Sparse and compositionally robust inference of microbial ecological networks von Kurtz, Zachary D, Müller, Christian L, Miraldi, Emily R, Littman, Dan R, Blaser, Martin J, Bonneau, Richard A

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Helminth colonization is associated with increased diversity of the gut microbiota von Lee, Soo Ching, Tang, Mei San, Lim, Yvonne A L, Choy, Seow Huey, Kurtz, Zachary D, Cox, Laura M, Gundra, Uma Mahesh, Cho, Ilseung, Bonneau, Richard, Blaser, Martin J, Chua, Kek Heng, Loke, P'ng

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Helminth infection promotes colonization resistance via type 2 immunity von Ramanan, Deepshika, Bowcutt, Rowann, Lee, Soo Ching, San Tang, Mei, Kurtz, Zachary D., Ding, Yi, Honda, Kenya, Gause, William C., Blaser, Martin J., Bonneau, Richard A., Lim, Yvonne A.L., Loke, P'ng, Cadwell, Ken

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Alternatively activated macrophages derived from monocytes and tissue macrophages are phenotypically and functionally distinct von Gundra, Uma Mahesh, Girgis, Natasha M., Ruckerl, Dominik, Jenkins, Stephen, Ward, Lauren N., Kurtz, Zachary D., Wiens, Kirsten E., Tang, Mei San, Basu-Roy, Upal, Mansukhani, Alka, Allen, Judith E., Loke, P'ng

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A single early-in-life macrolide course has lasting effects on murine microbial network topology and immunity von Ruiz, Victoria E., Battaglia, Thomas, Kurtz, Zachary D., Bijnens, Luc, Ou, Amy, Engstrand, Isak, Zheng, Xuhui, Iizumi, Tadasu, Mullins, Briana J., Müller, Christian L., Cadwell, Ken, Bonneau, Richard, Perez-Perez, Guillermo I., Blaser, Martin J.

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Fungi stabilize connectivity in the lung and skin microbial ecosystems von Tipton, Laura, Müller, Christian L, Kurtz, Zachary D, Huang, Laurence, Kleerup, Eric, Morris, Alison, Bonneau, Richard, Ghedin, Elodie

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Antibiotic perturbation of the murine gut microbiome enhances the adiposity, insulin resistance, and liver disease associated with high-fat diet von Mahana, Douglas, Trent, Chad M, Kurtz, Zachary D, Bokulich, Nicholas A, Battaglia, Thomas, Chung, Jennifer, Müller, Christian L, Li, Huilin, Bonneau, Richard A, Blaser, Martin J

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Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project von Liu, Menghan, Koh, Hyunwook, Kurtz, Zachary D, Battaglia, Thomas, PeBenito, Amanda, Li, Huilin, Nazzal, Lama, Blaser, Martin J

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Shrinkage improves estimation of microbial associations under different normalization methods von Badri, Michelle, Kurtz, Zachary D, Bonneau, Richard, Müller, Christian L

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Correction: Helminth Colonization Is Associated with Increased Diversity of the Gut Microbiota von Lee, Soo Ching, Tang, Mei San, Lim, Yvonne A L, Choy, Seow Huey, Kurtz, Zachary D, Cox, Laura M, Gundra, Uma Mahesh, Cho, Ilseung, Bonneau, Richard, Blaser, Martin J, Chua, Kek Heng, Loke, P'ng

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Glycosuria Alters Uropathogenic Escherichia coli Global Gene Expression and Virulence von Islam, Md Jahirul, Bagale, Kamal, John, Preeti P, Kurtz, Zachary, Kulkarni, Ritwij

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Lung microbiome and host immune tone in subjects with idiopathic pulmonary fibrosis treated with inhaled interferon-γ von Wang, Jing, Lesko, Melissa, Badri, Michelle H, Kapoor, Bianca C, Wu, Benjamin G, Li, Yonghua, Smaldone, Gerald C, Bonneau, Richard, Kurtz, Zachary D, Condos, Rany, Segal, Leopoldo N

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Roles of putative type II secretion and type IV pilus systems in the virulence of uropathogenic Escherichia coli von Kulkarni, Ritwij, Dhakal, Bijaya K, Slechta, E Susan, Kurtz, Zachary, Mulvey, Matthew A, Thanassi, David G

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Polygon Sequence Matching for Label Association in Autonomous Vehicle Logs von KURTZ, Zachary

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Sparse and Compositionally Robust Inference of Microbial Ecological Networks: e1004226 von Kurtz, Zachary D, Müller, Christian L, Miraldi, Emily R, Littman, Dan R, Blaser, Martin J, Bonneau, Richard A

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Helminth Colonization Is Associated with Increased Diversity of the Gut Microbiota: e2880 von Lee, Soo Ching, Tang, Mei San, Lim, Yvonne AL, Choy, Seow Huey, Kurtz, Zachary D, Cox, Laura M, Gundra, Uma Mahesh, Cho, Ilseung, Bonneau, Richard, Blaser, Martin J, Chua, Kek Heng, Loke, ng

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METHODS AND SYSTEM FOR GENERATING A LANE-LEVEL MAP FOR AN AREA OF INTEREST FOR NAVIGATION OF AN AUTONOMOUS VEHICLE von DELLA PENNA, Mauro, KURTZ, Zachary

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POLYGONSEQUENZABGLEICH FÜR DIE BESCHRIFTUNGSZUORDNUNG IN PROTOKOLLEN AUTONOMER FAHRZEUGE von Kurtz, Zachary

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METHODS AND SYSTEM FOR GENERATING A LANE-LEVEL MAP FOR AN AREA OF INTEREST FOR NAVIGATION OF AN AUTONOMOUS VEHICLE von DELLA PENNA, Mauro, KURTZ, Zachary

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Test Suites as a Source of Training Data for Static Analysis Alert Classifiers von Flynn, Lori, Snavely, William, Kurtz, Zachary

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