Improved detection of colibactin-induced mutations by genotoxic E. coli in organoids and colorectal cancer von Rosendahl Huber, Axel, Pleguezuelos-Manzano, Cayetano, Puschhof, Jens, Ubels, Joske, Boot, Charelle, Saftien, Aurelia, Verheul, Mark, Trabut, Laurianne T., Groenen, Niels, van Roosmalen, Markus, Ouyang, Kyanna S., Wood, Henry, Quirke, Phil, Meijer, Gerrit, Cuppen, Edwin, Clevers, Hans, van Boxtel, Ruben

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Selective pressures of platinum compounds shape the evolution of therapy-related myeloid neoplasms von Bertrums, Eline J. M., de Kanter, Jurrian K., Derks, Lucca L. M., Verheul, Mark, Trabut, Laurianne, van Roosmalen, Markus J., Hasle, Henrik, Antoniou, Evangelia, Reinhardt, Dirk, Dworzak, Michael N., Mühlegger, Nora, van den Heuvel-Eibrink, Marry M., Zwaan, C. Michel, Goemans, Bianca F., van Boxtel, Ruben

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Protocol for genome-wide analysis of somatic variants at single-cell resolution using primary template-directed DNA amplification von Derks, Lucca L.M., van Leeuwen, Anaïs J.C.N., Steemers, Alexander S., Trabut, Laurianne, van Roosmalen, Markus J., Poort, Vera M., Hagelaar, Rico, Verheul, Mark, Middelkamp, Sjors, van Boxtel, Ruben

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Single‐cell RNA sequencing of pediatric Hodgkin lymphoma to study the inhibition of T cell subtypes von Kanter, Jurrian K., Steemers, Alexander S., Gonzalez, Daniel Montiel, Ineveld, Ravian L., Blijleven, Catharina, Groenen, Niels, Trabut, Laurianne, Scheijde‐Vermeulen, Marijn A., Westera, Liset, Beishuizen, Auke, Rios, Anne C., Holstege, Frank C. P., Brandsma, Arianne M., Margaritis, Thanasis, Boxtel, Ruben, Meyer‐Wentrup, Friederike

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Single-Cell Whole-Genome Sequencing after Chemotherapeutic Treatment Reveals Cell Type-Specific Mutational Burdens von Derks, Lucca L.M., Van Der Werf, Inge, Trabut, Laurianne, Bertrums, Eline, De Kanter, Jurrian, Rosendahl Huber, Axel, Van Boxtel, Ruben

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Transient Differentiation-State Plasticity Occurs during Acute Lymphoblastic Leukemia Initiation von Poort, Vera M, Hagelaar, Rico, van Roosmalen, Markus J, Trabut, Laurianne, Buijs-Gladdines, Jessica G.C.A.M, van Wijk, Bram, Meijerink, Jules, van Boxtel, Ruben

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Transient Differentiation-State Plasticity during Initiation of Pediatric Acute Lymphoblastic Leukemia von Poort, Vera M, Hagelaar, Rico, Roosmalen, Mark van, Trabut, Laurianne, Buijs-Gladdines, Jessica G.C.A.M., Montiel González, Diego, van Wijk, Bram, Meijerink, Jules P.P., Van Boxtel, Ruben

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Single-Cell Multi-Omics to Infer Hierarchical Ancestry and Organization of Subclones in Acute Lymphoblastic Leukemia von Poort, Vera M, Hagelaar, Rico, Montiel González, Diego, Buijs-Gladdines, Jessica G.C.A.M., Trabut, Laurianne, van Wijk, Bram, Meijerink, Jules PP, Van Boxtel, Ruben

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Improved detection of colibactin-induced mutations by genotoxic E. coli in organoids and colorectal cancer von Rosendahl Huber, Axel, Pleguezuelos-Manzano, Cayetano, Puschhof, Jens, Ubels, Joske, Boot, Charelle, Saftien, Aurelia, Verheul, Mark, Trabut, Laurianne T, Groenen, Niels, van Roosmalen, Markus, Ouyang, Kyanna S, Wood, Henry, Quirke, Phil, Meijer, Gerrit, Cuppen, Edwin, Clevers, Hans, van Boxtel, Ruben

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Comprehensive single-cell genome analysis at nucleotide resolution using the PTA Analysis Toolbox von Middelkamp, Sjors, Manders, Freek, Peci, Flavia, van Roosmalen, Markus J, González, Diego Montiel, Bertrums, Eline J.M, van der Werf, Inge, Derks, Lucca L.M, Groenen, Niels M, Verheul, Mark, Trabut, Laurianne, Pleguezuelos-Manzano, Cayetano, Brandsma, Arianne M, Antoniou, Evangelia, Reinhardt, Dirk, Bierings, Marc, Belderbos, Mirjam E, van Boxtel, Ruben

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Comprehensive single-cell genome analysis at nucleotide resolution using the PTA Analysis Toolbox von Middelkamp, Sjors, Manders, Freek, Peci, Flavia, van Roosmalen, Markus J., González, Diego Montiel, Bertrums, Eline J.M., van der Werf, Inge, Derks, Lucca L.M., Groenen, Niels M., Verheul, Mark, Trabut, Laurianne, Pleguezuelos-Manzano, Cayetano, Brandsma, Arianne M., Antoniou, Evangelia, Reinhardt, Dirk, Bierings, Marc, Belderbos, Mirjam E., van Boxtel, Ruben

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