Double-edged sword: The evolutionary consequences of the epigenetic silencing of transposable elements von Choi, Jae Young, Lee, Yuh Chwen G.

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Pervasive epigenetic effects of Drosophila euchromatic transposable elements impact their evolution von Lee, Yuh Chwen G, Karpen, Gary H

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The Role of piRNA-Mediated Epigenetic Silencing in the Population Dynamics of Transposable Elements in Drosophila melanogaster von Lee, Yuh Chwen G

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Synergistic epistasis of the deleterious effects of transposable elements von Lee, Yuh Chwen G

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Species-specific chromatin landscape determines how transposable elements shape genome evolution von Huang, Yuheng, Shukla, Harsh, Lee, Yuh Chwen G

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Phylogenomic analysis reveals dynamic evolutionary history of the Drosophila heterochromatin protein 1 (HP1) gene family von Levine, Mia T, McCoy, Connor, Vermaak, Danielle, Lee, Yuh Chwen G, Hiatt, Mary Alice, Matsen, Frederick A, Malik, Harmit S

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Pericentromeric heterochromatin is hierarchically organized and spatially contacts H3K9me2 islands in euchromatin von Lee, Yuh Chwen G., Ogiyama, Yuki, Martins, Nuno M. C., Beliveau, Brian J., Acevedo, David, Wu, C. -ting, Cavalli, Giacomo, Karpen, Gary H.

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RNA from a simple-tandem repeat is required for sperm maturation and male fertility in Drosophila melanogaster von Mills, Wilbur Kyle, Lee, Yuh Chwen G, Kochendoerfer, Antje M, Dunleavy, Elaine M, Karpen, Gary H

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Prevalent Fast Evolution of Genes Involved in Heterochromatin Functions von Lin, Leila, Huang, Yuheng, McIntyre, Jennifer, Chang, Ching-Ho, Colmenares, Serafin, Lee, Yuh Chwen G

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Recurrent Innovation at Genes Required for Telomere Integrity in Drosophila von Lee, Yuh Chwen G, Leek, Courtney, Levine, Mia T

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Deep Conservation and Unexpected Evolutionary History of Neighboring lncRNAs MALAT1 and NEAT1 von Weghorst, Forrest, Torres Marcén, Martí, Faridi, Garrison, Lee, Yuh Chwen G., Cramer, Karina S.

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Causes and Consequences of Varying Transposable Element Activity: An Evolutionary Perspective von Betancourt, Andrea J, Wei, Kevin H.-C, Huang, Yuheng, Lee, Yuh Chwen G

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Genomic variation in natural populations of Drosophila melanogaster von Langley, Charles H, Stevens, Kristian, Cardeno, Charis, Lee, Yuh Chwen G, Schrider, Daniel R, Pool, John E, Langley, Sasha A, Suarez, Charlyn, Corbett-Detig, Russell B, Kolaczkowski, Bryan, Fang, Shu, Nista, Phillip M, Holloway, Alisha K, Kern, Andrew D, Dewey, Colin N, Song, Yun S, Hahn, Matthew W, Begun, David J

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Rapid Evolution of Gained Essential Developmental Functions of a Young Gene via Interactions with Other Essential Genes von Lee, Yuh Chwen G, Ventura, Iuri M, Rice, Gavin R, Chen, Dong-Yuan, Colmenares, Serafin U, Long, Manyuan

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Germline Genome Protection on an Evolutionary Treadmill von Lee, Yuh Chwen G., Levine, Mia T.

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Long-term and short-term evolutionary impacts of transposable elements on Drosophila von Lee, Yuh Chwen G, Langley, Charles H

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The ability of Drosophila hybrids to locate food declines with parental divergence von Turissini, David A., Comeault, Aaron A., Liu, Geoffrey, Lee, Yuh Chwen G., Matute, Daniel R.

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Transposable elements in natural populations of Drosophila melanogaster von Lee, Yuh Chwen G., Langley, Charles H.

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Differential strengths of positive selection revealed by hitchhiking effects at small physical scales in Drosophila melanogaster von Lee, Yuh Chwen G, Langley, Charles H, Begun, David J

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Genetic Architecture of Natural Variation Underlying Adult Foraging Behavior That Is Essential for Survival of Drosophila melanogaster von Lee, Yuh Chwen G, Yang, Qian, Chi, Wanhao, Turkson, Susie A, Du, Wei A, Kemkemer, Claus, Zeng, Zhao-Bang, Long, Manyuan, Zhuang, Xiaoxi

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