A fast structural multiple alignment method for long RNA sequences von Tabei, Yasuo, Kiryu, Hisanori, Kin, Taishin, Asai, Kiyoshi

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Idiographica: a general-purpose web application to build idiograms on-demand for human, mouse and rat von Kin, Taishin, Ono, Yukiteru

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fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences von Taishin Kin, Yamada, Kouichirou, Terai, Goro, Okida, Hiroaki, Yoshinari, Yasuhiko, Ono, Yukiteru, Kojima, Aya, Kimura, Yuki, Komori, Takashi, Asai, Kiyoshi

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Murlet: a practical multiple alignment tool for structural RNA sequences von Kiryu, Hisanori, Tabei, Yasuo, Kin, Taishin, Asai, Kiyoshi

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Rfold: an exact algorithm for computing local base pairing probabilities von Kiryu, Hisanori, Kin, Taishin, Asai, Kiyoshi

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Robust prediction of consensus secondary structures using averaged base pairing probability matrices von Kiryu, Hisanori, Kin, Taishin, Asai, Kiyoshi

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SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments von Tabei, Yasuo, Tsuda, Koji, Kin, Taishin, Asai, Kiyoshi

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Marginalized kernels for biological sequences von Tsuda, Koji, Kin, Taishin, Asai, Kiyoshi

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Mining frequent stem patterns from unaligned RNA sequences von Hamada, Michiaki, Tsuda, Koji, Kudo, Taku, Kin, Taishin, Asai, Kiyoshi

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Coordinated expression of ncRNAs and HOX mRNAs in the human HOXA locus von Sasaki, Yasnory T.F., Sano, Miho, Kin, Taishin, Asai, Kiyoshi, Hirose, Tetsuro

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Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells von Kawamura, Yoshinori, Saito, Kuniaki, Kin, Taishin, Ono, Yukiteru, Asai, Kiyoshi, Sunohara, Takafumi, Okada, Tomoko N, Siomi, Mikiko C, Siomi, Huruhiko

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Genome sequencing and analysis of Aspergillus oryzae von Machida, M, Asai, K, Sano, M, Tanaka, T, Kumagai, T, Terai, G, Kusumoto, K, Arima, T, Akita, O, Kashiwagi, Y, Yu, J, Bhatnagar, D, Cleveland, T.E

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miRRim: a novel system to find conserved miRNAs with high sensitivity and specificity von Terai, Goro, Komori, Takashi, Asai, Kiyoshi, Kin, Taishin

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fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences von Kin, Taishin, Yamada, Kouichirou, Terai, Goro, Okida, Hiroaki, Yoshinari, Yasuhiko, Ono, Yukiteru, Kojima, Aya, Kimura, Yuki, Komori, Takashi, Asai, Kiyoshi

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Marginalized Kernels for RNA Sequence Data Analysis von Kin, Taishin, Tsuda, Koji, Asai, Kiyoshi

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Identification and characterization of human non-coding RNAs with tissue-specific expression von Sasaki, Yasnory T.F., Sano, Miho, Ideue, Takashi, Kin, Taishin, Asai, Kiyoshi, Hirose, Tetsuro

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Protein Classification via Kernel Matrix Completion von Kin, Taishin, Kato, Tsuyoshi, Tsuda, Koji, Asai, Kiyoshi

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Minimizing the cross validation error to mix kernel matrices of heterogeneous biological data von TSUDA, Koji, UDA, Shinsuke, KIN, Taishin, ASAL, Kiyoshi

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Genome sequencing and analysis of Aspergillus oryzae von Machida, Masayuki, Asai, Kiyoshi, Sano, Motoaki, Tanaka, Toshihiro, Kumagai, Toshitaka, Terai, Goro, Kusumoto, Ken Ichi, Arima, Toshihide, Akita, Osamu, Kashiwagi, Yutaka, Abe, Keietsu, Gomi, Katsuya, Horiuchi, Hiroyuki, Kitamoto, Katsuhiko, Kobayashi, Tetsuo, Takeuchi, Michio, Denning, David W, Galagan, James E, Nierman, William C, Yu, Jiujiang, Archer, David B, Bennett, Joan W, Bhatnagar, Deepak, Cleveland, Thomas E, Fedorova, Natalie D, Gotoh, Osamu, Horikawa, Hiroshi, Hosoyama, Akira, Ichinomiya, Masayuki, Igarashi, Rie, Iwashita, Kazuhiro, Juvvadi, Praveen Rao, Kato, Masashi, Kato, Yumiko, Kin, Taishin, Kokubun, Akira, Maeda, Hiroshi, Maeyama, Noriko, Maruyama, Jun Ichi, Nagasaki, Hideki, Nakajima, Tasuku, Oda, Ken, Okada, Kinya, Paulsen, Ian, Sakamoto, Kazutoshi, Sawano, Toshihiko, Takahashi, Mikio, Takase, Kumiko, Terabayashi, Yasunobu, Wortman, Jennifer R, Yamada, Osamu, Yamagata, Youhei, Anazawa, Hideharu, Hata, Yoji, Koide, Yoshinao, Komori, Takashi, Koyama, Yasuji, Minetoki, Toshitaka, Suharnan, Sivasundaram, Tanaka, Akimitsu, Isono, Katsumi, Kuhara, Satoru, Ogasawara, Naotake, Kikuchi, Hisashi

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KOJI MOLD-ORIGIN PHOSPHOLIPASE A SB 2 /SB von OGASAWARA, NAOTAKE, SANO, MOTOAKI, ASAI, KIYOSHI, HISAHARA, SATORU, YAMAGUCHI, SHOTARO, NAGASAKI, HIDEKI, MACHIDA, MASAYUKI, HOSOYAMA, AKIRA, AKITA, OSAMU, ABE, KEIETSU, KITAMOTO, KATSUHIKO, ARIOKA, MANABU, KIN, TAISHIN, GOMI, KATSUYA

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