Function and regulation of chromatin insulators in dynamic genome organization von Chen, Dahong, Lei, Elissa P

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Widespread Rearrangement of 3D Chromatin Organization Underlies Polycomb-Mediated Stress-Induced Silencing von Li, Li, Lyu, Xiaowen, Hou, Chunhui, Takenaka, Naomi, Nguyen, Huy Q., Ong, Chin-Tong, Cubeñas-Potts, Caelin, Hu, Ming, Lei, Elissa P., Bosco, Giovanni, Qin, Zhaohui S., Corces, Victor G.

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DiffChIPL: a differential peak analysis method for high-throughput sequencing data with biological replicates based on limma von Chen, Yang, Chen, Shue, Lei, Elissa P

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Chromosome segregation during spermatogenesis occurs through a unique center-kinetic mechanism in holocentric moth species von Hockens, Clio, Lorenzi, Hernan, Wang, Tricia T, Lei, Elissa P, Rosin, Leah F

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Oligopaint DNA FISH reveals telomere-based meiotic pairing dynamics in the silkworm, Bombyx mori von Rosin, Leah F, Gil, Jose, Drinnenberg, Ines A, Lei, Elissa P

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Dosage compensation in Bombyx mori is achieved by partial repression of both Z chromosomes in males von Rosin, Leah F, Chen, Dahong, Chen, Yang, Lei, Elissa P

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Chromatin insulator mechanisms ensure accurate gene expression by controlling overall 3D genome organization von Bhattacharya, Mallika, Lyda, Savanna F, Lei, Elissa P

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HP1 recruitment in the absence of argonaute proteins in Drosophila von Moshkovich, Nellie, Lei, Elissa P

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3D genome organization von Silahtaroglu, Asli, Bridger, Joanna M., Lei, Elissa P.

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Transposable element landscapes in aging Drosophila von Yang, Nachen, Srivastav, Satyam P, Rahman, Reazur, Ma, Qicheng, Dayama, Gargi, Li, Sizheng, Chinen, Madoka, Lei, Elissa P, Rosbash, Michael, Lau, Nelson C

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Different enhancer classes in Drosophila bind distinct architectural proteins and mediate unique chromatin interactions and 3D architecture von Cubeñas-Potts, Caelin, Rowley, M Jordan, Lyu, Xiaowen, Li, Ge, Lei, Elissa P, Corces, Victor G

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M1BP cooperates with CP190 to activate transcription at TAD borders and promote chromatin insulator activity von Bag, Indira, Chen, Shue, Rosin, Leah F., Chen, Yang, Liu, Chen-Yu, Yu, Guo-Yun, Lei, Elissa P.

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NURF301 contributes to gypsy chromatin insulator-mediated nuclear organization von Chen, Shue, Rosin, Leah F, Pegoraro, Gianluca, Moshkovich, Nellie, Murphy, Patrick J, Yu, Guoyun, Lei, Elissa P

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The zinc-finger protein CLAMP promotes gypsy chromatin insulator function in Drosophila von Bag, Indira, Dale, Ryan K, Palmer, Cameron, Lei, Elissa P

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Temporal inhibition of chromatin looping and enhancer accessibility during neuronal remodeling von Chen, Dahong, McManus, Catherine E., Radmanesh, Behram, Matzat, Leah H., Lei, Elissa P.

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A compendium of RNA-binding motifs for decoding gene regulation von Ray, Debashish, Kazan, Hilal, Cook, Kate B., Weirauch, Matthew T., Najafabadi, Hamed S., Li, Xiao, Gueroussov, Serge, Albu, Mihai, Zheng, Hong, Yang, Ally, Na, Hong, Irimia, Manuel, Matzat, Leah H., Dale, Ryan K., Smith, Sarah A., Yarosh, Christopher A., Kelly, Seth M., Nabet, Behnam, Mecenas, Desirea, Li, Weimin, Laishram, Rakesh S., Qiao, Mei, Lipshitz, Howard D., Piano, Fabio, Corbett, Anita H., Carstens, Russ P., Frey, Brendan J., Anderson, Richard A., Lynch, Kristen W., Penalva, Luiz O. F., Lei, Elissa P., Fraser, Andrew G., Blencowe, Benjamin J., Morris, Quaid D., Hughes, Timothy R.

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Drosophila Argonaute2 turnover is regulated by the ubiquitin proteasome pathway von Chinen, Madoka, Lei, Elissa P.

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Tissue-specific regulation of chromatin insulator function von Matzat, Leah H, Dale, Ryan K, Moshkovich, Nellie, Lei, Elissa P

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Shep regulates Drosophila neuronal remodeling by controlling transcription of its chromatin targets von Chen, Dahong, Dale, Ryan K, Lei, Elissa P

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Argonaute2 and LaminB modulate gene expression by controlling chromatin topology von Nazer, Ezequiel, Dale, Ryan K, Chinen, Madoka, Radmanesh, Behram, Lei, Elissa P

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