Functional Long Non-coding RNAs Evolve from Junk Transcripts von Palazzo, Alexander F., Koonin, Eugene V.

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Multiple origins of viral capsid proteins from cellular ancestors von Krupovic, Mart, Koonin, Eugene V.

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Origins and evolution of CRISPR-Cas systems von Koonin, Eugene V, Makarova, Kira S

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COG database update: focus on microbial diversity, model organisms, and widespread pathogens von Galperin, Michael Y, Wolf, Yuri I, Makarova, Kira S, Vera Alvarez, Roberto, Landsman, David, Koonin, Eugene V

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Viruses and mobile elements as drivers of evolutionary transitions von Koonin, Eugene V.

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Multiple origins of prokaryotic and eukaryotic single-stranded DNA viruses from bacterial and archaeal plasmids von Kazlauskas, Darius, Varsani, Arvind, Koonin, Eugene V., Krupovic, Mart

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The crAss-like Phage Group: How Metagenomics Reshaped the Human Virome von Koonin, Eugene V., Yutin, Natalya

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Origin of eukaryotes from within archaea, archaeal eukaryome and bursts of gene gain: eukaryogenesis just made easier? von Koonin, Eugene V.

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The logic of virus evolution von Koonin, Eugene V., Dolja, Valerian V., Krupovic, Mart

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Functional and evolutionary implications of gene orthology von Gabaldón, Toni, Koonin, Eugene V.

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Evolutionary plasticity and functional versatility of CRISPR systems von Koonin, Eugene V, Makarova, Kira S

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Ongoing global and regional adaptive evolution of SARS-CoV-2 von Rochman, Nash D., Wolf, Yuri I., Faure, Guilhem, Mutz, Pascal, Zhang, Feng, Koonin, Eugene V.

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Global Organization and Proposed Megataxonomy of the Virus World von Koonin, Eugene V., Dolja, Valerian V., Krupovic, Mart, Varsani, Arvind, Wolf, Yuri I., Yutin, Natalya, Zerbini, F. Murilo, Kuhn, Jens H.

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Diversity, classification and evolution of CRISPR-Cas systems von Koonin, Eugene V, Makarova, Kira S, Zhang, Feng

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Cancer-mutation network and the number and specificity of driver mutations von Iranzo, Jaime, Martincorena, Iñigo, Koonin, Eugene V.

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Circular RNAs from linear viral RNA genomes: A distinct dimension in the virus world von Koonin, Eugene V

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The origin and early evolution of eukaryotes in the light of phylogenomics von Koonin, Eugene V

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Deep Roots and Splendid Boughs of the Global Plant Virome von Dolja, Valerian V, Krupovic, Mart, Koonin, Eugene V

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Genomic determinants of pathogenicity in SARS-CoV-2 and other human coronaviruses von Gussow, Ayal B., Auslander, Noam, Faure, Guilhem, Wolf, Yuri I., Zhang, Feng, Koonin, Eugene V.

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Origins and Evolution of the Global RNA Virome von Wolf, Yuri I, Kazlauskas, Darius, Iranzo, Jaime, Lucía-Sanz, Adriana, Kuhn, Jens H, Krupovic, Mart, Dolja, Valerian V, Koonin, Eugene V

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