Interactive exploration of RNA22 microRNA target predictions von LOHER, Phillipe, RIGOUTSOS, Isidore

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Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers von Honda, Shozo, Phillipe Loher, Megumi Shigematsu, Juan P. Palazzo, Ryusuke Suzuki, Issei Imoto, Isidore Rigoutsos, Yohei Kirino

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Knowledge about the presence or absence of miRNA isoforms (isomiRs) can successfully discriminate amongst 32 TCGA cancer types von Telonis, Aristeidis G, Magee, Rogan, Loher, Phillipe, Chervoneva, Inna, Londin, Eric, Rigoutsos, Isidore

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The microRNAs within the DLK1-DIO3 genomic region: involvement in disease pathogenesis von Benetatos, Leonidas, Hatzimichael, Eleftheria, Londin, Eric, Vartholomatos, George, Loher, Phillipe, Rigoutsos, Isidore, Briasoulis, Evangelos

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YAMAT-seq: an efficient method for high-throughput sequencing of mature transfer RNAs von Shigematsu, Megumi, Honda, Shozo, Loher, Phillipe, Telonis, Aristeidis G, Rigoutsos, Isidore, Kirino, Yohei

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IsomiR expression profiles in human lymphoblastoid cell lines exhibit population and gender dependencies von Loher, Phillipe, Londin, Eric R, Rigoutsos, Isidore

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Machine Learning Approaches Identify Genes Containing Spatial Information From Single-Cell Transcriptomics Data von Loher, Phillipe, Karathanasis, Nestoras

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Ribosomal RNA fragmentation into short RNAs (rRFs) is modulated in a sex- and population of origin-specific manner von Cherlin, Tess, Magee, Rogan, Jing, Yi, Pliatsika, Venetia, Loher, Phillipe, Rigoutsos, Isidore

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The biogenesis pathway of tRNA-derived piRNAs in Bombyx germ cells von Honda, Shozo, Kawamura, Takuya, Loher, Phillipe, Morichika, Keisuke, Rigoutsos, Isidore, Kirino, Yohei

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A comprehensive map of alternative polyadenylation in African American and European American lung cancer patients von Zingone, Adriana, Sinha, Sanju, Ante, Michael, Nguyen, Cu, Daujotyte, Dalia, Bowman, Elise D., Sinha, Neelam, Mitchell, Khadijah A., Chen, Qingrong, Yan, Chunhua, Loher, Phillipe, Meerzaman, Daoud, Ruppin, Eytan, Ryan, Bríd M.

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Unraveling the role of microRNA/isomiR network in multiple primary melanoma pathogenesis von Dika, Emi, Broseghini, Elisabetta, Porcellini, Elisa, Lambertini, Martina, Riefolo, Mattia, Durante, Giorgio, Loher, Phillipe, Roncarati, Roberta, Bassi, Cristian, Misciali, Cosimo, Negrini, Massimo, Rigoutsos, Isidore, Londin, Eric, Patrizi, Annalisa, Ferracin, Manuela

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The complex transcriptional landscape of the anucleate human platelet von Bray, Paul F, McKenzie, Steven E, Edelstein, Leonard C, Nagalla, Srikanth, Delgrosso, Kathleen, Ertel, Adam, Kupper, Joan, Jing, Yi, Londin, Eric, Loher, Phillipe, Chen, Huang-Wen, Fortina, Paolo, Rigoutsos, Isidore

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The subcellular distribution of miRNA isoforms, tRNA-derived fragments, and rRNA-derived fragments depends on nucleotide sequence and cell type von Cherlin, Tess, Jing, Yi, Shah, Siddhartha, Kennedy, Anne, Telonis, Aristeidis G, Pliatsika, Venetia, Wilson, Haley, Thompson, Lily, Vlantis, Panagiotis I, Loher, Phillipe, Leiby, Benjamin, Rigoutsos, Isidore

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Interferon α-induced SAMHD1 regulates human cultured megakaryocyte apoptosis and proplatelet formation von Bhatlekar, Seema, Jacob, Shancy, Tugolukova, Emilia, Manne, Bhanu K, Kosaka, Yasuhiro, Loher, Phillipe, O'Connell, Ryan M, Planelles, Vicente, Rondina, Matthew T, Rigoutsos, Isidore, Bray, Paul F

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Reply to Backes and Keller: Identification of novel tissue-specific and primate-specific human microRNAs von Londin, Eric, Loher, Phillipe, Rigoutsos, Isidore

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Molecular dynamics simulations of Ago silencing complexes reveal a large repertoire of admissible ‘seed-less’ targets von Xia, Zhen, Clark, Peter, Huynh, Tien, Loher, Phillipe, Zhao, Yue, Chen, Huang-Wen, Rigoutsos, Isidore, Zhou, Ruhong

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Increasing cell density globally enhances the biogenesis of Piwi-interacting RNAs in Bombyx mori germ cells von Honda, Shozo, Loher, Phillipe, Morichika, Keisuke, Shigematsu, Megumi, Kawamura, Takuya, Kirino, Yoriko, Rigoutsos, Isidore, Kirino, Yohei

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The Typical tRNA Co-Expresses Multiple 5′ tRNA Halves Whose Sequences and Abundances Depend on Isodecoder and Isoacceptor and Change with Tissue Type, Cell Type, and Disease von Akins, Robert Brian, Ostberg, Kayleigh, Cherlin, Tess, Tsiouplis, Nikolas J., Loher, Phillipe, Rigoutsos, Isidore

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Using medicare claims to estimate risk-adjusted performance of Pennsylvania trauma centers von Zebrowski, Alexis M, Loher, Phillipe, Buckler, David G, Rigoutsos, Isidore, Carr, Brendan G, Wiebe, Douglas J

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MINTmap: fast and exhaustive profiling of nuclear and mitochondrial tRNA fragments from short RNA-seq data von Loher, Phillipe, Telonis, Aristeidis G., Rigoutsos, Isidore

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