RNAmmer: consistent and rapid annotation of ribosomal RNA genes von Lagesen, Karin, Hallin, Peter, Rødland, Einar Andreas, Stærfeldt, Hans-Henrik, Rognes, Torbjørn, Ussery, David W

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CMG-biotools, a free workbench for basic comparative microbial genomics von Vesth, Tammi, Lagesen, Karin, Acar, Öncel, Ussery, David

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Assessing diversity of the female urine microbiota by high throughput sequencing of 16S rDNA amplicons von Siddiqui, Huma, Nederbragt, Alexander J, Lagesen, Karin, Jeansson, Stig L, Jakobsen, Kjetill S

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Alterations of microbiota in urine from women with interstitial cystitis von Siddiqui, Huma, Lagesen, Karin, Nederbragt, Alexander J, Jeansson, Stig L, Jakobsen, Kjetill S

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Use of high throughput sequencing and light microscopy show contrasting results in a study of phytoplankton occurrence in a freshwater environment von Xiao, Xi, Sogge, Hanne, Lagesen, Karin, Tooming-Klunderud, Ave, Jakobsen, Kjetill S, Rohrlack, Thomas

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NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences von Khelik, Ksenia, Lagesen, Karin, Sandve, Geir Kjetil, Rognes, Torbjørn, Nederbragt, Alexander Johan

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Comparative genomics of quinolone-resistant Escherichia coli from broilers and humans in Norway von Slettemeås, Jannice Schau, Sekse, Camilla, Sunde, Marianne, Norström, Madelaine, Wester, Astrid Louise, Naseer, Umaer, Simonsen, Gunnar Skov, Ulstad, Charlotte Rosenberg, Urdahl, Anne Margrete, Lagesen, Karin

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Development and application of a whole genome amplicon sequencing method for infectious salmon anemia virus (ISAV) von Spilsberg, Bjørn, Leithaug, Magnus, Christiansen, Debes Hammershaimb, Dahl, Maria Marjunardóttir, Petersen, Petra Elisabeth, Lagesen, Karin, Fiskebeck, Eve M L Z, Moldal, Torfinn, Boye, Mette

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Polyether ionophore resistance in a one health perspective von Frederiksen, Rikki Franklin, Slettemeås, Jannice Schau, Granstad, Silje, Lagesen, Karin, Pikkemaat, Mariel G, Urdahl, Anne Margrete, Simm, Roger

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Escherichia coli multilocus sequence type 38 from humans and broiler production represent distinct monophyletic groups von Mo, Solveig Sølverød, Fiskebeck, Eve Zeyl, Slettemeås, Jannice Schau, Lagesen, Karin, Nilsson, Oskar, Naseer, Umaer, Jørgensen, Silje Bakken, Thorsteinsdottir, Thorunn Rafnar, Sunde, Marianne

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Phylogeography and host specificity of Pasteurellaceae pathogenic to sea-farmed fish in the north-east Atlantic von Gulla, Snorre, Colquhoun, Duncan J., Olsen, Anne Berit, Spilsberg, Bjørn, Lagesen, Karin, Åkesson, Caroline P., Strøm, Sverri, Manji, Farah, Birkbeck, Thomas H., Nilsen, Hanne K.

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Genomic characterization of Campylobacter jejuni strain M1 von Friis, Carsten, Wassenaar, Trudy M, Javed, Muhammad A, Snipen, Lars, Lagesen, Karin, Hallin, Peter F, Newell, Diane G, Toszeghy, Monique, Ridley, Anne, Manning, Georgina, Ussery, David W

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From Green to Red: Horizontal Gene Transfer of the Phycoerythrin Gene Cluster between Planktothrix Strains von TOOMING-KLUNDERUD, Ave, SOGGE, Hanne, ROUNGE, Trine Ballestad, NEDERBRAGT, Alexander J, LAGESEN, Karin, GLÖCKNER, Gernot, HAYES, Paul K, ROHRLACK, Thomas, JAKOBSEN, Kjetill S

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Comparative Genome Analyses of Wild Type- and Quinolone Resistant Escherichia coli Indicate Dissemination of QREC in the Norwegian Broiler Breeding Pyramid von Kaspersen, Håkon, Fiskebeck, Eve Zeyl, Sekse, Camilla, Slettemeås, Jannice Schau, Urdahl, Anne Margrete, Norström, Madelaine, Lagesen, Karin, Simm, Roger

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Genome dynamics in major bacterial pathogens von Ambur, Ole Herman, Davidsen, Tonje, Frye, Stephan A, Balasingham, Seetha V, Lagesen, Karin, Rognes, Torbjørn, Tønjum, Tone

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Analysis of intra-genomic GC content homogeneity within prokaryotes von Bohlin, Jon, Snipen, Lars, Hardy, Simon P, Kristoffersen, Anja B, Lagesen, Karin, Dønsvik, Torunn, Skjerve, Eystein, Ussery, David W

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One Health Surveillance Codex: promoting the adoption of One Health solutions within and across European countries von Filter, Matthias, Buschhardt, Tasja, Dórea, Fernanda, Lopez de Abechuco, Estibaliz, Günther, Taras, Sundermann, Esther M., Gethmann, Jörn, Dups-Bergmann, Johanna, Lagesen, Karin, Ellis-Iversen, Johanne

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An Official Outbreak Investigation of Acute Haemorrhagic Diarrhoea in Dogs in Norway Points to Providencia alcalifaciens as a Likely Cause von Jørgensen, Hannah Joan, Valheim, Mette, Sekse, Camilla, Bergsjø, Bjarne Asbjørn, Wisløff, Helene, Nørstebø, Simen Foyn, Skancke, Ellen, Lagesen, Karin, Haaland, Anita Haug, Rodriguez-Campos, Sabrina, Sjurseth, Siri Kulberg, Hofshagen, Merete, Jarp, Jorun, Tronerud, Ole-Herman, Johannessen, Gro Skøien, Heggelund, Monica, Rygg, Sasja, Christensen, Ellen, Boye, Mette, Gjerset, Britt, Sandvik, Morten, Soltvedt, Eiril Moen, Wolff, Cecilia

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Adding Complexity to Complexity: Gene Family Evolution in Polyploids von Mable, Barbara K., Brysting, Anne K., Jørgensen, Marte H., Carbonell, Anna K. Z., Kiefer, Christiane, Ruiz-Duarte, Paola, Lagesen, Karin, Koch, Marcus A.

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Genomic comparisons of Brucella spp. and closely related bacteria using base compositional and proteome based methods von Bohlin, Jon, Snipen, Lars, Cloeckaert, Axel, Lagesen, Karin, Ussery, David, Kristoffersen, Anja B, Godfroid, Jacques

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