iTools: a framework for classification, categorization and integration of computational biology resources von Dinov, Ivo D, Rubin, Daniel, Lorensen, William, Dugan, Jonathan, Ma, Jeff, Murphy, Shawn, Kirschner, Beth, Bug, William, Sherman, Michael, Floratos, Aris, Kennedy, David, Jagadish, H V, Schmidt, Jeanette, Athey, Brian, Califano, Andrea, Musen, Mark, Altman, Russ, Kikinis, Ron, Kohane, Isaac, Delp, Scott, Parker, D Stott, Toga, Arthur W

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The Biomedical Resource Ontology (BRO) to enable resource discovery in clinical and translational research von Tenenbaum, Jessica D., Whetzel, Patricia L., Anderson, Kent, Borromeo, Charles D., Dinov, Ivo D., Gabriel, Davera, Kirschner, Beth, Mirel, Barbara, Morris, Tim, Noy, Natasha, Nyulas, Csongor, Rubenson, David, Saxman, Paul R., Singh, Harpreet, Whelan, Nancy, Wright, Zach, Athey, Brian D., Becich, Michael J., Ginsburg, Geoffrey S., Musen, Mark A., Smith, Kevin A., Tarantal, Alice F., Rubin, Daniel L., Lyster, Peter

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Using the Sakai collaborative toolkit in e-Research applications von Severance, Charles, Hardin, Joseph, Golden, Glenn, Crouchley, Robert, Fish, Adrian, Finholt, Tom, Kirschner, Beth, Eng, Jim, Allan, Rob

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Walden: A Scalable Solution for Grid Account Management von Kirschner, Beth A., Hacker, Thomas J., Adamson, William A., Athey, Brian D.

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Vulnerable Child Syndrome and Newborn Screening Carrier Results for Cystic Fibrosis or Sickle Cell von Farrell, Michael H., Sims, Alexandra M., La Pean Kirschner, Alison, Farrell, Philip M., Tarini, Beth A.

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The Amazon rain forest plant Uncaria tomentosa (cat’s claw) and its specific proanthocyanidin constituents are potent inhibitors and reducers of both brain plaques and tangles von Snow, Alan D., Castillo, Gerardo M., Nguyen, Beth P., Choi, Paula Y., Cummings, Joel A., Cam, Judy, Hu, Qubai, Lake, Thomas, Pan, Weihong, Kastin, Abba J., Kirschner, Daniel A., Wood, Steven G., Rockenstein, Edward, Masliah, Eliezer, Lorimer, Stephen, Tanzi, Rudolph E., Larsen, Lesley

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What Does It Mean to Say Science Is Gendered? von Kirschner, Suzanne R.

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Global Search for Minimum Energy (H2O) n Clusters, n = 3−5 von Day, Mary Beth, Kirschner, Karl N, Shields, George C

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Anterior Colporrhaphy versus Transvaginal Mesh for Pelvic-Organ Prolapse von Altman, Daniel, Väyrynen, Tapio, Engh, Marie Ellström, Axelsen, Susanne, Falconer, Christian

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Toward mechanistic medical digital twins: some use cases in immunology von Laubenbacher, Reinhard, Adler, Fred, An, Gary, Castiglione, Filippo, Eubank, Stephen, Fonseca, Luis L, Glazier, James, Helikar, Tomas, Jett-Tilton, Marti, Kirschner, Denise, Macklin, Paul, Mehrad, Borna, Moore, Beth, Pasour, Virginia, Shmulevich, Ilya, Smith, Amber, Voigt, Isabel, Yankeelov, Thomas E, Ziemssen, Tjalf

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Simian Immunodeficiency Virus Infection Potently Modulates Chemokine Networks and Immune Environments in Hilar Lymph Nodes of Cynomolgus Macaques von Qin, Shulin, Junecko, Beth A.F, Lucero, Carissa M, Klamar, Cynthia R, Trichel, Anita M, Murphey-Corb, Michael A, Tarwater, Patrick M, Kirschner, Denise E, Reinhart, Todd A

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Forum on immune digital twins: a meeting report von Laubenbacher, Reinhard, Adler, Fred, An, Gary, Castiglione, Filippo, Eubank, Stephen, Fonseca, Luis L., Glazier, James, Helikar, Tomas, Jett-Tilton, Marti, Kirschner, Denise, Macklin, Paul, Mehrad, Borna, Moore, Beth, Pasour, Virginia, Shmulevich, Ilya, Smith, Amber, Voigt, Isabel, Yankeelov, Thomas E., Ziemssen, Tjalf

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The dual role of dendritic cells in the immune response to human immunodeficiency virus type 1 infection von Hogue, Ian B, Bajaria, Seema H, Fallert, Beth A, Qin, Shulin, Reinhart, Todd A, Kirschner, Denise E

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Chemokine and Cytokine Mediated Loss of Regulatory T Cells in Lymph Nodes during Pathogenic Simian Immunodeficiency Virus Infection von Qin, Shulin, Sui, Yongjun, Soloff, Adam C, Fallert Junecko, Beth A, Kirschner, Denise E, Murphey-Corb, Michael A, Watkins, Simon C, Tarwater, Patrick M, Pease, James E, Barratt-Boyes, Simon M, Reinhart, Todd A

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Simian Immunodeficiency Virus Infection Alters Chemokine Networks in Lung Tissues of Cynomolgus Macaques: Association with Pneumocystis carinii Infection von SHULIN QIN, FALLERT JUNECKO, Beth A, TRICHEL, Anita M, TARWATER, Patrick M, MURPHEY-CORB, Michael A, KIRSCHNER, Denise E, REINHART, Todd A

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Pople's Gaussian-3 model chemistry applied to an investigation of (H2O)8 water clusters von Day, Mary Beth, Kirschner, Karl N., Shields, George C.

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Vesicant IV Therapies and Peripheral IV Integrity von Walker, Beth, Kirschner, Robin

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Simian Immunodeficiency Virus Infection Alters Chemokine Networks in Lung Tissues of Cynomolgus Macaques von Qin, Shulin, Fallert Junecko, Beth A, Trichel, Anita M, Tarwater, Patrick M, Murphey-Corb, Michael A, Kirschner, Denise E, Reinhart, Todd A

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Virologic and Immunologic Events in Hilar Lymph Nodes During Simian Immunodeficiency Virus Infection: Development of Polarized Inflammation von Fallert, Beth A, Poveda, Sandra, Schaefer, Todd M, Pfeifer, Melanie E, Sanghavi, Sonali K, Watkins, Simon C, Murphey-Corb, Michael A, Tarwater, Patrick M, Kirschner, Denise E, Reinhart, Todd A

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Increased expression of interferon-inducible genes in macaque lung tissues during simian immunodeficiency virus infection von Schaefer, Todd M., Fuller, Craig L., Basu, Shrabani, Fallert, Beth A., Poveda, Sandra L., Sanghavi, Sonali K., Choi, Yang-Kyu, Kirschner, Denise E., Feingold, Eleanor, Reinhart, Todd A.

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