Systems Biology in Practice: Concepts, Implementation and Application von Klipp, Edda, Herwig, Ralf, Kowald, Axel, Lehrach, Hans, Wierling, Christoph

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Selective benefits of damage partitioning in unicellular systems and its effects on aging von Erjavec, N, Cvijovic, M, Klipp, E, Nyström, T

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Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems von Raue, A, Steiert, B, Schelker, M, Kreutz, C, Maiwald, T, Hass, H, Vanlier, J, Tönsing, C, Adlung, L, Engesser, R, Mader, W, Heinemann, T, Hasenauer, J, Schilling, M, Höfer, T, Klipp, E, Theis, F, Klingmüller, U, Schöberl, B, Timmer, J

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Modeling mechanistic biological networks: An advanced Boolean approach von Handorf, T., Klipp, E.

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Superoxide production by cytochrome bc1 complex: A mathematical model von Guillaud, F., Dröse, S., Kowald, A., Brandt, U., Klipp, E.

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model for the spatiotemporal organization of DNA replication in Saccharomyces cerevisiae von Spiesser, T. W, Klipp, E, Barberis, Matteo

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Integrative model of the response of yeast to osmotic shock von Klipp, E, Nordlander, B, Kruger, R, Gennemark, P, Hohmann, S

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Minimum information requested in the annotation of biochemical models (MIRIAM) von Bhalla, Upinder S, Nielsen, Poul, Novère, Nicolas Le, Wanner, Barry L, Klipp, Edda, Spence, Hugh D, Sauro, Herbert, Shapiro, Bruce, Hucka, Michael, Snoep, Jacky L, Campagne, Fabien, Collado-Vides, Julio, Mendes, Pedro, Crampin, Edmund J, Halstead, Matt, Finney, Andrew

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Dissecting the energy metabolism in Mycoplasma pneumoniae through genome‐scale metabolic modeling von Wodke, Judith A H, Puchałka, Jacek, Lluch‐Senar, Maria, Marcos, Josep, Yus, Eva, Godinho, Miguel, Gutiérrez‐Gallego, Ricardo, dos Santos, Vitor A P Martins, Serrano, Luis, Klipp, Edda, Maier, Tobias

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Modelling the dynamics of the yeast pheromone pathway von Kofahl, Bente, Klipp, Edda

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Glucose de‐repression by yeast AMP‐activated protein kinase SNF1 is controlled via at least two independent steps von García‐Salcedo, Raúl, Lubitz, Timo, Beltran, Gemma, Elbing, Karin, Tian, Ye, Frey, Simone, Wolkenhauer, Olaf, Krantz, Marcus, Klipp, Edda, Hohmann, Stefan

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Biophysical properties of Saccharomyces cerevisiae and their relationship with HOG pathway activation von Schaber, Jörg, Adrover, Miquel Àngel, Eriksson, Emma, Pelet, Serge, Petelenz-Kurdziel, Elzbieta, Klein, Dagmara, Posas, Francesc, Goksör, Mattias, Peter, Mathias, Hohmann, Stefan, Klipp, Edda

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Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis von Nicolas, Pierre, Mäder, Ulrike, Dervyn, Etienne, Rochat, Tatiana, Leduc, Aurélie, Pigeonneau, Nathalie, Bidnenko, Elena, Marchadier, Elodie, Hoebeke, Mark, Aymerich, Stéphane, Becher, Dörte, Bisicchia, Paola, Botella, Eric, Delumeau, Olivier, Doherty, Geoff, Denham, Emma L., Fogg, Mark J., Fromion, Vincent, Goelzer, Anne, Hansen, Annette, Härtig, Elisabeth, Harwood, Colin R., Homuth, Georg, Jarmer, Hanne, Jules, Matthieu, Klipp, Edda, Le Chat, Ludovic, Lecointe, François, Lewis, Peter, Liebermeister, Wolfram, March, Anika, Mars, Ruben A. T., Nannapaneni, Priyanka, Noone, David, Pohl, Susanne, Rinn, Bernd, Rügheimer, Frank, Sappa, Praveen K., Samson, Franck, Schaffer, Marc, Schwikowski, Benno, Steil, Leif, Stülke, Jörg, Wiegert, Thomas, Devine, Kevin M., Wilkinson, Anthony J., van Dijl, Jan Maarten, Hecker, Michael, Völker, Uwe, Bessières, Philippe, Noirot, Philippe

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Biochemical network models simplified by balanced truncation von Liebermeister, Wolfram, Baur, Ulrike, Klipp, Edda

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Bridging the gaps in systems biology von Cvijovic, Marija, Almquist, Joachim, Hagmar, Jonas, Hohmann, Stefan, Kaltenbach, Hans-Michael, Klipp, Edda, Krantz, Marcus, Mendes, Pedro, Nelander, Sven, Nielsen, Jens, Pagnani, Andrea, Przulj, Natasa, Raue, Andreas, Stelling, Jörg, Stoma, Szymon, Tobin, Frank, Wodke, Judith A. H, Zecchina, Riccardo, Jirstrand, Mats

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Alternative pathways as mechanism for the negative effects associated with overexpression of superoxide dismutase von Kowald, Axel, Lehrach, Hans, Klipp, Edda

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Dynamic Modeling of Cellular Stress Response von Klipp, E.

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Interaction Dynamics Determine Signaling and Output Pathway Responses von Stojanovski, Klement, Ferrar, Tony, Benisty, Hannah, 1986, Uschner, Friedemann, Delgado Blanco, Javier, Jimenez, Javier, Solé, Carme, Nadal Clanchet, Eulàlia de, Klipp, E., 1965, Posas Garriga, Francesc, Serrano Pubull, Luis, 1982, Kiel, Christina

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Alternative Pathways Might Mediate Toxicity of High Concentrations of Superoxide Dismutase von KOWALD, AXEL, KLIPP, EDDA

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Drug-efficacy depends on the inhibitor type and the target position in a metabolic network—A systematic study von Gerber, Susanne, Aßmus, Heike, Bakker, Barbara, Klipp, Edda

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