H3K27me3-rich genomic regions can function as silencers to repress gene expression via chromatin interactions von Cai, Yichao, Zhang, Ying, Loh, Yan Ping, Tng, Jia Qi, Lim, Mei Chee, Cao, Zhendong, Raju, Anandhkumar, Lieberman Aiden, Erez, Li, Shang, Manikandan, Lakshmanan, Tergaonkar, Vinay, Tucker-Kellogg, Greg, Fullwood, Melissa Jane

Volltext

De novo prediction of human chromosome structures: Epigenetic marking patterns encode genome architecture von Di Pierro, Michele, Cheng, Ryan R., Aiden, Erez Lieberman, Wolynes, Peter G., Onuchic, José N.

Volltext

CTCF loss has limited effects on global genome architecture in Drosophila despite critical regulatory functions von Kaushal, Anjali, Mohana, Giriram, Dorier, Julien, Özdemir, Isa, Omer, Arina, Cousin, Pascal, Semenova, Anastasiia, Taschner, Michael, Dergai, Oleksandr, Marzetta, Flavia, Iseli, Christian, Eliaz, Yossi, Weisz, David, Shamim, Muhammad Saad, Guex, Nicolas, Lieberman Aiden, Erez, Gambetta, Maria Cristina

Volltext

Simple biochemical features underlie transcriptional activation domain diversity and dynamic, fuzzy binding to Mediator von Sanborn, Adrian L., Yeh, Benjamin T., Feigerle, Jordan T., Hao, Cynthia, Townshend, Raphael J. L., Aiden, Erez Lieberman, Dror, Ron O., Kornberg, Roger D.

Volltext

The fundamental role of chromatin loop extrusion in physiological V(D)J recombination von Zhang, Yu, Zhang, Xuefei, Ba, Zhaoqing, Liang, Zhuoyi, Dring, Edward W., Hu, Hongli, Lou, Jiangman, Kyritsis, Nia, Zurita, Jeffrey, Shamim, Muhammad S., Presser Aiden, Aviva, Lieberman Aiden, Erez, Alt, Frederick W.

Volltext

Analysis of Hi-C data using SIP effectively identifies loops in organisms from C. elegans to mammals von Rowley, M. Jordan, Poulet, Axel, Nichols, Michael H., Bixler, Brianna J., Sanborn, Adrian L., Brouhard, Elizabeth A., Hermetz, Karen, Linsenbaum, Hannah, Csankovszki, Gyorgyi, Aiden, Erez Lieberman, Corces, Victor G.

Volltext

ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL von Wutz, Gordana, Ladurner, Rene, St Hilaire, Brian Glenn, Stocsits, Roman R, Nagasaka, Kota, Pignard, Benoit, Sanborn, Adrian, Tang, Wen, Várnai, Csilla, Ivanov, Miroslav P, Schoenfelder, Stefan, van der Lelij, Petra, Huang, Xingfan, Dürnberger, Gerhard, Roitinger, Elisabeth, Mechtler, Karl, Davidson, Iain Finley, Fraser, Peter, Lieberman-Aiden, Erez, Peters, Jan-Michael

Volltext

MCPH1 inhibits Condensin II during interphase by regulating its SMC2-Kleisin interface von Houlard, Martin, Cutts, Erin E, Shamim, Muhammad S, Godwin, Jonathan, Weisz, David, Presser Aiden, Aviva, Lieberman Aiden, Erez, Schermelleh, Lothar, Vannini, Alessandro, Nasmyth, Kim

Volltext

Cohesin depleted cells rebuild functional nuclear compartments after endomitosis von Cremer, Marion, Brandstetter, Katharina, Maiser, Andreas, Rao, Suhas S. P., Schmid, Volker J., Guirao-Ortiz, Miguel, Mitra, Namita, Mamberti, Stefania, Klein, Kyle N., Gilbert, David M., Leonhardt, Heinrich, Cardoso, M. Cristina, Aiden, Erez Lieberman, Harz, Hartmann, Cremer, Thomas

Volltext

Exploring chromosomal structural heterogeneity across multiple cell lines von Cheng, Ryan R., Contessoto, Vinicius G., Aiden, Erez Lieberman, Wolynes, Peter G., Di Pierro, Michele, Onuchic, Jose N.

Volltext

Chromosomal‐level genome assembly of the scimitar‐horned oryx: Insights into diversity and demography of a species extinct in the wild von Humble, Emily, Dobrynin, Pavel, Senn, Helen, Chuven, Justin, Scott, Alan F., Mohr, David W., Dudchenko, Olga, Omer, Arina D., Colaric, Zane, Lieberman Aiden, Erez, Al Dhaheri, Shaikha Salem, Wildt, David, Oliaji, Shireen, Tamazian, Gaik, Pukazhenthi, Budhan, Ogden, Rob, Koepfli, Klaus‐Peter

Volltext

Robust CTCF-Based Chromatin Architecture Underpins Epigenetic Changes in the Heart Failure Stress–Gene Response von Lee, Dominic Paul, Tan, Wilson Lek Wen, Anene-Nzelu, Chukwuemeka George, Lee, Chang Jie Mick, Li, Peter Yiqing, Luu, Tuan Danh Anh, Chan, Cheryl Xueli, Tiang, Zenia, Ng, Shi Ling, Huang, Xingfan, Efthymios, Motakis, Autio, Matias I, Jiang, Jianming, Fullwood, Melissa Jane, Prabhakar, Shyam, Lieberman Aiden, Erez, Foo, Roger Sik-Yin

Volltext

GSDB: a database of 3D chromosome and genome structures reconstructed from Hi-C data von Oluwadare, Oluwatosin, Highsmith, Max, Turner, Douglass, Lieberman-Aiden, Erez, Cheng, Jianlin

Volltext

The Easter Egg Weevil (Pachyrhynchus) genome reveals syntenic patterns in Coleoptera across 200 million years of evolution von Van Dam, Matthew H., Cabras, Analyn Anzano, Henderson, James B., Rominger, Andrew J., Perez Estrada, Cynthia, Omer, Arina D., Dudchenko, Olga, Lieberman Aiden, Erez, Lam, Athena W.

Volltext

Delineating the Tnt1 Insertion Landscape of the Model Legume Medicago truncatula cv. R108 at the Hi-C Resolution Using a Chromosome-Length Genome Assembly von Kaur, Parwinder, Lui, Christopher, Dudchenko, Olga, Nandety, Raja Sekhar, Hurgobin, Bhavna, Pham, Melanie, Lieberman Aiden, Erez, Wen, Jiangqi, Mysore, Kirankumar S.

Volltext

The expanding scope of DNA sequencing von Shendure, Jay, Aiden, Erez Lieberman

Volltext

Chromosome-length genome assembly and linkage map of a critically endangered Australian bird: the helmeted honeyeater von Robledo-Ruiz, Diana A, Gan, Han Ming, Kaur, Parwinder, Dudchenko, Olga, Weisz, David, Khan, Ruqayya, Lieberman Aiden, Erez, Osipova, Ekaterina, Hiller, Michael, Morales, Hernán E, Magrath, Michael J L, Clarke, Rohan H, Sunnucks, Paul, Pavlova, Alexandra

Volltext

Chromatin Is Frequently Unknotted at the Megabase Scale von Goundaroulis, Dimos, Lieberman Aiden, Erez, Stasiak, Andrzej

Volltext

Using deep learning and Google Street View to estimate the demographic makeup of neighborhoods across the United States von Gebru, Timnit, Krause, Jonathan, Wang, Yilun, Chen, Duyun, Deng, Jia, Aiden, Erez Lieberman, Fei-Fei, Li

Volltext

Hi-C chromosome conformation capture sequencing of avian genomes using the BGISEQ-500 platform von Sandoval-Velasco, Marcela, Rodríguez, Juan Antonio, Perez Estrada, Cynthia, Zhang, Guojie, Lieberman Aiden, Erez, Marti-Renom, Marc A, Gilbert, M Thomas P, Smith, Oliver

Volltext