The SeqFEATURE library of 3D functional site models: comparison to existing methods and applications to protein function annotation von Wu, Shirley, Liang, Mike P, Altman, Russ B

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WebFEATURE: an interactive web tool for identifying and visualizing functional sites on macromolecular structures von Liang, Mike P., Banatao, D. Rey, Klein, Teri E., Brutlag, Douglas L., Altman, Russ B.

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Local Kinetic Measures of Macromolecular Structure Reveal Partitioning among Multiple Parallel Pathways from the Earliest Steps in the Folding of a Large RNA Molecule von Laederach, Alain, Shcherbakova, Inna, Liang, Mike P., Brenowitz, Michael, Altman, Russ B.

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Sensitivity trends of SeqFEATURE, Gene3D, Pfam, and HMMPanther at low sequence identities von Wu, Shirley, Liang, Mike P, Altman, Russ B

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Local environments of SeqFEATURE predictions for three TargetDB structures with unknown function von Wu, Shirley, Liang, Mike P, Altman, Russ B

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Distribution of AUC and sensitivity for all SeqFEATURE models listed in Table 2 von Wu, Shirley, Liang, Mike P, Altman, Russ B

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Summary performance on PROSITE true positives (TP), false positives (FP), and false negative (FN) test sites von Wu, Shirley, Liang, Mike P, Altman, Russ B

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Example ROC curves, precision-recall curves, and Z-score distributions for SeqFEATURE models von Wu, Shirley, Liang, Mike P, Altman, Russ B

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Performance on PROSITE true positives, false positives, and false negative test sites von Wu, Shirley, Liang, Mike P, Altman, Russ B

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Computational functional genomics von Liang, M.P., Troyanskaya, O.G., Laederach, A., Brutlag, D.L., Altman, R.B.

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A Randomized Trial Comparing Antibiotics with Appendectomy for Appendicitis von Flum, David R, Davidson, Giana H, Monsell, Sarah E, Shapiro, Nathan I, Odom, Stephen R, Sanchez, Sabrina E, Drake, F Thurston, Fischkoff, Katherine, Johnson, Jeffrey, Patton, Joe H, Evans, Heather, Cuschieri, Joseph, Sabbatini, Amber K, Faine, Brett A, Skeete, Dionne A, Liang, Mike K, Sohn, Vance, McGrane, Karen, Kutcher, Matthew E, Chung, Bruce, Carter, Damien W, Ayoung-Chee, Patricia, Chiang, William, Rushing, Amy, Steinberg, Steven, Foster, Careen S, Schaetzel, Shaina M, Price, Thea P, Mandell, Katherine A, Ferrigno, Lisa, Salzberg, Matthew, DeUgarte, Daniel A, Kaji, Amy H, Moran, Gregory J, Saltzman, Darin, Alam, Hasan B, Park, Pauline K, Kao, Lillian S, Thompson, Callie M, Self, Wesley H, Yu, Julianna T, Wiebusch, Abigail, Winchell, Robert J, Clark, Sunday, Krishnadasan, Anusha, Fannon, Erin, Lavallee, Danielle C, Comstock, Bryan A, Bizzell, Bonnie, Heagerty, Patrick J, Kessler, Larry G, Talan, David A

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Ventral Hernia Management: Expert Consensus Guided by Systematic Review von Liang, Mike K, Holihan, Julie L, Itani, Kamal, Alawadi, Zeinab M, Gonzalez, Juan R Flores, Askenasy, Erik P, Ballecer, Conrad, Chong, Hui Sen, Goldblatt, Matthew I, Greenberg, Jacob A, Harvin, John A, Keith, Jerrod N, Martindale, Robert G, Orenstein, Sean, Richmond, Bryan, Roth, John Scott, Szotek, Paul, Towfigh, Shirin, Tsuda, Shawn, Vaziri, Khashayar, Berger, David H

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Ventral Hernia Management: Expert Consensus Guided by Systematic Review von Liang, Mike K, Holihan, Julie L, Itani, Kamal, Alawadi, Zeinab M, Gonzalez, Juan R Flores, Askenasy, Erik P, Ballecer, Conrad, Chong, Hui Sen, Goldblatt, Matthew I, Greenberg, Jacob A, Harvin, John A, Keith, Jerrod N, Martindale, Robert G, Orenstein, Sean, Richmond, Bryan, Roth, John Scott, Szotek, Paul, Towfigh, Shirin, Tsuda, Shawn, Vaziri, Khashayar, Berger, David H

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Durum wheat genome highlights past domestication signatures and future improvement targets von Maccaferri, Marco, Harris, Neil S., Twardziok, Sven O., Pasam, Raj K., Gundlach, Heidrun, Spannagl, Manuel, Ormanbekova, Danara, Lux, Thomas, Prade, Verena M., Milner, Sara G., Himmelbach, Axel, Mascher, Martin, Bagnaresi, Paolo, Faccioli, Primetta, Cozzi, Paolo, Lauria, Massimiliano, Lazzari, Barbara, Stella, Alessandra, Manconi, Andrea, Gnocchi, Matteo, Moscatelli, Marco, Avni, Raz, Deek, Jasline, Biyiklioglu, Sezgi, Frascaroli, Elisabetta, Corneti, Simona, Salvi, Silvio, Sonnante, Gabriella, Desiderio, Francesca, Marè, Caterina, Crosatti, Cristina, Mica, Erica, Özkan, Hakan, Kilian, Benjamin, De Vita, Pasquale, Marone, Daniela, Joukhadar, Reem, Mazzucotelli, Elisabetta, Nigro, Domenica, Gadaleta, Agata, Chao, Shiaoman, Faris, Justin D., Melo, Arthur T. O., Pumphrey, Mike, Pecchioni, Nicola, Milanesi, Luciano, Wiebe, Krystalee, Ens, Jennifer, MacLachlan, Ron P., Clarke, John M., Sharpe, Andrew G., Koh, Chu Shin, Liang, Kevin Y. H., Taylor, Gregory J., Knox, Ron, Budak, Hikmet, Mastrangelo, Anna M., Xu, Steven S., Stein, Nils, Hale, Iago, Distelfeld, Assaf, Hayden, Matthew J., Tuberosa, Roberto, Walkowiak, Sean, Mayer, Klaus F. X., Ceriotti, Aldo, Pozniak, Curtis J., Cattivelli, Luigi

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Primary Fascial Closure With Laparoscopic Ventral Hernia Repair: Systematic Review von Nguyen, Duyen H., Nguyen, Mylan T., Askenasy, Erik P., Kao, Lillian S., Liang, Mike K.

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Do Risk Calculators Accurately Predict Surgical Site Occurrences? von Mitchell, Thomas O., BA, Holihan, Julie L., MD, Askenasy, Erik P., MD, Greenberg, Jacob A., MD, Keith, Jerrod N., MD, Martindale, Robert G., MD PhD, Roth, J. Scott, MD, Liang, Mike K., MD

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Suture, synthetic, or biologic in contaminated ventral hernia repair von Bondre, Ioana L., BS, Holihan, Julie L., MD, Askenasy, Erik P., MD, Greenberg, Jacob A., MD, EdM, Keith, Jerrod N., MD, Martindale, Robert G., MD, PhD, Roth, J. Scott, MD, Liang, Mike K., MD

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MMP20-generated amelogenin cleavage products prevent formation of fan-shaped enamel malformations von Bartlett, John D., Smith, Charles E., Hu, Yuanyuan, Ikeda, Atsushi, Strauss, Mike, Liang, Tian, Hsu, Ya-Hsiang, Trout, Amanda H., McComb, David W., Freeman, Rebecca C., Simmer, James P., Hu, Jan C.-C.

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Antibiotics versus Appendectomy for Acute Appendicitis — Longer-Term Outcomes von Davidson, Giana H, Flum, David R, Monsell, Sarah E, Kao, Lillian S, Voldal, Emily C, Heagerty, Patrick J, Fannon, Erin, Lavallee, Danielle C, Bizzell, Bonnie, Lawrence, Sarah O, Comstock, Bryan A, Krishnadasan, Anusha, Winchell, Robert J, Self, Wesley H, Thompson, Callie M, Farjah, Farhood, Park, Pauline K, Alam, Hasan B, Saltzman, Darin, Moran, Gregory J, Kaji, Amy H, DeUgarte, Daniel A, Salzberg, Matthew, Ferrigno, Lisa, Mandell, Katherine A, Price, Thea P, Siparsky, Nicole, Glaser, Jacob, Ayoung-Chee, Patricia, Chiang, William, Victory, Jesse, Chung, Bruce, Carter, Damien W, Kutcher, Matthew E, Jones, Alan, Holihan, Julie, Liang, Mike K, Faine, Brett A, Cuschieri, Joseph, Evans, Heather L, Johnson, Jeffrey, Patton, Joe H, Coleman, Natasha, Fischkoff, Katherine, Drake, F Thurston, Sanchez, Sabrina E, Parsons, Charles, Odom, Stephen R, Kessler, Larry G, Talan, David A

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A protein engineered to bind uranyl selectively and with femtomolar affinity von Zhou, Lu, Bosscher, Mike, Zhang, Changsheng, Özçubukçu, Salih, Zhang, Liang, Zhang, Wen, Li, Charles J., Liu, Jianzhao, Jensen, Mark P., Lai, Luhua, He, Chuan

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