The Emergence of SARS-CoV-2 Variants of Concern Is Driven by Acceleration of the Substitution Rate von Tay, John H, Porter, Ashleigh F, Wirth, Wytamma, Duchene, Sebastian

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Between a Pod and a Hard Test: The Deep Evolution of Amoebae von Kang, Seungho, Tice, Alexander K, Spiegel, Frederick W, Silberman, Jeffrey D, Pánek, Tomáš, Cepicka, Ivan, Kostka, Martin, Kosakyan, Anush, Alcântara, Daniel M C, Roger, Andrew J, Shadwick, Lora L, Smirnov, Alexey, Kudryavtsev, Alexander, Lahr, Daniel J G, Brown, Matthew W

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Beyond the SNP Threshold: Identifying Outbreak Clusters Using Inferred Transmissions von Stimson, James, Gardy, Jennifer, Mathema, Barun, Crudu, Valeriu, Cohen, Ted, Colijn, Caroline

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Identification of RNA Virus–Derived RdRp Sequences in Publicly Available Transcriptomic Data Sets von Olendraite, Ingrida, Brown, Katherine, Firth, Andrew E

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Elucidation of Codon Usage Signatures across the Domains of Life von Novoa, Eva Maria, Jungreis, Irwin, Jaillon, Olivier, Kellis, Manolis

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Fierce Selection and Interference in B-Cell Repertoire Response to Chronic HIV-1 von Nourmohammad, Armita, Otwinowski, Jakub, Łuksza, Marta, Mora, Thierry, Walczak, Aleksandra M

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Agent-based simulation of trust networks and opportunistic behaviours of hydraulic infrastructure project participants von Lv, Jiaqi, Wang, Xiang, Chen, Yaoyao

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Testing for reviewer anchoring in peer review: A randomized controlled trial von Liu, Ryan, Jecmen, Steven, Conitzer, Vincent, Fang, Fei, Shah, Nihar B

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Evolutionary and Ecological Drivers Shape the Emergence and Extinction of Foot-and-Mouth Disease Virus Lineages von Di Nardo, Antonello, Ferretti, Luca, Wadsworth, Jemma, Mioulet, Valerie, Gelman, Boris, Karniely, Sharon, Scherbakov, Alexey, Ziay, Ghulam, Özyörük, Fuat, Parlak, Ünal, Tuncer‐Göktuna, Pelin, Hassanzadeh, Reza, Khalaj, Mehdi, Dastoor, Seyed Mohsen, Abdollahi, Darab, Khan, Ehtisham-ul-Haq, Afzal, Muhammad, Hussain, Manzoor, Knowles, Nick J, King, Donald P

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Global Population Genomics of Two Subspecies of Cryptosporidium hominis during 500 Years of Evolution von Tichkule, Swapnil, Cacciò, Simone M., Robinson, Guy, Chalmers, Rachel M., Mueller, Ivo, Emery-Corbin, Samantha J., Eibach, Daniel, Tyler, Kevin M., van Oosterhout, Cock, Jex, Aaron R.

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Can expected error costs justify testing a hypothesis at multiple alpha levels rather than searching for an elusive optimal alpha? von Aisbett, Janet

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Evolutionary Profile for (Host and Viral) MLKL Indicates Its Activities as a Battlefront for Extensive Counteradaptation von Palmer, Suzette N, Chappidi, Sruthi, Pinkham, Chelsea, Hancks, Dustin C

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A cost-benefit analysis of WildFireSat, a wildfire monitoring satellite mission for Canada von Hope, Emily S, McKenney, Daniel W, Johnston, Lynn M, Johnston, Joshua M

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Invasion and Amplification of Endogenous Retroviruses in Dasyuridae Marsupial Genomes von Harding, Emma F, Mercer, Lewis K, Yan, Grace J H, Waters, Paul D, White, Peter A

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Complex Genomes of Early Nucleocytoviruses Revealed by Ancient Origins of Viral Aminoacyl-tRNA Synthetases von Kijima, Soichiro, Hikida, Hiroyuki, Delmont, Tom O, Gaïa, Morgan, Ogata, Hiroyuki

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Temporal Dynamics, Discovery, and Emergence of Human-Transmissible RNA Viruses von Lu, Lu, Zhang, Feifei, Brierley, Liam, Robertson, Gail, Chase-Topping, Margo, Lycett, Samantha, Woolhouse, Mark

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A Proofreading Mutation with an Allosteric Effect Allows a Cluster of SARS-CoV-2 Viruses to Rapidly Evolve von Mack, Andrew H, Menzies, Georgina, Southgate, Alex, Jones, D Dafydd, Connor, Thomas R

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The Slowing Rate of CpG Depletion in SARS-CoV-2 Genomes Is Consistent with Adaptations to the Human Host von Kumar, Akhil, Goyal, Nishank, Saranathan, Nandhini, Dhamija, Sonam, Saraswat, Saurabh, Menon, Manoj B, Vivekanandan, Perumal

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Impact of occluder device configurations in in-silico left atrial hemodynamics for the analysis of device-related thrombus von Albors, Carlos, Mill, Jordi, Olivares, Andy L, Iriart, Xavier, Cochet, Hubert, Camara, Oscar

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Interactomics: Dozens of Viruses, Co-evolving With Humans, Including the Influenza A Virus, may Actively Distort Human Aging von Teulière, Jérôme, Bernard, Charles, Bonnefous, Hugo, Martens, Johannes, Lopez, Philippe, Bapteste, Eric

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