Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities von Logares, Ramiro, Sunagawa, Shinichi, Salazar, Guillem, Cornejo‐Castillo, Francisco M, Ferrera, Isabel, Sarmento, Hugo, Hingamp, Pascal, Ogata, Hiroyuki, Vargas, Colomban, Lima‐Mendez, Gipsi, Raes, Jeroen, Poulain, Julie, Jaillon, Olivier, Wincker, Patrick, Kandels‐Lewis, Stefanie, Karsenti, Eric, Bork, Peer, Acinas, Silvia G

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Cross-biome comparison of microbial association networks von Faust, Karoline, Lima-Mendez, Gipsi, Lerat, Jean-Sébastien, Sathirapongsasuti, Jarupon F, Knight, Rob, Huttenhower, Curtis, Lenaerts, Tom, Raes, Jeroen

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ACLAME: a CLAssification of Mobile genetic Elements, update 2010 von Leplae, Raphaël, Lima-Mendez, Gipsi, Toussaint, Ariane

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Population-level analysis of Blastocystis subtype prevalence and variation in the human gut microbiota von Tito, Raul Y, Chaffron, Samuel, Caenepeel, Clara, Lima-Mendez, Gipsi, Wang, Jun, Vieira-Silva, Sara, Falony, Gwen, Hildebrand, Falk, Darzi, Youssef, Rymenans, Leen, Verspecht, Chloë, Bork, Peer, Vermeire, Severine, Joossens, Marie, Raes, Jeroen

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first global analysis of plasmid encoded proteins in the ACLAME database von Leplae, Raphaël, Lima-Mendez, Gipsi, Toussaint, Ariane

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Rhizomania: Hide and Seek of Polymyxa betae and the Beet Necrotic Yellow Vein Virus with Beta vulgaris von Decroës, Alain, Mahillon, Mathieu, Genard, Margaux, Lienard, Charlotte, Lima-Mendez, Gipsi, Gilmer, David, Bragard, Claude, Legrève, Anne

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The powerful law of the power law and other myths in network biology von Lima-Mendez, Gipsi, van Helden, Jacques

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Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes von Hingamp, Pascal, Grimsley, Nigel, Acinas, Silvia G, Clerissi, Camille, Subirana, Lucie, Poulain, Julie, Ferrera, Isabel, Sarmento, Hugo, Villar, Emilie, Lima-Mendez, Gipsi, Faust, Karoline, Sunagawa, Shinichi, Claverie, Jean-Michel, Moreau, Hervé, Desdevises, Yves, Bork, Peer, Raes, Jeroen, de Vargas, Colomban, Karsenti, Eric, Kandels-Lewis, Stefanie, Jaillon, Olivier, Not, Fabrice, Pesant, Stéphane, Wincker, Patrick, Ogata, Hiroyuki

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Prophinder: a computational tool for prophage prediction in prokaryotic genomes von Lima-Mendez, Gipsi, Van Helden, Jacques, Toussaint, Ariane, Leplae, Raphaël

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Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton von Cornejo-Castillo, Francisco M., Cabello, Ana M., Salazar, Guillem, Sánchez-Baracaldo, Patricia, Lima-Mendez, Gipsi, Hingamp, Pascal, Alberti, Adriana, Sunagawa, Shinichi, Bork, Peer, de Vargas, Colomban, Raes, Jeroen, Bowler, Chris, Wincker, Patrick, Zehr, Jonathan P., Gasol, Josep M., Massana, Ramon, Acinas, Silvia G.

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Disentangling environmental effects in microbial association networks von Deutschmann, Ina Maria, Lima-Mendez, Gipsi, Krabberod, Anders K., Raes, Jeroen, Vallina, Sergio M., Faust, Karoline, Logares, Ramiro

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Meeting Report of the Second Symposium of the Belgian Society for Viruses of Microbes and Launch of the Phage Valley von Desmecht, Salomé, Latka, Agnieszka, Ceyssens, Pieter-Jan, Garcia-Pino, Abel, Gillis, Annika, Lavigne, Rob, Lima-Mendez, Gipsi, Matthijnssens, Jelle, Vázquez, Roberto, Venneman, Jolien, Wagemans, Jeroen, Briers, Yves, Thiry, Damien

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HOXA1 Is an Antagonist of ERα in Breast Cancer von Belpaire, Magali, Ewbank, Bruno, Taminiau, Arnaud, Bridoux, Laure, Deneyer, Noemie, Marchese, Damien, Lima-Mendez, Gipsi, Baurain, Jean-Francois, Geerts, Dirk, Rezsohazy, Rene

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Foundation of the Belgian Society for Viruses of Microbes and Meeting Report of Its Inaugural Symposium von Latka, Agnieszka, Aertsen, Abram, Boeckaerts, Dimitri, Blasdel, Bob, Ceyssens, Pieter-Jan, Garcia-Pino, Abel, Gillis, Annika, Lavigne, Rob, Lima-Mendez, Gipsi, Matthijnssens, Jelle, Onsea, Jolien, Peeters, Eveline, Pirnay, Jean-Paul, Thiry, Damien, Vandenheuvel, Dieter, Van Mechelen, Els, Venneman, Jolien, Verbeken, Gilbert, Wagemans, Jeroen, Briers, Yves

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Correction to: Disentangling environmental effects in microbial association networks von Deutschmann, Ina Maria, Lima-Mendez, Gipsi, Krabberød, Anders K, Raes, Jeroen, Vallina, Sergio M, Faust, Karoline, Logares, Ramiro

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Mainstreams of horizontal gene exchange in enterobacteria: consideration of the outbreak of enterohemorrhagic E. coli O104:H4 in Germany in 2011 von Bezuidt, Oliver, Pierneef, Rian, Mncube, Kingdom, Lima-Mendez, Gipsi, Reva, Oleg N

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At the Gate of Mutualism: Identification of Genomic Traits Predisposing to Insect-Bacterial Symbiosis in Pathogenic Strains of the Aphid Symbiont Serratia symbiotica von Renoz, Francois, Foray, Vincent, Ambroise, Jerome, Baa-Puyoulet, Patrice, Bearzatto, Bertrand, Mendez, Gipsi Lima, Grigorescu, Alina S., Mahillon, Jacques, Mardulyn, Patrick, Gala, Jean-Luc, Calevro, Federica, Hance, Thierry

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Analysis of the phage sequence space: The benefit of structured information von Lima-Mendez, Gipsi, Toussaint, Ariane, Leplae, Raphaël

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Comparative Analyses of Prophage-Like Elements Present in Bifidobacterial Genomes von Ventura, Marco, Turroni, Francesca, Lima-Mendez, Gipsi, Foroni, Elena, Zomer, Aldert, Duranti, Sabrina, Giubellini, Vanessa, Bottacini, Francesca, Horvath, Philippe, Barrangou, Rodolphe, Sela, David A, Mills, David A, van Sinderen, Douwe

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Towards a more accurate annotation of tyrosine-based site-specific recombinases in bacterial genomes von Van Houdt, Rob, Leplae, Raphael, Lima-Mendez, Gipsi, Mergeay, Max, Toussaint, Ariane

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