Simulation of DNA Supercoil Relaxation von Ivenso, Ikenna D., Lillian, Todd D.

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Modal Analysis of Electric sail von Lillian, Todd D.

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A Multiscale Dynamic Model of DNA Supercoil Relaxation by Topoisomerase IB von Lillian, Todd D., Taranova, Maryna, Wereszczynski, Jeff, Andricioaei, Ioan, Perkins, N.C.

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Traveling Salesman Finds Random Walk: A Curve Reconstruction Algorithm for Supercoiled DNA von Babamohammadi, Saeed, Lillian, Todd D.

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Structural Ensemble and Dynamics of Toroidal-like DNA Shapes in Bacteriophage ϕ29 Exit Cavity von Hirsh, Andrew D., Taranova, Maryna, Lionberger, Troy A., Lillian, Todd D., Andricioaei, Ioan, Perkins, N.C.

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DNA Modeling Reveals an Extended Lac Repressor Conformation in Classic In Vitro Binding Assays von Hirsh, Andrew D., Lillian, Todd D., Lionberger, Troy A., Perkins, N.C.

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FRET studies of a landscape of Lac repressor-mediated DNA loops von Haeusler, Aaron R, Goodson, Kathy A, Lillian, Todd D, Wang, Xiaoyu, Goyal, Sachin, Perkins, Noel C, Kahn, Jason D

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A compliant end-effector for microscribing von Cannon, Bennion R., Lillian, Todd D., Magleby, Spencer P., Howell, Larry L., Linford, Matthew R.

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Computational Analysis of Looping of a Large Family of Highly Bent DNA by LacI von Lillian, Todd D., Goyal, Sachin, Kahn, Jason D., Meyhöfer, Edgar, Perkins, N.C.

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Computational Analysis of Looping of a Large Family of Highly Bent DNA by Lacl von Lillian, Todd D, Goyal, Sachin, Kahn, Jason D, Meyhöfer, Edgar, Perkins, N C

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Electrostatics and Self-Contact in an Elastic Rod Approximation for DNA von Lillian, Todd D, Perkins, N. C

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A Model for Highly Strained DNA Compressed Inside a Protein Cavity von Hirsh, Andrew D, Lillian, Todd D, Lionberger, Troy A, Taranova, Maryna, Andricioaei, Ioan, Perkins, N. C

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An Algorithm for Reconstructing the Dynamics of Supercoiled DNA von Lillian, Todd D., Babamohammadi, Saeed

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Brownian Dynamics Study of DNA Supercoil Relaxation von Ivenso, Ikenna D., Lillian, Todd D.

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Dynamics of Plectonemic Supercoils along Stretched DNA by Brownian Dynamics von Lillian, Todd D., Bell, David

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Supercoil Dynamics along Stretched DNA by Brownian Dynamics von Lillian, Todd D., Bell, David, Polk, Justin

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Supercoil Diffusion along Stretched DNA by Brownian Dynamics von Lillian, Todd D., Ivenso, Ikenna, Bell, David, Polk, Justin

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Simulation of Plectonemic Supercoil Diffusion Along Extended DNA by Brownian Dynamics von Bell, David, Selokar, Pawan, Lillian, Todd D.

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Re-Interpretation of Müller-Hill Experiments on the LacR-DNA Complex Using a Computational Model von Lillian, Todd D., Perkins, Noel C.

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Structural Ensemble and Dynamics of Toroidal-like DNA Shapes in Bacteriophage [phi]29 Exit Cavity von Hirsh, Andrew D, Taranova, Maryna, Lionberger, Troy A, Lillian, Todd D, Andricioaei, Ioan, Perkins, NC

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