Engineering At-Home Dilution and Filtration Methods to Enable Paper-Based Colorimetric Biosensing in Human Blood with Cell-Free Protein Synthesis von Free, Tyler J, Tucker, Ryan W, Simonson, Katelyn M, Smith, Sydney A, Lindgren, Caleb M, Pitt, William G, Bundy, Bradley C

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Simplified and Unified Access to Cancer Proteogenomic Data von Lindgren, Caleb M, Adams, David W, Kimball, Benjamin, Boekweg, Hannah, Tayler, Sadie, Pugh, Samuel L, Payne, Samuel H

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Data‐Dependent Acquisition with Precursor Coisolation Improves Proteome Coverage and Measurement Throughput for Label‐Free Single‐Cell Proteomics von Truong, Thy, Webber, Kei G. I., Madisyn Johnston, S., Boekweg, Hannah, Lindgren, Caleb M., Liang, Yiran, Nydegger, Alissia, Xie, Xiaofeng, Tsang, Tsz‐Ming, Jayatunge, D. A. Dasun N., Andersen, Joshua L., Payne, Samuel H., Kelly, Ryan T.

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“Just add small molecules” cell‐free protein synthesis: Combining DNA template and cell extract preparation into a single fermentation von Smith, Sydney A., Lindgren, Caleb M., Ebbert, Landon E., Free, Tyler J., Nelson, J. Andrew D., Simonson, Katelyn M., Hunt, J. Porter, Bundy, Bradley C.

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Data‐Dependent Acquisition with Precursor Coisolation Improves Proteome Coverage and Measurement Throughput for Label‐Free Single‐Cell Proteomics von Truong, Thy, Webber, Kei G. I., Madisyn Johnston, S., Boekweg, Hannah, Lindgren, Caleb M., Liang, Yiran, Nydegger, Alissia, Xie, Xiaofeng, Tsang, Tsz‐Ming, Jayatunge, D. A. Dasun N., Andersen, Joshua L., Payne, Samuel H., Kelly, Ryan T.

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Abstract 251: Data distribution for easy pancancer analysis von Lindgren, Caleb M., Minor, Chelsie, Olsen, Lindsey K., Henderson, Brittany, Investigators, CPTAC, Payne, Samuel H.

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Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation von Geffen, Yifat, Anand, Shankara, Akiyama, Yo, Yaron, Tomer M., Song, Yizhe, Johnson, Jared L., Govindan, Akshay, Li, Yize, Huntsman, Emily, Wang, Liang-Bo, Birger, Chet, Heiman, David I., Zhang, Qing, Miller, Mendy, Calinawan, Anna, Belkin, Saveliy, Kerelsky, Alexander, Clauser, Karl R., Krug, Karsten, Satpathy, Shankha, Payne, Samuel H., Mani, D.R., Gillette, Michael A., Dhanasekaran, Saravana M., Thiagarajan, Mathangi, Mesri, Mehdi, Rodriguez, Henry, Robles, Ana I., Lazar, Alexander J., Ding, Li, Getz, Gad, An, Eunkyung, Anurag, Meenakshi, Bavarva, Jasmin, Birrer, Michael J., Cao, Song, Ceccarelli, Michele, Chinnaiyan, Arul M., Chowdhury, Shrabanti, Colaprico, Antonio, Carr, Steven A., da Veiga Leprevost, Felipe, Day, Corbin, Domagalski, Marcin J., Ellis, Matthew J., Fenyo, David, Foltz, Steven M., Francis, Alicia, Gonzalez Robles, Tania J., Gosline, Sara J.C., Gümüş, Zeynep H., Hiltke, Tara, Hong, Runyu, Hu, Yingwei, Huang, Chen, Iavarone, Antonio, Jewel, Scott D., Katsnelson, Lizabeth, Ketchum, Karen A., Kolodziejczak, Iga, Kumar-Sinha, Chandan, Krug, Karsten, Lei, Jonathan T., Liang, Wen-Wei, Liao, Yuxing, Lindgren, Caleb M., Liu, Tao, Liu, Wenke, Ma, Weiping, McKerrow, Wilson, Mesri, Mehdi, Newton, Chelsea, Omenn, Gilbert S., Paulovich, Amanda G., Petralia, Francesca, Pugliese, Pietro, Reva, Boris, Rodland, Karin D., Ruggles, Kelly V., Rodrigues, Fernanda Martins, Savage, Sara R., Schadt, Eric E., Schnaubelt, Michael, Schraink, Tobias, Shi, Zhiao, Smith, Richard D., Stathias, Vasileios, Storrs, Erik P., Selvan, Myvizhi Esai, Tan, Jimin, Thangudu, Ratna R., Wang, Joshua M., Wang, Pei, Wang, Ying (Cindy), Wen, Bo, Wu, Yige, Yi, Xinpei, Zhang, Bing, Zhang, Xu, Zhang, Zhen

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Proteogenomic data and resources for pan-cancer analysis von Dou, Yongchao, Da Veiga Leprevost, Felipe, Geffen, Yifat, Calinawan, Anna P., Aguet, François, Birger, Chet, Cao, Song, Chaudhary, Rekha, Cieslik, Marcin, Colaprico, Antonio, Zhou, Daniel Cui, Day, Corbin, Domagalski, Marcin J., Fenyö, David, Foltz, Steven M., Gonzalez-Robles, Tania, Gümüş, Zeynep H., Heiman, David, Hong, Runyu, Hu, Yingwei, Jaehnig, Eric J., Ji, Jiayi, Jiang, Wen, Ketchum, Karen A., Klein, Robert J., Liao, Yuxing, Lindgren, Caleb M., Ma, Weiping, Ma, Lei, MacCoss, Michael J., Martins Rodrigues, Fernanda, Nguyen, Ngoc, Oldroyd, Robert, Reva, Boris, Rudnick, Paul, Savage, Sara R., Schnaubelt, Michael, Schraink, Tobias, Shi, Zhiao, Singhal, Deepak, Storrs, Erik, Thangudu, Ratna R., Thiagarajan, Mathangi, Wang, Liang-Bo, Wang, Joshua M., Wen, Bo, Wu, Yige, Wyczalkowski, Matthew A., Xin, Yi, Yao, Lijun, Zhang, Hui, Zhang, Qing, Getz, Gad, Ding, Li, Nesvizhskii, Alexey I., Robles, Ana I., Payne, Samuel H., Lazar, Alexander J., Paulovich, Amanda G., Iavarone, Antonio, Chinnaiyan, Arul M., Druker, Brian J., Kumar-Sinha, Chandan, Newton, Chelsea J., Smith, Richard D., Huntsman, Emily, Schadt, Eric E., An, Eunkyung, Petralia, Francesca, Cho, Hanbyul, Rodriguez, Henry, Zhang, Hui, Kolodziejczak, Iga, Johnson, Jared L., Bavarva, Jasmin, Tan, Jimin, Clauser, Karl R., Krug, Karsten, Cantley, Lewis C., Wiznerowicz, Maciej, Anurag, Meenakshi, Mesri, Mehdi, Gillette, Michael A., Birrer, Michael J., Ceccarelli, Michele, Dhanasekaran, Saravana M., Edwards, Nathan, Tignor, Nicole, Babur, Özgün, Pugliese, Pietro, Jewell, Scott D., Satpathy, Shankha, Chowdhury, Shrabanti, Schürer, Stephan, Carr, Steven A., Hiltke, Tara, Yaron, Tomer M., Liu, Wenke, Song, Yizhe, Zhang, Zhen

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Pan-cancer proteogenomics connects oncogenic drivers to functional states von Porta-Pardo, Eduard, Bailey, Matthew H., Yaron, Tomer M., Stathias, Vasileios, Geffen, Yifat, Imbach, Kathleen J., Cao, Song, Anand, Shankara, Akiyama, Yo, Liu, Wenke, Wyczalkowski, Matthew A., Song, Yizhe, Storrs, Erik P., Wendl, Michael C., Zhang, Wubing, Sibai, Mustafa, Ruiz-Serra, Victoria, Terekhanova, Nadezhda V., Rodrigues, Fernanda Martins, Clauser, Karl R., Heiman, David I., Zhang, Qing, Aguet, Francois, Calinawan, Anna P., Birger, Chet, Satpathy, Shankha, Zhou, Daniel Cui, Wang, Liang-Bo, Baral, Jessika, Johnson, Jared L., Huntsman, Emily M., Pugliese, Pietro, Colaprico, Antonio, Iavarone, Antonio, Ricketts, Christopher J., Fenyö, David, Payne, Samuel H., Kumar-Sinha, Chandan, Lazar, Alexander J., Getz, Gad, An, Eunkyung, Anurag, Meenakshi, Bavarva, Jasmin, Birrer, Michael J., Calinawan, Anna, Ceccarelli, Michele, Chan, Daniel W., Chinnaiyan, Arul M., Cho, Hanbyul, Chowdhury, Shrabanti, Day, Corbin, Domagalski, Marcin J., Dou, Yongchao, Druker, Brian J., Edwards, Nathan, Selvan, Myvizhi Esai, Foltz, Steven M., Gonzalez Robles, Tania J., Gümüş, Zeynep H., Hiltke, Tara, Hostetter, Galen, Hu, Yingwei, Huang, Chen, Huntsman, Emily, Jaehnig, Eric J., Jewel, Scott D., Ji, Jiayi, Jiang, Wen, Katsnelson, Lizabeth, Ketchum, Karen A., Kolodziejczak, Iga, Lei, Jonathan T., Liao, Yuxing, Lindgren, Caleb M., Liu, Tao, Ma, Weiping, McKerrow, Wilson, Nesvizhskii, Alexey I., Oldroyd, Robert, Omenn, Gilbert S., Petralia, Francesca, Reva, Boris, Rodland, Karin D., Ruggles, Kelly V., Rykunov, Dmitry, Savage, Sara R., Schadt, Eric E., Schraink, Tobias, Shi, Zhiao, Smith, Richard D., Song, Xiaoyu, Tan, Jimin, Wang, Joshua M., Wang, Pei, Wen, Bo, Wiznerowicz, Maciej, Yi, Xinpei, Zhang, Bing, Zhang, Xu, Zhang, Zhen

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Pan-cancer proteogenomics characterization of tumor immunity von Yaron, Tomer M., Caruso, Francesca Pia, Tignor, Nicole, Wang, Joshua M., Charytonowicz, Daniel, Johnson, Jared L., Huntsman, Emily M., Marino, Giacomo B., Calinawan, Anna, Evangelista, John Erol, Selvan, Myvizhi Esai, Chowdhury, Shrabanti, Krek, Azra, Song, Xiaoyu, Turhan, Berk, Lewis, David A., Deng, Eden Z., Clarke, Daniel J.B., Whiteaker, Jeffrey R., Kennedy, Jacob J., Zhao, Lei, Segura, Rossana Lazcano, Batra, Harsh, Raso, Maria Gabriela, Parra, Edwin Roger, Soundararajan, Rama, Tang, Ximing, Satpathy, Shankha, Wang, Ying, Wiznerowicz, Maciej, Iavarone, Antonio, Reva, Boris, Robles, Ana I., Mani, D.R., Gillette, Michael A., Cieslik, Marcin, Paulovich, Amanda G., Sebra, Robert, Gümüş, Zeynep H., Hostetter, Galen, Fenyö, David, Cantley, Lewis C., Lazar, Alexander J., Wang, Pei, Abelin, Jennifer, Akiyama, Yo, Anurag, Meenakshi, Bavarva, Jasmin, Birger, Chet, Chinnaiyan, Arul M., Cho, Hanbyul, Clauser, Karl, Colaprico, Antonio, da Veiga Leprevost, Felipe, Day, Corbin, Dhanasekaran, Saravana M., Ding, Li, Dou, Yongchao, Druker, Brian J., Edwards, Nathan, Foltz, Steven M., Francis, Alicia, Geffen, Yifat, Heiman, David I., Hu, Yingwei, Jaehnig, Eric J., Katsnelson, Lizabeth, Ketchum, Karen A., Kolodziejczak, Iga, Krug, Karsten, Lei, Jonathan T., Liang, Wen-Wei, Liao, Yuxing, Liu, Tao, Liu, Wenke, McKerrow, Wilson, Mesri, Mehdi, Mumphrey, Michael Brodie, Newton, Chelsea J., Payne, Samuel H., Rodland, Karin D., Rodrigues, Fernanda Martins, Savage, Sara R., Schnaubelt, Michael, Schürer, Stephan, Shi, Zhiao, Smith, Richard D., Song, Feng, Storrs, Erik P., Tan, Jimin, Terekhanova, Nadezhda V., Thangudu, Ratna R., Thiagarajan, Mathangi, Wu, Yige, Wyczalkowski, Matthew A., Yao, Lijun, Li, Qing Kay, Zhang, Hui, Zhang, Xu, Zhang, Zhen

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Deep learning integrates histopathology and proteogenomics at a pan-cancer level von Wang, Joshua M, Hong, Runyu, Demicco, Elizabeth G, Tan, Jimin, Lazcano, Rossana, Moreira, Andre L, Li, Yize, Calinawan, Anna, Razavian, Narges, Schraink, Tobias, Gillette, Michael A, Omenn, Gilbert S, An, Eunkyung, Rodriguez, Henry, Tsirigos, Aristotelis, Ruggles, Kelly V, Ding, Li, Robles, Ana I, Mani, D R, Rodland, Karin D, Lazar, Alexander J, Liu, Wenke, Fenyö, David

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Pan-cancer proteogenomics connects oncogenic drivers to functional states von Li, Yize, Porta-Pardo, Eduard, Tokheim, Collin, Bailey, Matthew H, Yaron, Tomer, Geffen, Yifat, Imbach, Kathleen, Cao, Song, Anand, Shankara, Akiyama, Yo, Liu, Wenke, Wyczalkowski, Matthew A, Song, Yizhe, Sibai, Mustafa, Liang, Wen-Wei, Terekhanova, Nadezhda V, Martins Rodrigues, Fernanda, Clauser, Karl R, Heiman, David I, Aguet, Francois, Calinawan, Anna Pamela, Dhanasekaran, Saravana Mohan, Birger, Chet, Wang, Liang-Bo, Baral, Jessika, Johnson, Jared L, Huntsman, Emily M, Pugliese, Pietro, Colaprico, Antonio, Iavarone, Antonio, Chheda, Milan G, Ricketts, Christopher J, Fenyö, David, Payne, Samuel H, Rodriguez, Henry, Lazar, Alexander, Cantley, Lewis, Getz, Gad A, Ding, Li, An, Eunkyung, Anurag, Meenakshi, Bavarva, Jasmin, Birrer, Michael J, Ceccarelli, Michele, Cho, Hanbyul, Chowdhury, Shrabanti, Cieslik, Marcin P, Day, Corbin, Domagalski, Marcin J, Dou, Yongchao, Druker, Brian J, Edwards, Nathan, Ellis, Matthew J, Selvan, Myvizhi Esai, Foltz, Steven M, Gonzalez Robles, Tania J, Gosline, Sara J. C, Hiltke, Tara, Hong, Runyu, Hostetter, Galen, Hu, Yingwei, Huntsman, Emily, Jaehnig, Eric J, Jewel, Scott D, Jiang, Wen, Katsnelson, Lizabeth, Ketchum, Karen A, Lei, Jonathan T, Liao, Yuxing, Lindgren, Caleb M, Liu, Tao, Ma, Weiping, Nesvizhskii, Alexey I, Newton, Chelsea, Oldroyd, Robert, Omenn, Gilbert S, Paulovich, Amanda G, Petralia, Francesca, Reva, Boris, Rodland, Karin D, Ruggles, Kelly V, Rykunov, Dmitry, Savage, Sara R, Schadt, Eric E, Schnaubelt, Michael, Schraink, Tobias, Shi, Zhiao, Smith, Richard D, Song, Xiaoyu, Thangudu, Ratna R, Tignor, Nicole, Wang, Joshua M, Wang, Pei, Wang, Ying Cindy, Wen, Bo, Wiznerowicz, Maciej, Yi, Xinpei, Zhang, Bing, Zhang, Hui, Zhang, Xu

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