GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies von GOGARTEN, Stephanie M, BHANGALE, Tushar, NELSON, Sarah C, RICE, Kenneth, SHEN, Jess, SWARNKAR, Rohit, WEIR, Bruce S, LAURIE, Cathy C, CONOMOS, Matthew P, LAURIE, Cecelia A, MCHUGH, Caitlin P, PAINTER, Ian, XIUWEN ZHENG, CROSSLIN, David R, LEVINE, David, LUMLEY, Thomas

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Premature Menopause, Clonal Hematopoiesis, and Coronary Artery Disease in Postmenopausal Women von Honigberg, Michael C, Zekavat, Seyedeh M, Niroula, Abhishek, Griffin, Gabriel K, Bick, Alexander G, Pirruccello, James P, Nakao, Tetsushi, Whitsel, Eric A, Farland, Leslie V, Laurie, Cecelia, Kooperberg, Charles, Manson, JoAnn E, Gabriel, Stacey, Libby, Peter, Reiner, Alexander P, Ebert, Benjamin L, Natarajan, Pradeep

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Genetic Diversity and Association Studies in US Hispanic/Latino Populations: Applications in the Hispanic Community Health Study/Study of Latinos von Conomos, Matthew P., Laurie, Cecelia A., Stilp, Adrienne M., Gogarten, Stephanie M., McHugh, Caitlin P., Nelson, Sarah C., Sofer, Tamar, Fernández-Rhodes, Lindsay, Justice, Anne E., Graff, Mariaelisa, Young, Kristin L., Seyerle, Amanda A., Avery, Christy L., Taylor, Kent D., Rotter, Jerome I., Talavera, Gregory A., Daviglus, Martha L., Wassertheil-Smoller, Sylvia, Schneiderman, Neil, Heiss, Gerardo, Kaplan, Robert C., Franceschini, Nora, Reiner, Alex P., Shaffer, John R., Barr, R. Graham, Kerr, Kathleen F., Browning, Sharon R., Browning, Brian L., Weir, Bruce S., Avilés-Santa, M. Larissa, Papanicolaou, George J., Lumley, Thomas, Szpiro, Adam A., North, Kari E., Rice, Ken, Thornton, Timothy A., Laurie, Cathy C.

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A multi-ethnic genome-wide association study identifies novel loci for non-syndromic cleft lip with or without cleft palate on 2p24.2, 17q23 and 19q13 von Leslie, Elizabeth J, Carlson, Jenna C, Shaffer, John R, Feingold, Eleanor, Wehby, George, Laurie, Cecelia A, Jain, Deepti, Laurie, Cathy C, Doheny, Kimberly F, McHenry, Toby, Resick, Judith, Sanchez, Carla, Jacobs, Jennifer, Emanuele, Beth, Vieira, Alexandre R, Neiswanger, Katherine, Lidral, Andrew C, Valencia-Ramirez, Luz Consuelo, Lopez-Palacio, Ana Maria, Valencia, Dora Rivera, Arcos-Burgos, Mauricio, Czeizel, Andrew E, Field, L Leigh, Padilla, Carmencita D, Cutiongco-de la Paz, Eva Maria C, Deleyiannis, Frederic, Christensen, Kaare, Munger, Ronald G, Lie, Rolv T, Wilcox, Allen, Romitti, Paul A, Castilla, Eduardo E, Mereb, Juan C, Poletta, Fernando A, Orioli, Iêda M, Carvalho, Flavia M, Hecht, Jacqueline T, Blanton, Susan H, Buxó, Carmen J, Butali, Azeez, Mossey, Peter A, Adeyemo, Wasiu L, James, Olutayo, Braimah, Ramat O, Aregbesola, Babatunde S, Eshete, Mekonen A, Abate, Fikre, Koruyucu, Mine, Seymen, Figen, Ma, Lian, de Salamanca, Javier Enríquez, Weinberg, Seth M, Moreno, Lina, Murray, Jeffrey C, Marazita, Mary L

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Genome-wide Association Study of Platelet Count Identifies Ancestry-Specific Loci in Hispanic/Latino Americans von Schick, Ursula M., Jain, Deepti, Hodonsky, Chani J., Morrison, Jean V., Davis, James P., Brown, Lisa, Sofer, Tamar, Conomos, Matthew P., Schurmann, Claudia, McHugh, Caitlin P., Nelson, Sarah C., Vadlamudi, Swarooparani, Stilp, Adrienne, Plantinga, Anna, Baier, Leslie, Bien, Stephanie A., Gogarten, Stephanie M., Laurie, Cecelia A., Taylor, Kent D., Liu, Yongmei, Auer, Paul L., Franceschini, Nora, Szpiro, Adam, Rice, Ken, Kerr, Kathleen F., Rotter, Jerome I., Hanson, Robert L., Papanicolaou, George, Rich, Stephen S., Loos, Ruth J.F., Browning, Brian L., Browning, Sharon R., Weir, Bruce S., Laurie, Cathy C., Mohlke, Karen L., North, Kari E., Thornton, Timothy A., Reiner, Alex P.

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Genome-wide association study of dental caries in the Hispanic Communities Health Study/Study of Latinos (HCHS/SOL) von Morrison, Jean, Laurie, Cathy C, Marazita, Mary L, Sanders, Anne E, Offenbacher, Steven, Salazar, Christian R, Conomos, Matthew P, Thornton, Timothy, Jain, Deepti, Laurie, Cecelia A, Kerr, Kathleen F, Papanicolaou, George, Taylor, Kent, Kaste, Linda M, Beck, James D, Shaffer, John R

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A Genome-wide Association Study of Nonsyndromic Cleft Palate Identifies an Etiologic Missense Variant in GRHL3 von Leslie, Elizabeth J., Liu, Huan, Carlson, Jenna C., Shaffer, John R., Feingold, Eleanor, Wehby, George, Laurie, Cecelia A., Jain, Deepti, Laurie, Cathy C., Doheny, Kimberly F., McHenry, Toby, Resick, Judith, Sanchez, Carla, Jacobs, Jennifer, Emanuele, Beth, Vieira, Alexandre R., Neiswanger, Katherine, Standley, Jennifer, Czeizel, Andrew E., Deleyiannis, Frederic, Christensen, Kaare, Munger, Ronald G., Lie, Rolv T., Wilcox, Allen, Romitti, Paul A., Field, L. Leigh, Padilla, Carmencita D., Cutiongco-de la Paz, Eva Maria C., Lidral, Andrew C., Valencia-Ramirez, Luz Consuelo, Lopez-Palacio, Ana Maria, Valencia, Dora Rivera, Arcos-Burgos, Mauricio, Castilla, Eduardo E., Mereb, Juan C., Poletta, Fernando A., Orioli, Iêda M., Carvalho, Flavia M., Hecht, Jacqueline T., Blanton, Susan H., Buxó, Carmen J., Butali, Azeez, Mossey, Peter A., Adeyemo, Wasiu L., James, Olutayo, Braimah, Ramat O., Aregbesola, Babatunde S., Eshete, Mekonen A., Deribew, Milliard, Koruyucu, Mine, Seymen, Figen, Ma, Lian, de Salamanca, Javier Enríquez, Weinberg, Seth M., Moreno, Lina, Cornell, Robert A., Murray, Jeffrey C., Marazita, Mary L.

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A fully adjusted two‐stage procedure for rank‐normalization in genetic association studies von Sofer, Tamar, Zheng, Xiuwen, Gogarten, Stephanie M., Laurie, Cecelia A., Grinde, Kelsey, Shaffer, John R., Shungin, Dmitry, O’Connell, Jeffrey R., Durazo‐Arvizo, Ramon A., Raffield, Laura, Lange, Leslie, Musani, Solomon, Vasan, Ramachandran S., Cupples, L. Adrienne, Reiner, Alexander P., Laurie, Cathy C., Rice, Kenneth M.

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Polygenic transcriptome risk scores for COPD and lung function improve cross-ethnic portability of prediction in the NHLBI TOPMed program von Hu, Xiaowei, Qiao, Dandi, Kim, Wonji, Moll, Matthew, Balte, Pallavi P, Lange, Leslie A, Bartz, Traci M, Kumar, Rajesh, Li, Xingnan, Yu, Bing, Cade, Brian E, Laurie, Cecelia A, Sofer, Tamar, Ruczinski, Ingo, Nickerson, Deborah A, Muzny, Donna M, Metcalf, Ginger A, Doddapaneni, Harshavardhan, Gabriel, Stacy, Gupta, Namrata, Dugan-Perez, Shannon, Cupples, L Adrienne, Loehr, Laura R, Jain, Deepti, Rotter, Jerome I, Wilson, James G, Psaty, Bruce M, Fornage, Myriam, Morrison, Alanna C, Vasan, Ramachandran S, Washko, George, Rich, Stephen S, O'Connor, George T, Bleecker, Eugene, Kaplan, Robert C, Kalhan, Ravi, Redline, Susan, Gharib, Sina A, Meyers, Deborah, Ortega, Victor, Dupuis, Josée, London, Stephanie J, Lappalainen, Tuuli, Oelsner, Elizabeth C, Silverman, Edwin K, Barr, R Graham, Thornton, Timothy A, Wheeler, Heather E, Cho, Michael H, Im, Hae Kyung, Manichaikul, Ani

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Genome-Wide Association Study Reveals Multiple Loci Influencing Normal Human Facial Morphology von Shaffer, John R, Orlova, Ekaterina, Lee, Myoung Keun, Leslie, Elizabeth J, Raffensperger, Zachary D, Heike, Carrie L, Cunningham, Michael L, Hecht, Jacqueline T, Kau, Chung How, Nidey, Nichole L, Moreno, Lina M, Wehby, George L, Murray, Jeffrey C, Laurie, Cecelia A, Laurie, Cathy C, Cole, Joanne, Ferrara, Tracey, Santorico, Stephanie, Klein, Ophir, Mio, Washington, Feingold, Eleanor, Hallgrimsson, Benedikt, Spritz, Richard A, Marazita, Mary L, Weinberg, Seth M

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Genome-wide association of white blood cell counts in Hispanic/Latino Americans: the Hispanic Community Health Study/Study of Latinos von Jain, Deepti, Hodonsky, Chani J, Schick, Ursula M, Morrison, Jean V, Minnerath, Sharon, Brown, Lisa, Schurmann, Claudia, Liu, Yongmei, Auer, Paul L, Laurie, Cecelia A, Taylor, Kent D, Browning, Brian L, Papanicolaou, George, Browning, Sharon R, Loos, Ruth J F, North, Kari E, Thyagarajan, Bharat, Laurie, Cathy C, Thornton, Timothy A, Sofer, Tamar, Reiner, Alexander P

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Whole Genome Analysis of Venous Thromboembolism: the Trans-Omics for Precision Medicine Program von Seyerle, Amanda A., Laurie, Cecelia A., Coombes, Brandon J., Jain, Deepti, Conomos, Matthew P., Brody, Jennifer, Chen, Ming-Huei, Gogarten, Stephanie M., Beutel, Kathleen M., Gupta, Namrata, Heckbert, Susan R., Jackson, Rebecca D., Johnson, Andrew D., Ko, Darae, Manson, JoAnn E., McKnight, Barbara, Metcalf, Ginger A., Morrison, Alanna C., Reiner, Alexander P., Sofer, Tamar, Tang, Weihong, Wiggins, Kerri L., Boerwinkle, Eric, de Andrade, Mariza, Gabriel, Stacey B., Gibbs, Richard A., Laurie, Cathy C., Psaty, Bruce M., Vasan, Ramachandran S., Rice, Ken, Kooperberg, Charles, Pankow, James S., Smith, Nicholas L., Pankratz, Nathan

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Identification of Genetic Susceptibility Loci for Colorectal Tumors in a Genome-Wide Meta-analysis von Peters, Ulrike, Jiao, Shuo, Schumacher, Fredrick R, Hutter, Carolyn M, Aragaki, Aaron K, Baron, John A, Berndt, Sonja I, Bézieau, Stéphane, Brenner, Hermann, Butterbach, Katja, Caan, Bette J, Campbell, Peter T, Carlson, Christopher S, Casey, Graham, Chan, Andrew T, Chang–Claude, Jenny, Chanock, Stephen J, Chen, Lin S, Coetzee, Gerhard A, Coetzee, Simon G, Conti, David V, Curtis, Keith R, Duggan, David, Edwards, Todd, Fuchs, Charles S, Gallinger, Steven, Giovannucci, Edward L, Gogarten, Stephanie M, Gruber, Stephen B, Haile, Robert W, Harrison, Tabitha A, Hayes, Richard B, Henderson, Brian E, Hoffmeister, Michael, Hopper, John L, Hudson, Thomas J, Hunter, David J, Jackson, Rebecca D, Jee, Sun Ha, Jenkins, Mark A, Jia, Wei–Hua, Kolonel, Laurence N, Kooperberg, Charles, Küry, Sébastien, LaCroix, Andrea Z, Laurie, Cathy C, Laurie, Cecelia A, Le Marchand, Loic, Lemire, Mathieu, Levine, David, Lindor, Noralane M, Liu, Yan, Ma, Jing, Makar, Karen W, Matsuo, Keitaro, Newcomb, Polly A, Potter, John D, Prentice, Ross L, Qu, Conghui, Rohan, Thomas, Rosse, Stephanie A, Schoen, Robert E, Seminara, Daniela, Shrubsole, Martha, Shu, Xiao–Ou, Slattery, Martha L, Taverna, Darin, Thibodeau, Stephen N, Ulrich, Cornelia M, White, Emily, Xiang, Yongbing, Zanke, Brent W, Zeng, Yi–Xin, Zhang, Ben, Zheng, Wei, Hsu, Li

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Imputation-Based Genomic Coverage Assessments of Current Human Genotyping Arrays von Nelson, Sarah C, Doheny, Kimberly F, Pugh, Elizabeth W, Romm, Jane M, Ling, Hua, Laurie, Cecelia A, Browning, Sharon R, Weir, Bruce S, Laurie, Cathy C

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Genetic analyses of diverse populations improves discovery for complex traits von Wojcik, Genevieve L., Graff, Mariaelisa, Nishimura, Katherine K., Tao, Ran, Haessler, Jeffrey, Gignoux, Christopher R., Highland, Heather M., Patel, Yesha M., Sorokin, Elena P., Avery, Christy L., Belbin, Gillian M., Bien, Stephanie A., Cheng, Iona, Cullina, Sinead, Hodonsky, Chani J., Hu, Yao, Huckins, Laura M., Jeff, Janina, Justice, Anne E., Kocarnik, Jonathan M., Lim, Unhee, Lin, Bridget M., Lu, Yingchang, Nelson, Sarah C., Park, Sung-Shim L., Poisner, Hannah, Preuss, Michael H., Richard, Melissa A., Schurmann, Claudia, Setiawan, Veronica W., Sockell, Alexandra, Vahi, Karan, Verbanck, Marie, Vishnu, Abhishek, Walker, Ryan W., Young, Kristin L., Zubair, Niha, Acuña-Alonso, Victor, Ambite, Jose Luis, Barnes, Kathleen C., Boerwinkle, Eric, Bottinger, Erwin P., Bustamante, Carlos D., Caberto, Christian, Canizales-Quinteros, Samuel, Conomos, Matthew P., Deelman, Ewa, Do, Ron, Doheny, Kimberly, Fernández-Rhodes, Lindsay, Fornage, Myriam, Hailu, Benyam, Heiss, Gerardo, Henn, Brenna M., Hindorff, Lucia A., Jackson, Rebecca D., Laurie, Cecelia A., Laurie, Cathy C., Li, Yuqing, Lin, Dan-Yu, Moreno-Estrada, Andres, Nadkarni, Girish, Norman, Paul J., Pooler, Loreall C., Reiner, Alexander P., Romm, Jane, Sabatti, Chiara, Sandoval, Karla, Sheng, Xin, Stahl, Eli A., Stram, Daniel O., Thornton, Timothy A., Wassel, Christina L., Wilkens, Lynne R., Winkler, Cheryl A., Yoneyama, Sachi, Buyske, Steven, Haiman, Christopher A., Kooperberg, Charles, Le Marchand, Loic, Loos, Ruth J. F., Matise, Tara C., North, Kari E., Peters, Ulrike, Kenny, Eimear E., Carlson, Christopher S.

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Identification of paternal uniparental disomy on chromosome 22 and a de novo deletion on chromosome 18 in individuals with orofacial clefts von Oseni, Ganiyu O., Jain, Deepti, Mossey, Peter A., Busch, Tamara D., Gowans, Lord J.J., Eshete, Mekonen A., Adeyemo, Wasiu L., Laurie, Cecelia A., Laurie, Cathy C., Owais, Arwa, Olaitan, Peter B., Aregbesola, Babatunde S., Oginni, Fadekemi O., Bello, Saidu A., Donkor, Peter, Audu, Rosemary, Onwuamah, Chika, Obiri‐Yeboah, Solomon, Plange‐Rhule, Gyikua, Ogunlewe, Olugbenga M., James, Olutayo, Halilu, Taiye, Abate, Firke, Abdur‐Rahman, Lukman O., Oladugba, Abimbola V., Marazita, Mary L., Murray, Jeffrey C., Adeyemo, Adebowale A., Butali, Azeez

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Acquired chromosomal anomalies in chronic lymphocytic leukemia patients compared with more than 50,000 quasi-normal participants von Laurie, Cathy C, Laurie, Cecelia A, Smoley, Stephanie A, Carlson, Erin E, Flinn, Ian, Fridley, Brooke L, Greisman, Harvey A, Gribben, John G, Jelinek, Diane F, Nelson, Sarah C, Paietta, Elisabeth, Schaid, Dan, Sun, Zhuoxin, Tallman, Martin S, Weinshilboum, Richard, Kay, Neil E, Shanafelt, Tait D

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Association Between Titin Loss-of-Function Variants and Early-Onset Atrial Fibrillation von Choi, Seung Hoan, Weng, Lu-Chen, Roselli, Carolina, Lin, Honghuang, Haggerty, Christopher M, Shoemaker, M. Benjamin, Barnard, John, Arking, Dan E, Chasman, Daniel I, Albert, Christine M, Chaffin, Mark, Tucker, Nathan R, Smith, Jonathan D, Gupta, Namrata, Gabriel, Stacey, Margolin, Lauren, Shea, Marisa A, Shaffer, Christian M, Yoneda, Zachary T, Boerwinkle, Eric, Smith, Nicholas L, Silverman, Edwin K, Redline, Susan, Vasan, Ramachandran S, Burchard, Esteban G, Gogarten, Stephanie M, Laurie, Cecelia, Blackwell, Thomas W, Abecasis, Gonçalo, Carey, David J, Fornwalt, Brandon K, Smelser, Diane T, Baras, Aris, Dewey, Frederick E, Jaquish, Cashell E, Papanicolaou, George J, Sotoodehnia, Nona, Van Wagoner, David R, Psaty, Bruce M, Kathiresan, Sekar, Darbar, Dawood, Alonso, Alvaro, Heckbert, Susan R, Chung, Mina K, Roden, Dan M, Benjamin, Emelia J, Murray, Michael F, Lunetta, Kathryn L, Lubitz, Steven A, Ellinor, Patrick T

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BinomiRare: A robust test for association of a rare genetic variant with a binary outcome for mixed models and any case-control proportion von Sofer, Tamar, Lee, Jiwon, Kurniansyah, Nuzulul, Jain, Deepti, Laurie, Cecelia A., Gogarten, Stephanie M., Conomos, Matthew P., Heavner, Ben, Hu, Yao, Kooperberg, Charles, Haessler, Jeffrey, Vasan, Ramachandran S., Cupples, L. Adrienne, Coombes, Brandon J., Seyerle, Amanda, Gharib, Sina A., Chen, Han, O’Connell, Jeffrey R., Zhang, Man, Gottlieb, Daniel J., Psaty, Bruce M., Longstreth, W.T., Rotter, Jerome I., Taylor, Kent D., Rich, Stephen S., Guo, Xiuqing, Boerwinkle, Eric, Morrison, Alanna C., Pankow, James S., Johnson, Andrew D., Pankratz, Nathan, Reiner, Alex P., Redline, Susan, Smith, Nicholas L., Rice, Kenneth M., Schifano, Elizabeth D.

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Loci associated with ischaemic stroke and its subtypes (SiGN): a genome-wide association study von McArdle, Patrick F, Malik, Rainer, Algra, Ale, Amouyel, Philippe, Anderson, Christopher D, Arsava, Ethem Murat, Ay, Hakan, Blanton, Susan H, Brown, Robert D, Burgess, Annette I, Chasman, Daniel I, Chen, Wei-Min, Cheng, Yu-Ching, Cotlarciuc, Ioana, Cruchaga, Carlos, Dave, Tushar, Dawson, Jesse, Delavaran, Hossein, Dell, Cameron A, Dichgans, Martin, Doheny, Kimberly F, Dong, Chuanhui, Duggan, David J, Fornage, Myriam, Frossard, Philippe M, Gamble, Dale M, Giralt-Steinhauer, Eva, Grewal, Raji P, Han, Buhm, Hankey, Graeme J, Heitsch, Laura, Higgins, Peter, Hopewell, Jemma C, Horenstein, Richard B, Howard, George, Ingelsson, Erik, Jackson, Rebecca D, Jern, Christina, Jood, Katarina, Kahn, Muhammad S, Kappelle, L Jaap, Kardia, Sharon L R, Keene, Keith L, Kissela, Brett M, Labovitz, Daniel, Lee, Cue Hyunkyu, Lee, Jin-Moo, Lehm, Manuel, Levi, Christopher, Leys, Didier, Maguire, Jane, Manichaikul, Ani, McClure, Leslie A, Mola-Caminal, Marina, Montaner, Joan, Müller-Nurasyid, Martina, Nalls, Mike A, O'Connell, Jeffrey R, O'Donnell, Martin, Papanicolaou, George J, Paré, Guillaume, Pera, Joanna, Peters, Annette, Rabionet, Raquel, Raffeld, Miriam R, Rannikmäe, Kristiina, Rasheed, Asif, Rexrode, Kathryn, Rolfs, Arndt, Rose, Lynda M, Sacco, Ralph L, Schmidt, Reinhold, Schürks, Markus, Segal, Helen C, Seiler, Stephan, Shuldiner, Alan R, Silver, Brian, Slowik, Agnieszka, Smith, Jennifer A, Söderholm, Martin, Sparks, Mary J, Sudlow, Cathie LM, Tajuddin, Salman M, Talbert, Robert L, Tatlisumak, Turgut, Thorsteindottir, Unnur, Tiedt, Steffen, Trompet, Stella, Waldenberger, Melanie, Wang, Liyong, Wassertheil-Smoller, Sylvia, Weir, David R, Wiggins, Kerri L, Wloch-Kopec, Dorota, Woodfield, Rebecca, Xu, Huichun, Zonderman, Alan B, Worrall, Bradford B, Kittner, Steven J, Arnett, Donna K Arnett

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