Analytical and clinical validation of a microbial cell-free DNA sequencing test for infectious disease von Blauwkamp, Timothy A., Thair, Simone, Rosen, Michael J., Blair, Lily, Lindner, Martin S., Vilfan, Igor D., Kawli, Trupti, Christians, Fred C., Venkatasubrahmanyam, Shivkumar, Wall, Gregory D., Cheung, Anita, Rogers, Zoë N., Meshulam-Simon, Galit, Huijse, Liza, Balakrishnan, Sanjeev, Quinn, James V., Hollemon, Desiree, Hong, David K., Vaughn, Marla Lay, Kertesz, Mickey, Bercovici, Sivan, Wilber, Judith C., Yang, Samuel

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DUDes: a top-down taxonomic profiler for metagenomics von Piro, Vitor C, Lindner, Martin S, Renard, Bernhard Y

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Metagenomic profiling of known and unknown microbes with microbeGPS von Lindner, Martin S, Renard, Bernhard Y

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Next-generation sequencing of microbial cell-free DNA for rapid noninvasive diagnosis of infectious diseases in immunocompromised hosts [version 4; peer review: 3 approved] von Camargo, Jose F, Ahmed, Asim A, Lindner, Martin S, Morris, Michele I, Anjan, Shweta, Anderson, Anthony D, Prado, Clara E, Dalai, Sudeb C, Martinez, Octavio V, Komanduri, Krishna V

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PathoLive—Real-Time Pathogen Identification from Metagenomic Illumina Datasets von Tausch, Simon H., Loka, Tobias P., Schulze, Jakob M., Andrusch, Andreas, Klenner, Jeanette, Dabrowski, Piotr Wojciech, Lindner, Martin S., Nitsche, Andreas, Renard, Bernhard Y.

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Plasma Microbial Cell-Free DNA Sequencing from over 15,000 Patients Identified a Broad Spectrum of Pathogens von Park, Sarah Y, Chang, Eliza J, Ledeboer, Nathan, Messacar, Kevin, Lindner, Martin S, Venkatasubrahmanyam, Shivkumar, Wilber, Judith C, Vaughn, Marla Lay, Bercovici, Sivan, Perkins, Bradley A, Nolte, Frederick S

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Metagenomic abundance estimation and diagnostic testing on species level von Lindner, Martin S, Renard, Bernhard Y

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Next-generation sequencing of microbial cell-free DNA for rapid noninvasive diagnosis of infectious diseases in immunocompromised hosts [version 3; peer review: 2 approved, 1 appro... von Camargo, Jose F, Ahmed, Asim A, Lindner, Martin S, Morris, Michele I, Anjan, Shweta, Anderson, Anthony D, Prado, Clara E, Dalai, Sudeb C, Martinez, Octavio V, Komanduri, Krishna V

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Detection of Mpox Virus Using Microbial Cell-Free DNA: The Potential of Pathogen-Agnostic Sequencing for Rapid Identification of Emerging Pathogens von Park, Sarah Y, Lindner, Martin S, Brick, Kevin, Noll, Nicholas, Ounit, Rachid, Noa, Luis J, Sabzwari, Rabeeya, Trible, Ronald, Sniffen, Jason C, Roth, Prerana, Khan, Amir, Rodriguez, Anamaria, Sahra, Syeda, Davis, Michael J, Brar, Inderjeet S, Balasundaram, Gayathri, Nolte, Frederick S, Blauwkamp, Timothy A, Perkins, Bradley A, Bercovici, Sivan

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LiveKraken--real-time metagenomic classification of illumina data von Tausch, Simon H, Strauch, Benjamin, Andrusch, Andreas, Loka, Tobias P, Lindner, Martin S, Nitsche, Andreas, Renard, Bernhard Y

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Analyzing genome coverage profiles with applications to quality control in metagenomics von Lindner, Martin S, Kollock, Maximilian, Zickmann, Franziska, Renard, Bernhard Y

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Pipasic: similarity and expression correction for strain-level identification and quantification in metaproteomics von Penzlin, Anke, Lindner, Martin S, Doellinger, Joerg, Dabrowski, Piotr Wojtek, Nitsche, Andreas, Renard, Bernhard Y

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GIIRA--RNA-Seq driven gene finding incorporating ambiguous reads von Zickmann, Franziska, Lindner, Martin S, Renard, Bernhard Y

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HiLive: real-time mapping of illumina reads while sequencing von Lindner, Martin S, Strauch, Benjamin, Schulze, Jakob M, Tausch, Simon H, Dabrowski, Piotr W, Nitsche, Andreas, Renard, Bernhard Y

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Rapid, Noninvasive Diagnosis of Balamuthia mandrillaris Encephalitis by a Plasma-Based Next-Generation Sequencing Test von Kalyatanda, Gautam, Rand, Kenneth, Lindner, Martin S, Hong, David K, Sait Albayram, Mehmet, Gregory, Jason, Kresak, Jesse, Ibne, Karim M Ali, Cope, Jennifer R, Roy, Shantanu, Gary, Joy M, Reddy, Varalakshmi, Ahmed, Asim A

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SIMA: Simultaneous Multiple Alignment of LC/MS Peak Lists von VOSS, Bjorn, HANSELMANNT, Michael, RENARD, Bernhard Y, LINDNER, Martin S, KÖTHE, Ullrich, KIRCHNER, Marc, HAMPRECHT, Fred A

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Next-generation sequencing of microbial cell-free DNA for rapid noninvasive diagnosis of infectious diseases in immunocompromised hosts [version 1; peer review: 1 approved] von Camargo, Jose F, Ahmed, Asim A, Lindner, Martin S, Morris, Michele I, Anjan, Shweta, Anderson, Anthony D, Prado, Clara E, Dalai, Sudeb C, Martinez, Octavio V, Komanduri, Krishna V

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Next-generation sequencing of microbial cell-free DNA for rapid noninvasive diagnosis of infectious diseases in immunocompromised hosts [version 2; peer review: 1 approved, 1 appro... von Camargo, Jose F, Ahmed, Asim A, Lindner, Martin S, Morris, Michele I, Anjan, Shweta, Anderson, Anthony D, Prado, Clara E, Dalai, Sudeb C, Martinez, Octavio V, Komanduri, Krishna V

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Classical Heroes in the 21st Century: New Perspectives on Contemporary Cinematic Narratives of Antiquity

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Proposed recommendations for diagnosing and managing individuals with glutaric aciduria type I: second revision von Boy, Nikolas, Mühlhausen, Chris, Maier, Esther M., Heringer, Jana, Assmann, Birgit, Burgard, Peter, Dixon, Marjorie, Fleissner, Sandra, Greenberg, Cheryl R., Harting, Inga, Hoffmann, Georg F., Karall, Daniela, Koeller, David M., Krawinkel, Michael B., Okun, Jürgen G., Opladen, Thomas, Posset, Roland, Sahm, Katja, Zschocke, Johannes, Kölker, Stefan

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