Reverse engineering environmental metatranscriptomes clarifies best practices for eukaryotic assembly von Krinos, Arianna I, Cohen, Natalie R, Follows, Michael J, Alexander, Harriet

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Ecosystem-scale nutrient cycling responses to increasing air temperatures vary with lake trophic state von Farrell, Kaitlin J., Ward, Nicole K., Krinos, Arianna I., Hanson, Paul C., Daneshmand, Vahid, Figueiredo, Renato J., Carey, Cayelan C.

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Correction: Reverse engineering environmental metatranscriptomes clarifies best practices for eukaryotic assembly von Krinos, Arianna I, Cohen, Natalie R, Follows, Michael J, Alexander, Harriet

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Missing microbial eukaryotes and misleading meta-omic conclusions von Krinos, Arianna I., Mars Brisbin, Margaret, Hu, Sarah K., Cohen, Natalie R., Rynearson, Tatiana A., Follows, Michael J., Schulz, Frederik, Alexander, Harriet

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Time-series metagenomics reveals changing protistan ecology of a temperate dimictic lake von Krinos, Arianna I, Bowers, Robert M, Rohwer, Robin R, McMahon, Katherine D, Woyke, Tanja, Schulz, Frederik

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Protistan community composition and metabolism in the North Pacific Subtropical Gyre: Influences of mesoscale eddies and depth von Gleich, Samantha J., Hu, Sarah K., Krinos, Arianna I., Caron, David A.

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Eukaryotic genomes from a global metagenomic data set illuminate trophic modes and biogeography of ocean plankton von Alexander, Harriet, Hu, Sarah K, Krinos, Arianna I, Pachiadaki, Maria, Tully, Benjamin J, Neely, Christopher J, Reiter, Taylor

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Microeukaryote metabolism across the western North Atlantic Ocean revealed through autonomous underwater profiling von Cohen, Natalie R., Krinos, Arianna I., Kell, Riss M., Chmiel, Rebecca J., Moran, Dawn M., McIlvin, Matthew R., Lopez, Paloma Z., Barth, Alexander J., Stone, Joshua P., Alanis, Brianna A., Chan, Eric W., Breier, John A., Jakuba, Michael V., Johnson, Rod, Alexander, Harriet, Saito, Mak A.

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Vitamin B12 conveys a protective advantage to phycosphere-associated bacteria at high temperatures von Mars Brisbin, Margaret, Schofield, Alese, McIlvin, Matthew R, Krinos, Arianna I, Alexander, Harriet, Saito, Mak A

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Marine Microeukaryote Metatranscriptomics: Sample Processing and Bioinformatic Workflow Recommendations for Ecological Applications von Cohen, Natalie R., Alexander, Harriet, Krinos, Arianna I., Hu, Sarah K., Lampe, Robert H.

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Enhancing collaboration between ecologists and computer scientists: lessons learned and recommendations forward von Carey, Cayelan C., Ward, Nicole K., Farrell, Kaitlin J., Lofton, Mary E., Krinos, Arianna I., McClure, Ryan P., Subratie, Kensworth C., Figueiredo, Renato J., Doubek, Jonathan P., Hanson, Paul C., Papadopoulos, Philip, Arzberger, Peter

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The Bioinformatics Virtual Coordination Network: An Open-Source and Interactive Learning Environment von Tully, Benjamin J., Buongiorno, Joy, Cohen, Ashley B., Cram, Jacob A., Garber, Arkadiy I., Hu, Sarah K., Krinos, Arianna I., Leftwich, Philip T., Marshall, Alexis J., Sieradzki, Ella T., Speth, Daan R., Suter, Elizabeth A, Trivedi, Christopher B., Valentin-Alvarado, Luis E., Weissman, JL

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Seasonal changes and the unexpected impact of environmental disturbance on skin bacteria of individual amphibians in a natural habitat von Walke, Jenifer B, Becker, Matthew H, Krinos, Arianna, Chang, Elizabeth A B, Santiago, Celina, Umile, Thomas P, Minbiole, Kevin P C, Belden, Lisa K

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EUKulele: Taxonomic annotation of the unsung eukaryotic microbes von Krinos, Arianna, Hu, Sarah, Cohen, Natalie, Alexander, Harriet

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Ocean acidification: effects of pH on 45Ca uptake by lobster branchiostegites von Nagle, Lilian, Brown, Skye, Krinos, Arianna, Ahearn, Gregory A.

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Ocean acidification: effects of pH on 45 Ca uptake by lobster branchiostegites von Nagle, Lilian, Brown, Skye, Krinos, Arianna, Ahearn, Gregory A

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Protistan metabolism across the western North Atlantic Ocean revealed through autonomous underwater profiling von Cohen, Natalie, Krinos, Arianna, Alexander, Harriet, Saito, Mak

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EUKulele: Taxonomic annotation of the unsung eukaryotic microbes von Krinos, Arianna I, Hu, Sarah K, Cohen, Natalie R, Alexander, Harriet

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Additional file 1 of Time-series metagenomics reveals changing protistan ecology of a temperate dimictic lake von Krinos, Arianna I., Bowers, Robert M., Rohwer, Robin R., McMahon, Katherine D., Woyke, Tanja, Schulz, Frederik

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EUKulele databases for Phaeocystis mapping (Krinos et al. 2023) von Krinos, Arianna, Brisbin, Margaret Mars, Hu, Sarah, Cohen, Natalie, Rynearson, Tatiana, Follows, Michael, Schulz, Frederik, Alexander, Harriet

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