ECNet is an evolutionary context-integrated deep learning framework for protein engineering von Luo, Yunan, Jiang, Guangde, Yu, Tianhao, Liu, Yang, Vo, Lam, Ding, Hantian, Su, Yufeng, Qian, Wesley Wei, Zhao, Huimin, Peng, Jian

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When causal inference meets deep learning von Luo, Yunan, Peng, Jian, Ma, Jianzhu

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Deep geometric representations for modeling effects of mutations on protein-protein binding affinity von Liu, Xianggen, Luo, Yunan, Li, Pengyong, Song, Sen, Peng, Jian

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A network integration approach for drug-target interaction prediction and computational drug repositioning from heterogeneous information von Luo, Yunan, Zhao, Xinbin, Zhou, Jingtian, Yang, Jinglin, Zhang, Yanqing, Kuang, Wenhua, Peng, Jian, Chen, Ligong, Zeng, Jianyang

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Integrating thermodynamic and sequence contexts improves protein-RNA binding prediction von Su, Yufeng, Luo, Yunan, Zhao, Xiaoming, Liu, Yang, Peng, Jian

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Machine learning-guided co-optimization of fitness and diversity facilitates combinatorial library design in enzyme engineering von Ding, Kerr, Chin, Michael, Zhao, Yunlong, Huang, Wei, Mai, Binh Khanh, Wang, Huanan, Liu, Peng, Yang, Yang, Luo, Yunan

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STAIR 2.0: A Generic and Automatic Algorithm to Fuse Modis, Landsat, and Sentinel-2 to Generate 10 m, Daily, and Cloud-/Gap-Free Surface Reflectance Product von Luo, Yunan, Guan, Kaiyu, Peng, Jian, Wang, Sibo, Huang, Yizhi

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Metabolic activity organizes olfactory representations von Qian, Wesley W, Wei, Jennifer N, Sanchez-Lengeling, Benjamin, Lee, Brian K, Luo, Yunan, Vlot, Marnix, Dechering, Koen, Peng, Jian, Gerkin, Richard C, Wiltschko, Alexander B

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An integrative drug repositioning framework discovered a potential therapeutic agent targeting COVID-19 von Ge, Yiyue, Tian, Tingzhong, Huang, Suling, Wan, Fangping, Li, Jingxin, Li, Shuya, Wang, Xiaoting, Yang, Hui, Hong, Lixiang, Wu, Nian, Yuan, Enming, Luo, Yunan, Cheng, Lili, Hu, Chengliang, Lei, Yipin, Shu, Hantao, Feng, Xiaolong, Jiang, Ziyuan, Wu, Yunfu, Chi, Ying, Guo, Xiling, Cui, Lunbiao, Xiao, Liang, Li, Zeng, Yang, Chunhao, Miao, Zehong, Chen, Ligong, Li, Haitao, Zeng, Hainian, Zhao, Dan, Zhu, Fengcai, Shen, Xiaokun, Zeng, Jianyang

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Next Decade's AI-Based Drug Development Features Tight Integration of Data and Computation von Luo, Yunan, Peng, Jian, Ma, Jianzhu

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BioDolphin as a comprehensive database of lipid–protein binding interactions von Yang, Li-Yen, Ping, Kaike, Luo, Yunan, McShan, Andrew C.

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Zn doping induced the enhancement of electrochemical performance for CoTiO3 anode material von Quan, Lijun, Li, Ying, Gu, Wenwen, Su, Ting, Luo, Yunan, Liu, Mengjiao, Lai, Xin, Bi, Jian, Gao, Daojiang, Zhao, Yan

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Sensing the shape of functional proteins with topology von Luo, Yunan

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Enzyme function prediction using contrastive learning von Yu, Tianhao, Cui, Haiyang, Li, Jianan Canal, Luo, Yunan, Jiang, Guangde, Zhao, Huimin

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STAIR: A generic and fully-automated method to fuse multiple sources of optical satellite data to generate a high-resolution, daily and cloud-/gap-free surface reflectance product von Luo, Yunan, Guan, Kaiyu, Peng, Jian

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Supervised biological network alignment with graph neural networks von Ding, Kerr, Wang, Sheng, Luo, Yunan

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Leveraging conformal prediction to annotate enzyme function space with limited false positives von Ding, Kerr, Luo, Jiaqi, Luo, Yunan

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scPretrain: multi-task self-supervised learning for cell-type classification von Zhang, Ruiyi, Luo, Yunan, Ma, Jianzhu, Zhang, Ming, Wang, Sheng

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Calibrated geometric deep learning improves kinase–drug binding predictions von Luo, Yunan, Liu, Yang, Peng, Jian

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Deriving high-spatiotemporal-resolution leaf area index for agroecosystems in the U.S. Corn Belt using Planet Labs CubeSat and STAIR fusion data von Kimm, Hyungsuk, Guan, Kaiyu, Jiang, Chongya, Peng, Bin, Gentry, Laura F., Wilkin, Scott C., Wang, Sibo, Cai, Yaping, Bernacchi, Carl J., Peng, Jian, Luo, Yunan

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