Permutation importance: a corrected feature importance measure von Altmann, André, Toloşi, Laura, Sander, Oliver, Lengauer, Thomas

Volltext

RnBeads 2.0: comprehensive analysis of DNA methylation data von Müller, Fabian, Scherer, Michael, Assenov, Yassen, Lutsik, Pavlo, Walter, Jörn, Lengauer, Thomas, Bock, Christoph

Volltext

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure von Alexa, Adrian, Rahnenführer, Jörg, Lengauer, Thomas

Volltext

Computing topological parameters of biological networks von Assenov, Yassen, Ramírez, Fidel, Schelhorn, Sven-Eric, Lengauer, Thomas, Albrecht, Mario

Volltext

A new measure for functional similarity of gene products based on Gene Ontology von Schlicker, Andreas, Domingues, Francisco S, Rahnenführer, Jörg, Lengauer, Thomas

Volltext

Computational epigenetics von Bock, Christoph, Lengauer, Thomas

Volltext

From hype to reality: data science enabling personalized medicine von Fröhlich, Holger, Balling, Rudi, Beerenwinkel, Niko, Kohlbacher, Oliver, Kumar, Santosh, Lengauer, Thomas, Maathuis, Marloes H, Moreau, Yves, Murphy, Susan A, Przytycka, Teresa M, Rebhan, Michael, Röst, Hannes, Schuppert, Andreas, Schwab, Matthias, Spang, Rainer, Stekhoven, Daniel, Sun, Jimeng, Weber, Andreas, Ziemek, Daniel, Zupan, Blaz

Volltext

BinPacker: Packing-Based De Novo Transcriptome Assembly from RNA-seq Data von Liu, Juntao, Li, Guojun, Chang, Zheng, Yu, Ting, Liu, Bingqiang, McMullen, Rick, Chen, Pengyin, Huang, Xiuzhen

Volltext

DNA Methylation Dynamics of Human Hematopoietic Stem Cell Differentiation von Farlik, Matthias, Halbritter, Florian, Müller, Fabian, Choudry, Fizzah A., Ebert, Peter, Klughammer, Johanna, Farrow, Samantha, Santoro, Antonella, Ciaurro, Valerio, Mathur, Anthony, Uppal, Rakesh, Stunnenberg, Hendrik G., Ouwehand, Willem H., Laurenti, Elisa, Lengauer, Thomas, Frontini, Mattia, Bock, Christoph

Volltext

Quantitative comparison of within-sample heterogeneity scores for DNA methylation data von Scherer, Michael, Nebel, Almut, Franke, Andre, Walter, Jörn, Lengauer, Thomas, Bock, Christoph, Müller, Fabian, List, Markus

Volltext

A comprehensive analysis of 195 DNA methylomes reveals shared and cell-specific features of partially methylated domains von Salhab, Abdulrahman, Nordström, Karl, Gasparoni, Gilles, Kattler, Kathrin, Ebert, Peter, Ramirez, Fidel, Arrigoni, Laura, Müller, Fabian, Polansky, Julia K, Cadenas, Cristina, G Hengstler, Jan, Lengauer, Thomas, Manke, Thomas, Walter, Jörn

Volltext

AltAnalyze and DomainGraph: analyzing and visualizing exon expression data von Emig, Dorothea, Salomonis, Nathan, Baumbach, Jan, Lengauer, Thomas, Conklin, Bruce R, Albrecht, Mario

Volltext

Recruitment and activation of a lipid kinase by hepatitis C virus NS5A is essential for integrity of the membranous replication compartment von Reiss, Simon, Rebhan, Ilka, Backes, Perdita, Romero-Brey, Ines, Erfle, Holger, Matula, Petr, Kaderali, Lars, Poenisch, Marion, Blankenburg, Hagen, Hiet, Marie-Sophie, Longerich, Thomas, Diehl, Sarah, Ramirez, Fidel, Balla, Tamas, Rohr, Karl, Kaul, Artur, Bühler, Sandra, Pepperkok, Rainer, Lengauer, Thomas, Albrecht, Mario, Eils, Roland, Schirmacher, Peter, Lohmann, Volker, Bartenschlager, Ralf

Volltext

Genomic distribution and inter-sample variation of non-CpG methylation across human cell types von Ziller, Michael J, Müller, Fabian, Liao, Jing, Zhang, Yingying, Gu, Hongcang, Bock, Christoph, Boyle, Patrick, Epstein, Charles B, Bernstein, Bradley E, Lengauer, Thomas, Gnirke, Andreas, Meissner, Alexander

Volltext

Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development von Pan, Wei-Hung, Sommer, Felix, Falk-Paulsen, Maren, Ulas, Thomas, Best, Philipp, Fazio, Antonella, Kachroo, Priyadarshini, Luzius, Anne, Jentzsch, Marlene, Rehman, Ateequr, Müller, Fabian, Lengauer, Thomas, Walter, Jörn, Künzel, Sven, Baines, John F, Schreiber, Stefan, Franke, Andre, Schultze, Joachim L, Bäckhed, Fredrik, Rosenstiel, Philip

Volltext

Geno2pheno[HCV] - A Web-based Interpretation System to Support Hepatitis C Treatment Decisions in the Era of Direct-Acting Antiviral Agents von Kalaghatgi, Prabhav, Sikorski, Anna Maria, Knops, Elena, Rupp, Daniel, Sierra, Saleta, Heger, Eva, Neumann-Fraune, Maria, Beggel, Bastian, Walker, Andreas, Timm, Jörg, Walter, Hauke, Obermeier, Martin, Kaiser, Rolf, Bartenschlager, Ralf, Lengauer, Thomas

Volltext

AbLang: an antibody language model for completing antibody sequences von Olsen, Tobias H, Moal, Iain H, Deane, Charlotte M

Volltext

BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing von Lutsik, Pavlo, Feuerbach, Lars, Arand, Julia, Lengauer, Thomas, Walter, Jörn, Bock, Christoph

Volltext

MRFalign: protein homology detection through alignment of Markov random fields von Ma, Jianzhu, Wang, Sheng, Wang, Zhiyong, Xu, Jinbo

Volltext

Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping von Bock, Christoph, Walter, Jörn, Paulsen, Martina, Lengauer, Thomas

Volltext