Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens von Herry, Florian, Hérault, Frédéric, Lecerf, Frédéric, Lagoutte, Laëtitia, Doublet, Mathilde, Picard-Druet, David, Bardou, Philippe, Varenne, Amandine, Burlot, Thierry, Le Roy, Pascale, Allais, Sophie

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Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues von Degalez, Fabien, Charles, Mathieu, Foissac, Sylvain, Zhou, Haijuan, Guan, Dailu, Fang, Lingzhao, Klopp, Christophe, Allain, Coralie, Lagoutte, Laetitia, Lecerf, Frédéric, Acloque, Hervé, Giuffra, Elisabetta, Pitel, Frédérique, Lagarrigue, Sandrine

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RNA-Seq Data for Reliable SNP Detection and Genotype Calling: Interest for Coding Variant Characterization and Cis-Regulation Analysis by Allele-Specific Expression in Livestock Sp... von Jehl, Frederic, Degalez, Fabien, Bernard, Maria, Lecerf, Frederic, Lagoutte, Laetitia, Desert, Colette, Coulee, Manon, Bouchez, Olivier, Leroux, Sophie, Abasht, Behnam, Tixier-Boichard, Michele, Bed'hom, Bertrand, Burlot, Thierry, Gourichon, David, Bardou, Philippe, Acloque, Herve, Foissac, Sylvain, Djebali, Sarah, Giuffra, Elisabetta, Zerjal, Tatiana, Pitel, Frederique, Klopp, Christophe, Lagarrigue, Sandrine

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Long noncoding RNA repertoire in chicken liver and adipose tissue von Muret, Kévin, Klopp, Christophe, Wucher, Valentin, Esquerré, Diane, Legeai, Fabrice, Lecerf, Frédéric, Désert, Colette, Boutin, Morgane, Jehl, Frédéric, Acloque, Hervé, Giuffra, Elisabetta, Djebali, Sarah, Foissac, Sylvain, Derrien, Thomas, Lagarrigue, Sandrine

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Watch Out for a Second SNP: Focus on Multi-Nucleotide Variants in Coding Regions and Rescued Stop-Gained von Degalez, Fabien, Jehl, Frederic, Muret, Kevin, Bernard, Maria, Lecerf, Frederic, Lagoutte, Laetitia, Desert, Colette, Pitel, Frederique, Klopp, Christophe, Lagarrigue, Sandrine

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Transcriptome profiling of the feeding-to-fasting transition in chicken liver von Désert, Colette, Duclos, Michel J, Blavy, Pierre, Lecerf, Frédéric, Moreews, François, Klopp, Christophe, Aubry, Marc, Herault, Frédéric, Le Roy, Pascale, Berri, Cécile, Douaire, Madeleine, Diot, Christian, Lagarrigue, Sandrine

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Mutation in Bone Morphogenetic Protein Receptor-IB is Associated with Increased Ovulation Rate in Booroola Mérino Ewes von Mulsant, Philippe, Lecerf, Frédéric, Fabre, Stéphane, Schibler, Laurent, Monget, Philippe, Lanneluc, Isabelle, Pisselet, Claudine, Riquet, Juliette, Monniaux, Danielle, Callebaut, Isabelle, Cribiu, Edmond, Thimonier, Jacques, Teyssier, Jacques, Bodin, Loys, Cognié, Yves, Chitour, Nour, Elsen, Jean-Michel

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Variant calling and genotyping accuracy of ddRAD-seq: Comparison with 20X WGS in layers von Doublet, Mathilde, Degalez, Fabien, Lagarrigue, Sandrine, Lagoutte, Laetitia, Gueret, Elise, Allais, Sophie, Lecerf, Frédéric

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DNA Tests in Prolific Sheep from Eight Countries Provide New Evidence on Origin of the Booroola (FecB) Mutation von DAVIS, George H, GALLOWAY, Susan M, INOUNU, Ismeth, TIESNAMURTI, Bess, MARTYNIUK, Elzbieta, EYTHORSDOTTIR, Emma, MULSANT, Philippe, LECERF, Frederic, HANRAHAN, James P, BRADFORD, G. Eric, WILSON, Theresa, ROSS, Ian K, GREGAN, Scott M, WARD, Jamie, NIMBKAR, Bon V, GHALSASI, Pradip M, NIMBKAR, Chanda, GRAY, G. Douglas, SUBANDRIYO

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The duplicated genes database: identification and functional annotation of co-localised duplicated genes across genomes von Ouedraogo, Marion, Bettembourg, Charles, Bretaudeau, Anthony, Sallou, Olivier, Diot, Christian, Demeure, Olivier, Lecerf, Frédéric

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Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation von Roux, Pierre-François, Boitard, Simon, Blum, Yuna, Parks, Brian, Montagner, Alexandra, Mouisel, Etienne, Djari, Anis, Esquerré, Diane, Désert, Colette, Boutin, Morgane, Leroux, Sophie, Lecerf, Frédéric, Le Bihan-Duval, Elisabeth, Klopp, Christophe, Servin, Bertrand, Pitel, Frédérique, Duclos, Michel Jean, Guillou, Hervé, Lusis, Aldons J, Demeure, Olivier, Lagarrigue, Sandrine

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Limited RNA editing in exons of mouse liver and adipose von Lagarrigue, Sandrine, Hormozdiari, Farhad, Martin, Lisa J, Lecerf, Frédéric, Hasin, Yehudit, Rau, Christoph, Hagopian, Raffi, Xiao, Yu, Yan, Jun, Drake, Thomas A, Ghazalpour, Anatole, Eskin, Eleazar, Lusis, Aldons J

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The "1000 Gallus Genomes" project: sharing sequence data to better exploit them von Tixier-Boichard, Michele, Lecerf, Frederic, Heraulf, Frederic, Bardou, Philippe, Klopp, Christophe

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MarkerSet: a marker selection tool based on markers location and informativity in experimental designs von Demeure, Olivier, Lecerf, Frédéric

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Regulation of ovarian folliculogenesis by IGF and BMP system in domestic animals von Monget, Philippe, Fabre, Stéphane, Mulsant, Philippe, Lecerf, Frédéric, Elsen, Jean-Michel, Mazerbourg, Sabine, Pisselet, Claudine, Monniaux, Danielle

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Le projet « Mille Génomes Gallus » : partager les données de séquences pour mieux les utiliser von TIXIER-BOICHARD, Michèle, LECERF, Frédéric, HÉRAULT, Frédéric, BARDOU, Philippe, KLOPP, Christophe

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Regulation of LPCAT3 by LXR von Demeure, O., Lecerf, F., Duby, C., Desert, C., Ducheix, S., Guillou, H., Lagarrigue, S.

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Fine mapping of the FecL locus influencing prolificacy in Lacaune sheep von Drouilhet, L, Lecerf, F, Bodin, L, Fabre, S, Mulsant, P

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MarkerSet: a marker selection tool based on markers location and informativity in experimental designs von Demeure, Olivier, Lecerf, Frédéric

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Segregation of a major gene influencing ovulation in progeny of Lacaune meat sheep von Bodin, L. ((Institut National de la Recherche Agronomique, Castanet-Tolosan (France). Centre de Toulouse, Station d'Amélioration Génétique des Animaux)), SanCristobal, M, Lecerf, F, Mulsant, P, Bibe, B, Lajous, D, Belloc, J.P, Eychenne, F, Amigues, Y, Elsen, J.M

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