Analysis and comparison of very large metagenomes with fast clustering and functional annotation von Li, Weizhong

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Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences von Li, Weizhong, Godzik, Adam

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CD-HIT: accelerated for clustering the next-generation sequencing data von Fu, Limin, Niu, Beifang, Zhu, Zhengwei, Wu, Sitao, Li, Weizhong

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CD-HIT Suite: a web server for clustering and comparing biological sequences von Huang, Ying, Niu, Beifang, Gao, Ying, Fu, Limin, Li, Weizhong

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WebMGA: a customizable web server for fast metagenomic sequence analysis von Wu, Sitao, Zhu, Zhengwei, Fu, Liming, Niu, Beifang, Li, Weizhong

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The EMBL-EBI bioinformatics web and programmatic tools framework von Li, Weizhong, Cowley, Andrew, Uludag, Mahmut, Gur, Tamer, McWilliam, Hamish, Squizzato, Silvano, Park, Young Mi, Buso, Nicola, Lopez, Rodrigo

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Analysis Tool Web Services from the EMBL-EBI von McWilliam, Hamish, Li, Weizhong, Uludag, Mahmut, Squizzato, Silvano, Park, Young Mi, Buso, Nicola, Cowley, Andrew Peter, Lopez, Rodrigo

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Numerical simulation of laser-produced plasma expansion on a droplet surface von Zhao, Zhenyu, Li, Weizhong

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Artificial and natural duplicates in pyrosequencing reads of metagenomic data von Niu, Beifang, Fu, Limin, Sun, Shulei, Li, Weizhong

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Deep Learning and Its Applications in Biomedicine von Cao, Chensi, Liu, Feng, Tan, Hai, Song, Deshou, Shu, Wenjie, Li, Weizhong, Zhou, Yiming, Bo, Xiaochen, Xie, Zhi

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Interplay between the human gut microbiome and host metabolism von Visconti, Alessia, Le Roy, Caroline I., Rosa, Fabio, Rossi, Niccolò, Martin, Tiphaine C., Mohney, Robert P., Li, Weizhong, de Rinaldis, Emanuele, Bell, Jordana T., Venter, J. Craig, Nelson, Karen E., Spector, Tim D., Falchi, Mario

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InterProScan 5: genome-scale protein function classification von Jones, Philip, Binns, David, Chang, Hsin-Yu, Fraser, Matthew, Li, Weizhong, McAnulla, Craig, McWilliam, Hamish, Maslen, John, Mitchell, Alex, Nuka, Gift, Pesseat, Sebastien, Quinn, Antony F., Sangrador-Vegas, Amaia, Scheremetjew, Maxim, Yong, Siew-Yit, Lopez, Rodrigo, Hunter, Sarah

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Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease von Loomba, Rohit, Seguritan, Victor, Li, Weizhong, Long, Tao, Klitgord, Niels, Bhatt, Archana, Dulai, Parambir Singh, Caussy, Cyrielle, Bettencourt, Richele, Highlander, Sarah K., Jones, Marcus B., Sirlin, Claude B., Schnabl, Bernd, Brinkac, Lauren, Schork, Nicholas, Chen, Chi-Hua, Brenner, David A., Biggs, William, Yooseph, Shibu, Venter, J. Craig, Nelson, Karen E.

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Numerical study of continuous liquid tin jet breakup and satellite droplet formation von Zhao, Zhenyu, Li, Weizhong

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Identification of ribosomal RNA genes in metagenomic fragments von Huang, Ying, Gilna, Paul, Li, Weizhong

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Deep learning-based six-type classifier for lung cancer and mimics from histopathological whole slide images: a retrospective study von Yang, Huan, Chen, Lili, Cheng, Zhiqiang, Yang, Minglei, Wang, Jianbo, Lin, Chenghao, Wang, Yuefeng, Huang, Leilei, Chen, Yangshan, Peng, Sui, Ke, Zunfu, Li, Weizhong

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Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega von Sievers, Fabian, Wilm, Andreas, Dineen, David, Gibson, Toby J, Karplus, Kevin, Li, Weizhong, Lopez, Rodrigo, McWilliam, Hamish, Remmert, Michael, Söding, Johannes, Thompson, Julie D, Higgins, Desmond G

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Spray characteristics of pressure-swirl nozzles at different nozzle diameters von Zhang, Tao, Dong, Bo, Chen, Xiaohong, Qiu, Zhonghua, Jiang, Rui, Li, Weizhong

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Impact of intrapartum and postnatal antibiotics on the gut microbiome and emergence of antimicrobial resistance in infants von Tapiainen, Terhi, Koivusaari, Pirjo, Brinkac, Lauren, Lorenzi, Hernan A., Salo, Jarmo, Renko, Marjo, Pruikkonen, Hannele, Pokka, Tytti, Li, Weizhong, Nelson, Karen, Pirttilä, Anna Maria, Tejesvi, Mysore V.

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Vertical Transmission of Gut Microbiome and Antimicrobial Resistance Genes in Infants Exposed to Antibiotics at Birth von Li, Weizhong, Tapiainen, Terhi, Brinkac, Lauren, Lorenzi, Hernan A, Moncera, Kelvin, Tejesvi, Mysore V, Salo, Jarmo, Nelson, Karen E

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