Algorithm sensitivity analysis and parameter tuning for tissue image segmentation pipelines von Teodoro, George, Kurç, Tahsin M, Taveira, Luís F R, Melo, Alba C M A, Gao, Yi, Kong, Jun, Saltz, Joel H

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Sparse autoencoder for unsupervised nucleus detection and representation in histopathology images von Hou, Le, Nguyen, Vu, Kanevsky, Ariel B., Samaras, Dimitris, Kurc, Tahsin M., Zhao, Tianhao, Gupta, Rajarsi R., Gao, Yi, Chen, Wenjin, Foran, David, Saltz, Joel H.

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ChampKit: A framework for rapid evaluation of deep neural networks for patch-based histopathology classification von Kaczmarzyk, Jakub R., Gupta, Rajarsi, Kurc, Tahsin M., Abousamra, Shahira, Saltz, Joel H., Koo, Peter K.

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A Methodology for Texture Feature-based Quality Assessment in Nucleus Segmentation of Histopathology Image von Wen, Si, Kurc, Tahsin M., Gao, Yi, Zhao, Tianhao, Saltz, Joel H., Zhu, Wei

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Dataset of segmented nuclei in hematoxylin and eosin stained histopathology images of ten cancer types von Hou, Le, Gupta, Rajarsi, Van Arnam, John S., Zhang, Yuwei, Sivalenka, Kaustubh, Samaras, Dimitris, Kurc, Tahsin M., Saltz, Joel H.

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Digital Pathology: Data-Intensive Frontier in Medical Imaging von Cooper, Lee A. D., Sharma, Ashish, Kurc, Tahsin M., Brat, Daniel J., Saltz, Joel H., Carter, Alexis B., Farris, Alton B., Wang, Fusheng, Kong, Jun, Gutman, David A., Widener, Patrick, Pan, Tony C., Cholleti, Sharath R.

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GaNDLF: the generally nuanced deep learning framework for scalable end-to-end clinical workflows von Pati, Sarthak, Thakur, Siddhesh P., Hamamcı, İbrahim Ethem, Baid, Ujjwal, Baheti, Bhakti, Bhalerao, Megh, Güley, Orhun, Mouchtaris, Sofia, Lang, David, Thermos, Spyridon, Gotkowski, Karol, González, Camila, Grenko, Caleb, Getka, Alexander, Edwards, Brandon, Sheller, Micah, Wu, Junwen, Karkada, Deepthi, Panchumarthy, Ravi, Ahluwalia, Vinayak, Zou, Chunrui, Bashyam, Vishnu, Li, Yuemeng, Haghighi, Babak, Chitalia, Rhea, Abousamra, Shahira, Kurc, Tahsin M., Gastounioti, Aimilia, Er, Sezgin, Bergman, Mark, Saltz, Joel H., Fan, Yong, Shah, Prashant, Mukhopadhyay, Anirban, Tsaftaris, Sotirios A., Menze, Bjoern, Davatzikos, Christos, Kontos, Despina, Karargyris, Alexandros, Umeton, Renato, Mattson, Peter, Bakas, Spyridon

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A parallel scaled conjugate-gradient algorithm for the solution phase of gathering radiosity on hypercubes von Kurç, Tahsin M., Aykanat, Cevdet, özgüç, Bülent

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Comparison of Different Classifiers with Active Learning to Support Quality Control in Nucleus Segmentation in Pathology Images von Wen, Si, Kurc, Tahsin M, Hou, Le, Saltz, Joel H, Gupta, Rajarsi R, Batiste, Rebecca, Zhao, Tianhao, Nguyen, Vu, Samaras, Dimitris, Zhu, Wei

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Feature-based analysis of large-scale spatio-temporal sensor data on hybrid architectures von Saltz, Joel H., Teodoro, George, Pan, Tony, Cooper, Lee A.D., Kong, Jun, Klasky, Scott, Kurc, Tahsin M.

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A Grid-Based Image Archival and Analysis System von Hastings, Shannon, Oster, Scott, Langella, Stephen, Kurc, Tahsin M., Pan, Tony, Catalyurek, Umit V., Saltz, Joel H.

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Efficient microscopy image analysis on CPU-GPU systems with cost-aware irregular data partitioning von Barreiros, Willian, Melo, Alba C.M.A., Kong, Jun, Ferreira, Renato, Kurc, Tahsin M., Saltz, Joel H., Teodoro, George

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Informatics in radiology: GridCAD: grid-based computer-aided detection system von Pan, Tony C, Gurcan, Metin N, Langella, Stephen A, Oster, Scott W, Hastings, Shannon L, Sharma, Ashish, Rutt, Benjamin G, Ervin, David W, Kurc, Tahsin M, Siddiqui, Khan M, Saltz, Joel H, Siegel, Eliot L

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GridCAD: Grid-based Computer-aided Detection System von Pan, Tony C., Gurcan, Metin N., Langella, Stephen A., Oster, Scott W., Hastings, Shannon L., Sharma, Ashish, Rutt, Benjamin G., Ervin, David W., Kurc, Tahsin M., Siddiqui, Khan M., Saltz, Joel H., Siegel, Eliot L.

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Efficient irregular wavefront propagation algorithms on hybrid CPU–GPU machines von Teodoro, George, Pan, Tony, Kurc, Tahsin M., Kong, Jun, Cooper, Lee A.D., Saltz, Joel H.

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A caGrid-enabled, learning based image segmentation method for histopathology specimens von Foran, D.J., Lin Yang, Tuzel, O., Wenjin Chen, Jun Hu, Kurc, T.M., Ferreira, R., Saltz, J.H.

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High-throughput Analysis of Large Microscopy Image Datasets on CPU-GPU Cluster Platforms von Teodoro, George, Pan, Tony, Kurc, Tahsin M., Jun Kong, Cooper, Lee A. D., Podhorszki, Norbert, Klasky, Scott, Saltz, Joel H.

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Efficient irregular wavefront propagation algorithms on hybrid CPUaGPU machines von Teodoro, George, Pan, Tony, Kurc, Tahsin M, Kong, Jun, Cooper, Lee AD, Saltz, Joel H

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Accelerating Large Scale Image Analyses on Parallel, CPU-GPU Equipped Systems von Teodoro, G., Kurc, T. M., Pan, T., Cooper, L. A. D., Jun Kong, Widener, P., Saltz, J. H.

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Digital Pathology: Data-Intensive Frontier in Medical Imaging: Health-information sharing, specifically of digital pathology, is the subject of this paper which discusses how shari... von Cooper, Lee A D, Carter, Alexis B, Farris, Alton B, Wang, Fusheng, Kong, Jun, Gutman, David A, Widener, Patrick, Pan, Tony C, Cholleti, Sharath R, Sharma, Ashish, Kurc, Tahsin M, Brat, Daniel J, Saltz, Joel H

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