Microbial ecology of expanding oxygen minimum zones von Wright, Jody J., Konwar, Kishori M., Hallam, Steven J.

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Illuminating microbial dark matter in meromictic Sakinaw Lake von Gies, Esther A, Konwar, Kishori M, Beatty, J Thomas, Hallam, Steven J

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programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities von Leung, Kaston, Zahn, Hans, Leaver, Timothy, Konwar, Kishori M, Hanson, Niels W, Pagé, Antoine P, Lo, Chien-Chi, Chain, Patrick S, Hallam, Steven J, Hansen, Carl L

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MetaPathways: a modular pipeline for constructing pathway/genome databases from environmental sequence information von Konwar, Kishori M, Hanson, Niels W, Pagé, Antoine P, Hallam, Steven J

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Composition and Associations of the Infant Gut Fungal Microbiota with Environmental Factors and Childhood Allergic Outcomes von Boutin, Rozlyn C. T., Sbihi, Hind, McLaughlin, Ryan J., Hahn, Aria S., Konwar, Kishori M., Loo, Rachelle S., Dai, Darlene, Petersen, Charisse, Brinkman, Fiona S. L., Winsor, Geoffrey L., Sears, Malcolm R., Moraes, Theo J., Becker, Allan B., Azad, Meghan B., Mandhane, Piush J., Subbarao, Padmaja, Turvey, Stuart E., Finlay, B. Brett

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Predicting metabolic modules in incomplete bacterial genomes with MetaPathPredict von Geller-McGrath, David, Konwar, Kishori M, Edgcomb, Virginia P, Pachiadaki, Maria, Roddy, Jack W, Wheeler, Travis J, McDermott, Jason E

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LCA: an entropy-based measure for taxonomic assignment within assembled metagenomes von Hanson, Niels W, Konwar, Kishori M, Hallam, Steven J

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Expanding the boundaries of local similarity analysis von Durno, W Evan, Hanson, Niels W, Konwar, Kishori M, Hallam, Steven J

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Genomic properties of Marine Group A bacteria indicate a role in the marine sulfur cycle von Wright, Jody J, Mewis, Keith, Hanson, Niels W, Konwar, Kishori M, Maas, Kendra R, Hallam, Steven J

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Metabolic pathways for the whole community von Hanson, Niels W, Konwar, Kishori M, Hawley, Alyse K, Altman, Tomer, Karp, Peter D, Hallam, Steven J

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Metagenomics of Hydrocarbon Resource Environments Indicates Aerobic Taxa and Genes to be Unexpectedly Common von An, Dongshan, Caffrey, Sean M, Soh, Jung, Agrawal, Akhil, Brown, Damon, Budwill, Karen, Dong, Xiaoli, Dunfield, Peter F, Foght, Julia, Gieg, Lisa M, Hallam, Steven J, Hanson, Niels W, He, Zhiguo, Jack, Thomas R, Klassen, Jonathan, Konwar, Kishori M, Kuatsjah, Eugene, Li, Carmen, Larter, Steve, Leopatra, Verlyn, Nesbø, Camilla L, Oldenburg, Thomas, Pagé, Antoine P, Ramos-Padron, Esther, Rochman, Fauziah F, Saidi-Mehrabad, Alireeza, Sensen, Christoph W, Sipahimalani, Payal, Song, Young C, Wilson, Sandra, Wolbring, Gregor, Wong, Man-Ling, Voordouw, Gerrit

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Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean von Allers, Elke, Wright, Jody J, Konwar, Kishori M, Howes, Charles G, Beneze, Erica, Hallam, Steven J, Sullivan, Matthew B

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MetaPathways v2.5: quantitative functional, taxonomic and usability improvements von Konwar, Kishori M, Hanson, Niels W, Bhatia, Maya P, Kim, Dongjae, Wu, Shang-Ju, Hahn, Aria S, Morgan-Lang, Connor, Cheung, Hiu Kan, Hallam, Steven J

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The information science of microbial ecology von Hahn, Aria S, Konwar, Kishori M, Louca, Stilianos, Hanson, Niels W, Hallam, Steven J

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A Locally Stationary Markov Chain Model for Labor Dynamics von Alvarez, Enrique E., Ciocchini, Francisco J., Konwar, Kishori

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Dealing with undependable workers in decentralized network supercomputing von Davtyan, Seda, Konwar, Kishori M., Russell, Alexander, Shvartsman, Alexander A.

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Robust network supercomputing with unreliable workers von Konwar, Kishori M., Rajasekaran, Sanguthevar, Shvartsman, Alexander A.

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Pathway-Centric Analysis of Microbial Metabolic Potential and Expression Along Nutrient and Energy Gradients in the Western Atlantic Ocean von Cavaco, Maria A., Bhatia, Maya P., Hawley, Alyse K., Torres-Beltrán, Monica, Johnson, Winifred M., Longnecker, Krista, Konwar, Kishori, Kujawinski, Elizabeth B., Hallam, Steven J.

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A geographically-diverse collection of 418 human gut microbiome pathway genome databases von Hahn, Aria S., Altman, Tomer, Konwar, Kishori M., Hanson, Niels W., Kim, Dongjae, Relman, David A., Dill, David L., Hallam, Steven J.

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Fuzzy decision tree, linguistic rules and fuzzy knowledge-based network: generation and evaluation von Mitra, S., Konwar, K.M., Pal, S.K.

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