thomas D., Rao, Jianyu

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Neurotransmitter classification from electron microscopy images at synaptic sites in Drosophila melanogaster von Eckstein, Nils, Bates, Alexander Shakeel, Champion, Andrew, Du, Michelle, Yin, Yijie, Schlegel, Philipp, Lu, Alicia Kun-Yang, Rymer, Thomson, Finley-May, Samantha, Paterson, Tyler, Parekh, Ruchi, Dorkenwald, Sven, Matsliah, Arie, Yu, Szi-Chieh, McKellar, Claire, Sterling, Amy, Eichler, Katharina, Costa, Marta, Seung, Sebastian, Murthy, Mala, Hartenstein, Volker, Jefferis, Gregory S.X.E., Funke, Jan

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Site-specific conjugation of a cytotoxic drug to an antibody improves the therapeutic index von Junutula, Jagath R, Mallet, William, Raab, Helga, Clark, Suzanna, Bhakta, Sunil, Leipold, Douglas D, Weir, Sylvia, Chen, Yvonne, Simpson, Michelle, Tsai, Siao Ping, Dennis, Mark S, Lu, Yanmei, Meng, Y Gloria, Ng, Carl, Yang, Jihong, Lee, Chien C, Duenas, Eileen, Gorrell, Jeffrey, Katta, Viswanatham, Kim, Amy, McDorman, Kevin, Flagella, Kelly, Venook, Rayna, Ross, Sarajane, Spencer, Susan D, Lee Wong, Wai, Lowman, Henry B, Vandlen, Richard, Sliwkowski, Mark X, Scheller, Richard H, Polakis, Paul

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Risk factors for medication non-adherence among atrial fibrillation patients von Reading, Stephanie R, Black, Mary Helen, Singer, Daniel E, Go, Alan S, Fang, Margaret C, Udaltsova, Natalia, Harrison, Teresa N, Wei, Rong X, Liu, In-Lu Amy, Reynolds, Kristi

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Population mobility reductions associated with travel restrictions during the Ebola epidemic in Sierra Leone: use of mobile phone data von Peak, Corey M, Wesolowski, Amy, Zu Erbach-Schoenberg, Elisabeth, Tatem, Andrew J, Wetter, Erik, Lu, Xin, Power, Daniel, Weidman-Grunewald, Elaine, Ramos, Sergio, Moritz, Simon, Buckee, Caroline O, Bengtsson, Linus

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Verteporfin Inhibits PD-L1 through Autophagy and the STAT1-IRF1-TRIM28 Signaling Axis, Exerting Antitumor Efficacy von Liang, Jiyong, Wang, Lulu, Wang, Chao, Shen, Jianfeng, Su, Bojin, Marisetty, Anantha L., Fang, Dexing, Kassab, Cynthia, Jeong, Kang Jin, Zhao, Wei, Lu, Yiling, Jain, Abhinav K., Zhou, Zhicheng, Liang, Han, Sun, Shao-Cong, Lu, Changming, Xu, Zhi-Xiang, Yu, Qinghua, Shao, Shan, Chen, XiaoHua, Gao, Meng, Claret, Francois X., Ding, Zhiyong, Chen, Jian, Chen, Pingsheng, Barton, Michelle C., Peng, Guang, Mills, Gordon B., Heimberger, Amy B.

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Validation of an anti-sphingosine-1-phosphate antibody as a potential therapeutic in reducing growth, invasion, and angiogenesis in multiple tumor lineages von Visentin, Barbara, Vekich, John A., Sibbald, Bradley J., Cavalli, Amy L., Moreno, Kelli M., Matteo, Rosalia G., Garland, William A., Lu, Yiling, Yu, Shuangxing, Hall, Hassan S., Kundra, Vikas, Mills, Gordon B., Sabbadini, Roger A.

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