Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics von Libin, Pieter J K, Willem, Lander, Verstraeten, Timothy, Torneri, Andrea, Vanderlocht, Joris, Hens, Niel

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The impact of contact tracing and household bubbles on deconfinement strategies for COVID-19 von Willem, Lander, Abrams, Steven, Libin, Pieter J. K., Coletti, Pietro, Kuylen, Elise, Petrof, Oana, Møgelmose, Signe, Wambua, James, Herzog, Sereina A., Faes, Christel, Beutels, Philippe, Hens, Niel

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Multi-Agent Thompson Sampling for Bandit Applications with Sparse Neighbourhood Structures von Verstraeten, Timothy, Bargiacchi, Eugenio, Libin, Pieter J. K., Helsen, Jan, Roijers, Diederik M., Nowé, Ann

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VIRULIGN: fast codon-correct alignment and annotation of viral genomes von Libin, Pieter J K, Deforche, Koen, Abecasis, Ana B, Theys, Kristof

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Different forms of superspreading lead to different outcomes: Heterogeneity in infectiousness and contact behavior relevant for the case of SARS-CoV-2 von Kuylen, Elise J, Torneri, Andrea, Willem, Lander, Libin, Pieter J K, Abrams, Steven, Coletti, Pietro, Franco, Nicolas, Verelst, Frederik, Beutels, Philippe, Liesenborgs, Jori, Hens, Niel

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The impact of quality-adjusted life years on evaluating COVID-19 mitigation strategies: lessons from age-specific vaccination roll-out and variants of concern in Belgium (2020-2022... von Willem, Lander, Abrams, Steven, Franco, Nicolas, Coletti, Pietro, Libin, Pieter J K, Wambua, James, Couvreur, Simon, André, Emmanuel, Wenseleers, Tom, Mao, Zhuxin, Torneri, Andrea, Faes, Christel, Beutels, Philippe, Hens, Niel

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An Evolutionary Model-Based Approach To Quantify the Genetic Barrier to Drug Resistance in Fast-Evolving Viruses and Its Application to HIV-1 Subtypes and Integrase Inhibitors von Theys, Kristof, Libin, Pieter J K, Van Laethem, Kristel, Abecasis, Ana B

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A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes von Fonseca, Vagner, Libin, Pieter J K, Theys, Kristof, Faria, Nuno R, Nunes, Marcio R T, Restovic, Maria I, Freire, Murilo, Giovanetti, Marta, Cuypers, Lize, Nowé, Ann, Abecasis, Ana, Deforche, Koen, Santiago, Gilberto A, Siqueira, Isadora C de, San, Emmanuel J, Machado, Kaliane C B, Azevedo, Vasco, Filippis, Ana Maria Bispo-de, Cunha, Rivaldo Venâncio da, Pybus, Oliver G, Vandamme, Anne-Mieke, Alcantara, Luiz C J, de Oliveira, Tulio

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Controlling SARS-CoV-2 in schools using repetitive testing strategies von Torneri, Andrea, Willem, Lander, Colizza, Vittoria, Kremer, Cécile, Meuris, Christelle, Darcis, Gilles, Hens, Niel, Libin, Pieter J K

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Scalar reward is not enough: a response to Silver, Singh, Precup and Sutton (2021) von Vamplew, Peter, Smith, Benjamin J., Källström, Johan, Ramos, Gabriel, Rădulescu, Roxana, Roijers, Diederik M., Hayes, Conor F., Heintz, Fredrik, Mannion, Patrick, Libin, Pieter J. K., Dazeley, Richard, Foale, Cameron

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Comparison of two simulators for individual based models in HIV epidemiology in a population with HSV 2 in Yaoundé (Cameroon) von Hendrickx, Diana M., Sousa, João Dinis, Libin, Pieter J. K., Delva, Wim, Liesenborgs, Jori, Hens, Niel, Müller, Viktor, Vandamme, Anne-Mieke

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Model-based disease mapping using primary care registry data von Janssens, Arne, Vaes, Bert, Van Pottelbergh, Gijs, Libin, Pieter J.K., Neyens, Thomas

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A prospect on the use of antiviral drugs to control local outbreaks of COVID-19 von Torneri, Andrea, Libin, Pieter, Vanderlocht, Joris, Vandamme, Anne-Mieke, Neyts, Johan, Hens, Niel

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Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research von Hufsky, Franziska, Lamkiewicz, Kevin, Almeida, Alexandre, Aouacheria, Abdel, Arighi, Cecilia, Bateman, Alex, Baumbach, Jan, Beerenwinkel, Niko, Brandt, Christian, Cacciabue, Marco, Chuguransky, Sara, Drechsel, Oliver, Finn, Robert D, Fritz, Adrian, Fuchs, Stephan, Hattab, Georges, Hauschild, Anne-Christin, Heider, Dominik, Hoffmann, Marie, Hölzer, Martin, Hoops, Stefan, Kaderali, Lars, Kalvari, Ioanna, von Kleist, Max, Kmiecinski, Renó, Kühnert, Denise, Lasso, Gorka, Libin, Pieter, List, Markus, Löchel, Hannah F, Martin, Maria J, Martin, Roman, Matschinske, Julian, McHardy, Alice C, Mendes, Pedro, Mistry, Jaina, Navratil, Vincent, Nawrocki, Eric P, O’Toole, Áine Niamh, Ontiveros-Palacios, Nancy, Petrov, Anton I, Rangel-Pineros, Guillermo, Redaschi, Nicole, Reimering, Susanne, Reinert, Knut, Reyes, Alejandro, Richardson, Lorna, Robertson, David L, Sadegh, Sepideh, Singer, Joshua B, Theys, Kristof, Upton, Chris, Welzel, Marius, Williams, Lowri, Marz, Manja

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On realized serial and generation intervals given control measures: The COVID-19 pandemic case von Torneri, Andrea, Libin, Pieter, Scalia Tomba, Gianpaolo, Faes, Christel, Wood, James G, Hens, Niel

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Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: Performance evaluation of the new REGA version 3 and seven other tools von Pineda-Peña, Andrea-Clemencia, Faria, Nuno Rodrigues, Imbrechts, Stijn, Libin, Pieter, Abecasis, Ana Barroso, Deforche, Koen, Gómez-López, Arley, Camacho, Ricardo J., de Oliveira, Tulio, Vandamme, Anne-Mieke

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A Tale of Three Recent Pandemics: Influenza, HIV and SARS-CoV-2 von Miranda, Mafalda N. S., Pingarilho, Marta, Pimentel, Victor, Torneri, Andrea, Seabra, Sofia G., Libin, Pieter J. K., Abecasis, Ana B.

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A data-driven metapopulation model for the Belgian COVID-19 epidemic: assessing the impact of lockdown and exit strategies von Coletti, Pietro, Libin, Pieter, Petrof, Oana, Willem, Lander, Abrams, Steven, Herzog, Sereina A, Faes, Christel, Kuylen, Elise, Wambua, James, Beutels, Philippe, Hens, Niel

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Modelling the early phase of the Belgian COVID-19 epidemic using a stochastic compartmental model and studying its implied future trajectories von Abrams, Steven, Wambua, James, Santermans, Eva, Willem, Lander, Kuylen, Elise, Coletti, Pietro, Libin, Pieter, Faes, Christel, Petrof, Oana, Herzog, Sereina A., Beutels, Philippe, Hens, Niel

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Reconstruction of SARS-CoV-2 outbreaks in a primary school using epidemiological and genomic data von Kremer, Cécile, Torneri, Andrea, Libin, Pieter J.K., Meex, Cécile, Hayette, Marie-Pierre, Bontems, Sébastien, Durkin, Keith, Artesi, Maria, Bours, Vincent, Lemey, Philippe, Darcis, Gilles, Hens, Niel, Meuris, Christelle

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