Investigating the Role of MicroRNA and Transcription Factor Co-regulatory Networks in Multiple Sclerosis Pathogenesis von Nuzziello, Nicoletta, Vilardo, Laura, Pelucchi, Paride, Consiglio, Arianna, Liuni, Sabino, Trojano, Maria, Liguori, Maria

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Combined microRNA and mRNA expression analysis in pediatric multiple sclerosis: an integrated approach to uncover novel pathogenic mechanisms of the disease von Liguori, Maria, Nuzziello, Nicoletta, Licciulli, Flavio, Consiglio, Arianna, Simone, Marta, Viterbo, Rosa Gemma, Creanza, Teresa Maria, Ancona, Nicola, Tortorella, Carla, Margari, Lucia, Grillo, Giorgio, Giordano, Paola, Liuni, Sabino, Trojano, Maria

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UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs von Grillo, Giorgio, Turi, Antonio, Licciulli, Flavio, Mignone, Flavio, Liuni, Sabino, Banfi, Sandro, Gennarino, Vincenzo Alessandro, Horner, David S, Pavesi, Giulio, Picardi, Ernesto, Pesole, Graziano

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Arena-Idb: a platform to build human non-coding RNA interaction networks von Bonnici, Vincenzo, Caro, Giorgio De, Constantino, Giorgio, Liuni, Sabino, D'Elia, Domenica, Bombieri, Nicola, Licciulli, Flavio, Giugno, Rosalba

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Transcriptional Profiling of ESTs from the Biocontrol Fungus Chaetomium cupreum von Zhang, Haiyan, Li, Min

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Plant miRNAs Reduce Cancer Cell Proliferation by Targeting MALAT1 and NEAT1: A Beneficial Cross-Kingdom Interaction von Marzano, Flaviana, Caratozzolo, Mariano Francesco, Consiglio, Arianna, Licciulli, Flavio, Liuni, Sabino, Sbisà, Elisabetta, D’Elia, Domenica, Tullo, Apollonia, Catalano, Domenico

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Integrated Analysis of microRNA and mRNA Expression Profiles: An Attempt to Disentangle the Complex Interaction Network in Attention Deficit Hyperactivity Disorder von Nuzziello, Nicoletta, Craig, Francesco, Simone, Marta, Consiglio, Arianna, Licciulli, Flavio, Margari, Lucia, Grillo, Giorgio, Liuni, Sabino, Liguori, Maria

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Structural and functional features of eukaryotic mRNA untranslated regions von Pesole, G, Mignone, F, Gissi, C, Grillo, G, Licciulli, F, Liuni, S

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Transmembrane Protein TMEM230, a Target of Glioblastoma Therapy von Cocola, Cinzia, Magnaghi, Valerio, Abeni, Edoardo, Pelucchi, Paride, Martino, Valentina, Vilardo, Laura, Piscitelli, Eleonora, Consiglio, Arianna, Grillo, Giorgio, Mosca, Ettore, Gualtierotti, Roberta, Mazzaccaro, Daniela, La Sala, Gina, Di Pietro, Chiara, Palizban, Mira, Liuni, Sabino, DePedro, Giuseppina, Morara, Stefano, Nano, Giovanni, Kehler, James, Greve, Burkhard, Noghero, Alessio, Marazziti, Daniela, Bussolino, Federico, Bellipanni, Gianfranco, D’Agnano, Igea, Götte, Martin, Zucchi, Ileana, Reinbold, Rolland

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Meta-Analysis of Differential Connectivity in Gene Co-Expression Networks in Multiple Sclerosis von Creanza, Teresa Maria, Liguori, Maria, Liuni, Sabino, Nuzziello, Nicoletta, Ancona, Nicola

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A Pilot Longitudinal Evaluation of MicroRNAs for Monitoring the Cognitive Impairment in Pediatric Multiple Sclerosis von Nuzziello, Nicoletta, Consiglio, Arianna, Viterbo, Rosa Gemma, Licciulli, Flavio, Liuni, Sabino, Trojano, Maria, Liguori, Maria

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p53FamTaG: a database resource of human p53, p63 and p73 direct target genes combining in silico prediction and microarray data von Sbisà, Elisabetta, Catalano, Domenico, Grillo, Giorgio, Licciulli, Flavio, Turi, Antonio, Liuni, Sabino, Pesole, Graziano, De Grassi, Anna, Caratozzolo, Mariano Francesco, D'Erchia, Anna Maria, Navarro, Beatriz, Tullo, Apollonia, Saccone, Cecilia, Gisel, Andreas

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Molecular Characterization of Peripheral Extracellular Vesicles in Clinically Isolated Syndrome: Preliminary Suggestions from a Pilot Study von Nuzziello, Nicoletta, Blonda, Maria, Licciulli, Flavio, Liuni, Sabino, Amoruso, Antonella, Valletti, Alessio, Consiglio, Arianna, Avolio, Carlo, Liguori, Maria

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BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments von Consiglio, Arianna, Carella, Massimo, De Caro, Giorgio, Delle Foglie, Gianfranco, Giovannelli, Candida, Grillo, Giorgio, Ianigro, Massimo, Licciulli, Flavio, Palumbo, Orazio, Piepoli, Ada, Ranieri, Elena, Liuni, Sabino

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Regularized Least Squares Cancer classifiers from DNA microarray data von Ancona, Nicola, Maglietta, Rosalia, D'Addabbo, Annarita, Liuni, Sabino, Pesole, Graziano

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Analysis of oligonucleotide AUG start codon context in eukariotic mRNAs von Pesole, G, Gissi, C, Grillo, G, Licciulli, F, Liuni, S, Saccone, C

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Structural and compositional features of untranslated regions of eukaryotic mRNAs von Pesole, Graziano, Liuni, Sabino, Grillo, Giorgio, Saccone, Cecilia

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A fuzzy method for RNA-Seq differential expression analysis in presence of multireads von Consiglio, Arianna, Mencar, Corrado, Grillo, Giorgio, Marzano, Flaviana, Caratozzolo, Mariano Francesco, Liuni, Sabino

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ITSoneDB: a comprehensive collection of eukaryotic ribosomal RNA Internal Transcribed Spacer 1 (ITS1) sequences von Santamaria, Monica, Fosso, Bruno, Licciulli, Flavio, Balech, Bachir, Larini, Ilaria, Grillo, Giorgio, De Caro, Giorgio, Liuni, Sabino, Pesole, Graziano

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TRIM8 restores p53 tumour suppressor function by blunting N-MYC activity in chemo-resistant tumours von Mastropasqua, Francesca, Marzano, Flaviana, Valletti, Alessio, Aiello, Italia, Di Tullio, Giuseppe, Morgano, Annalisa, Liuni, Sabino, Ranieri, Elena, Guerrini, Luisa, Gasparre, Giuseppe, Sbisà, Elisabetta, Pesole, Graziano, Moschetta, Antonio, Caratozzolo, Mariano Francesco, Tullo, Apollonia

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