Aberrant RNA splicing in cancer; expression changes and driver mutations of splicing factor genes von Sveen, A, Kilpinen, S, Ruusulehto, A, Lothe, R A, Skotheim, R I

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Menetrier-like disease in a Pointer with concurrent granulomatous gastritis, helicobacteriosis and leishmaniosis: a case report von Lagerstedt, E., Spillmann, T., Airas, N., Solano-Gallego, L., Kilpinen, S.

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Non-tuberculous Mycobacteria can Cause Disseminated Mycobacteriosis in Cats von Pekkarinen, H., Airas, N., Savolainen, L.E., Rantala, M., Kilpinen, S., Miuku, O., Speeti, M., Karkamo, V., Malkamäki, S., Vaara, M., Sukura, A., Syrjä, P.

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Damaging heterozygous mutations in NFKB1 lead to diverse immunologic phenotypes von Kaustio, Meri, MSc, Haapaniemi, Emma, MD, PhD, Göös, Helka, MSc, Hautala, Timo, MD, PhD, Park, Giljun, PhD, Syrjänen, Jaana, MD, PhD, Einarsdottir, Elisabet, PhD, Sahu, Biswajyoti, PhD, Kilpinen, Sanna, MD, PhD, Rounioja, Samuli, MD, PhD, Fogarty, Christopher L., MSc, Glumoff, Virpi, PhD, Kulmala, Petri, MD, PhD, Katayama, Shintaro, PhD, Tamene, Fitsum, MSc, Trotta, Luca, MSc, Morgunova, Ekaterina, PhD, Krjutškov, Kaarel, PhD, Nurmi, Katariina, PhD, Eklund, Kari, MD, PhD, Lagerstedt, Anssi, MD, PhD, Helminen, Merja, MD, PhD, Martelius, Timi, MD, PhD, Mustjoki, Satu, MD, PhD, Taipale, Jussi, PhD, Saarela, Janna, MD, PhD, Kere, Juha, MD, PhD, Varjosalo, Markku, PhD, Seppänen, Mikko, MD, PhD

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Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression von Cuomo, Anna S. E., Seaton, Daniel D., McCarthy, Davis J., Martinez, Iker, Bonder, Marc Jan, Garcia-Bernardo, Jose, Amatya, Shradha, Madrigal, Pedro, Isaacson, Abigail, Buettner, Florian, Knights, Andrew, Natarajan, Kedar Nath, Vallier, Ludovic, Marioni, John C., Chhatriwala, Mariya, Stegle, Oliver

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Gata2, Nkx2-2 and Skor2 form a transcription factor network regulating development of a midbrain GABAergic neuron subtype with characteristics of REM-sleep regulatory neurons von Kirjavainen, Anna, Singh, Parul, Lahti, Laura, Seja, Patricia, Lelkes, Zoltan, Makkonen, Aki, Kilpinen, Sami, Ono, Yuichi, Salminen, Marjo, Aitta-Aho, Teemu, Stenberg, Tarja, Molchanova, Svetlana, Achim, Kaia, Partanen, Juha

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SATB2 in Combination With Cytokeratin 20 Identifies Over 95% of all Colorectal Carcinomas von MAGNUSSON, Kristina, DE WIT, Meike, WESTER, Kenneth, GRY, Marcus, BJARTELL, Anders, GALLAGHER, William M, REXHEPAJ, Elton, KILPINEN, Sami, KALLIONIEMI, Olli-Pekka, BELT, Eric, GOOS, Jeroen, MEIJER, Gerrit, BRENNAN, Donal J, BIRGISSON, Helgi, GLIMELIUS, Bengt, BORREBAECK, Carl A. K, NAVANI, Sanjay, UHLEN, Mathias, O'CONNOR, Darran P, JIRSTRÖM, Karin, PONTEN, Fredrik, JOHNSON, Louis B, MCGEE, Sharon F, LUNDBERG, Emma, NAICKER, Kirsha, KLINGER, Rut, KAMPF, Caroline, ASPLUND, Anna

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Application of Active and Kinase-Deficient Kinome Collection for Identification of Kinases Regulating Hedgehog Signaling von Varjosalo, Markku, Björklund, Mikael, Cheng, Fang, Syvänen, Heidi, Kivioja, Teemu, Kilpinen, Sami, Sun, Zairen, Kallioniemi, Olli, Stunnenberg, Hendrik G., He, Wei-Wu, Ojala, Päivi, Taipale, Jussi

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Genomic basis for RNA alterations in cancer von Calabrese, Claudia, Davidson, Natalie R., Demircioğlu, Deniz, Fonseca, Nuno A., He, Yao, Kahles, André, Lehmann, Kjong-Van, Liu, Fenglin, Shiraishi, Yuichi, Soulette, Cameron M., Urban, Lara, Greger, Liliana, Li, Siliang, Liu, Dongbing, Perry, Marc D., Xiang, Qian, Zhang, Fan, Zhang, Junjun, Bailey, Peter, Erkek, Serap, Hoadley, Katherine A., Hou, Yong, Huska, Matthew R., Kilpinen, Helena, Korbel, Jan O., Marin, Maximillian G., Markowski, Julia, Nandi, Tannistha, Pan-Hammarström, Qiang, Pedamallu, Chandra Sekhar, Siebert, Reiner, Stark, Stefan G., Su, Hong, Tan, Patrick, Waszak, Sebastian M., Yung, Christina, Zhu, Shida, Awadalla, Philip, Creighton, Chad J., Meyerson, Matthew, Ouellette, B. F. Francis, Wu, Kui, Yang, Huanming, Brazma, Alvis, Brooks, Angela N., Göke, Jonathan, Rätsch, Gunnar, Schwarz, Roland F., Stegle, Oliver, Zhang, Zemin

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IL-10 gene polymorphism and herpesvirus infections von Hurme, M., Haanpää, M., Nurmikko, T., Wang, X.-Y., Virta, M., Pessi, T., Kilpinen, S., Hulkkonen, J., Helminen, M.

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Timing, rates and spectra of human germline mutation von Rahbari, Raheleh, Wuster, Arthur, Lindsay, Sarah J, Hardwick, Robert J, Alexandrov, Ludmil B, Al Turki, Saeed, Dominiczak, Anna, Morris, Andrew, Porteous, David, Smith, Blair, Stratton, Michael R, Hurles, Matthew E

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Population-scale proteome variation in human induced pluripotent stem cells von Mirauta, Bogdan Andrei, Seaton, Daniel D., Bensaddek, Dalila, Brenes, Alejandro, Bonder, Marc Jan, Kilpinen, Helena, Stegle, Oliver, Lamond, Angus

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Cardelino: computational integration of somatic clonal substructure and single-cell transcriptomes von McCarthy, Davis J., Rostom, Raghd, Huang, Yuanhua, Kunz, Daniel J., Danecek, Petr, Bonder, Marc Jan, Hagai, Tzachi, Lyu, Ruqian, Wang, Wenyi, Gaffney, Daniel J., Simons, Benjamin D., Stegle, Oliver, Teichmann, Sarah A.

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Immunoglobulin G3 and Immunoglobulin M Isotype Plasma Levels are Influenced by Interleukin‐1α Genotype von Kilpinen, S., Laine, S., Hulkkonen, J., Hurme, M.

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Low CD3+CD28‐induced interleukin‐2 production correlates with decreased reactive oxygen intermediate formation in neonatal T cells von Kilpinen, S., Hurme, M.

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Fibroblast Growth Factor Receptor 4 Regulates Tumor Invasion by Coupling Fibroblast Growth Factor Signaling to Extracellular Matrix Degradation von SUGIYAMA, Nami, VARJOSALO, Markku, ALITALO, Kari, KESKI-OJA, Jorma, LEHTI, Kaisa, MELLER, Pipsa, LOHI, Jouko, HYYTIÄINEN, Marko, KILPINEN, Sami, KALLIONIEMI, Olli, INGVARSEN, Signe, ENGELHOLM, Lars H, TAIPALE, Jussi

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Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories von 't Hoen, Peter A C, Friedländer, Marc R, Almlöf, Jonas, Sammeth, Michael, Pulyakhina, Irina, Anvar, Seyed Yahya, Laros, Jeroen F J, Buermans, Henk P J, Karlberg, Olof, Brännvall, Mathias, den Dunnen, Johan T, van Ommen, Gert-Jan B, Gut, Ivo G, Guigó, Roderic, Estivill, Xavier, Syvänen, Ann-Christine, Dermitzakis, Emmanouil T, Lappalainen, Tuuli

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High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations von Zhang, Yiqun, Chen, Fengju, Fonseca, Nuno A., He, Yao, Fujita, Masashi, Nakagawa, Hidewaki, Zhang, Zemin, Brazma, Alvis, Creighton, Chad J.

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Publisher Correction: Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression von Cuomo, Anna S. E., Seaton, Daniel D., McCarthy, Davis J., Martinez, Iker, Bonder, Marc Jan, Garcia-Bernardo, Jose, Amatya, Shradha, Madrigal, Pedro, Isaacson, Abigail, Buettner, Florian, Knights, Andrew, Natarajan, Kedar Nath, Vallier, Ludovic, Marioni, John C., Chhatriwala, Mariya, Stegle, Oliver

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Dominant NFKB1 Mutations Cause Antibody Deficiency and Autoinflammatory Episodes von Haapaniemi, Emma M, Kaustio, Meri, Nurkkala, Helka, Helminen, Merja, Mustjoki, Satu, Elisabet, Einarsdottir, Biswajyoti, Sahu, Kilpinen, Sanna, Syrjänen, Jaana, Rounioja, Samuli, Fogarty, Christopher, Glumoff, Virpi, Kulmala, Petri, Katayama, Shintaro, Tamene, Fitsum, Martelius, Timi, Trotta, Luca, Morungova, Ekaterina, Taipale, Jussi, Saarela, Janna, Kere, Juha, Varjosalo, Markku, Seppänen, Mikko

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