Enhancements and modifications of primer design program Primer3 von Koressaar, Triinu, Remm, Maido

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Primer3_masker: integrating masking of template sequence with primer design software von Kõressaar, Triinu, Lepamets, Maarja, Kaplinski, Lauris, Raime, Kairi, Andreson, Reidar, Remm, Maido

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StrainSeeker: fast identification of bacterial strains from raw sequencing reads using user-provided guide trees von Roosaare, Märt, Vaher, Mihkel, Kaplinski, Lauris, Möls, Märt, Andreson, Reidar, Lepamets, Maarja, Kõressaar, Triinu, Naaber, Paul, Kõljalg, Siiri, Remm, Maido

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Primer3--new capabilities and interfaces von Untergasser, Andreas, Cutcutache, Ioana, Koressaar, Triinu, Ye, Jian, Faircloth, Brant C, Remm, Maido, Rozen, Steven G

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Phenotypic and Molecular Epidemiology of ESBL-, AmpC-, and Carbapenemase-Producing Escherichia coli in Northern and Eastern Europe von Sepp, Epp, Andreson, Reidar, Balode, Arta, Bilozor, Anastasia, Brauer, Age, Egorova, Svetlana, Huik, Kristi, Ivanova, Marina, Kaftyreva, Lidia, Kõljalg, Siiri, Kõressaar, Triinu, Makarova, Maria, Miciuleviciene, Jolanta, Pai, Kristiine, Remm, Maido, Rööp, Tiiu, Naaber, Paul

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Application of Molecular Methods for Carbapenemase Detection von Bilozor, Anastasia, Balode, Arta, Chakhunashvili, Giorgi, Chumachenko, Tetyana, Egorova, Svetlana, Ivanova, Marina, Kaftyreva, Liidia, Kõljalg, Siiri, Kõressaar, Triinu, Lysenko, Olga, Miciuleviciene, Jolanta, Mändar, Reet, Lis, Danuta O, Wesolowska, Monika Pomorska, Ratnik, Kaspar, Remm, Maido, Rudzko, Jelena, Rööp, Tiiu, Saule, Mara, Sepp, Epp, Shyshporonok, Julia, Titov, Leonid, Tsereteli, David, Naaber, Paul

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Limnobacter spp. as newly detected phenol-degraders among Baltic Sea surface water bacteria characterised by comparative analysis of catabolic genes von Vedler, Eve, Heinaru, Eeva, Jutkina, Jekaterina, Viggor, Signe, Koressaar, Triinu, Remm, Maido, Heinaru, Ain

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Development of a multiplex real-time PCR assay for the rapid diagnosis of neonatal late onset sepsis von van den Brand, Marre, Peters, Remco P.H., Catsburg, Arnold, Rubenjan, Anna, Broeke, Ferdi J., van den Dungen, Frank A.M., van Weissenbruch, Mirjam M., van Furth, A. Marceline, Kõressaar, Triinu, Remm, Maido, Savelkoul, Paul H.M., Bos, Martine P.

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Characterization of Species-Specific Repeats in 613 Prokaryotic Species von KORESSAAR, Triinu, REMM, Maido

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Automatic identification of species-specific repetitive DNA sequences and their utilization for detecting microbial organisms von Koressaar, Triinu, Jõers, Kai, Remm, Maido

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