Mass Spectrometry Profiling of HLA-Associated Peptidomes in Mono-allelic Cells Enables More Accurate Epitope Prediction von Abelin, Jennifer G., Keskin, Derin B., Sarkizova, Siranush, Hartigan, Christina R., Zhang, Wandi, Sidney, John, Stevens, Jonathan, Lane, William, Zhang, Guang Lan, Eisenhaure, Thomas M., Clauser, Karl R., Hacohen, Nir, Rooney, Michael S., Carr, Steven A., Wu, Catherine J.

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TANTIGEN 2.0: a knowledge base of tumor T cell antigens and epitopes von Zhang, Guanglan, Chitkushev, Lou, Olsen, Lars Rønn, Keskin, Derin B, Brusic, Vladimir

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Force-dependent transition in the T-cell receptor β-subunit allosterically regulates peptide discrimination and pMHC bond lifetime von Das, Dibyendu Kumar, Feng, Yinnian, Mallis, Robert J., Li, Xiaolong, Keskin, Derin B., Hussey, Rebecca E., Brady, Sonia K., Wang, Jia-Huai, Wagner, Gerhard, Reinherz, Ellis L., Lang, Matthew J.

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Systematic identification of personal tumor-specific neoantigens in chronic lymphocytic leukemia von Rajasagi, Mohini, Shukla, Sachet A., Fritsch, Edward F., Keskin, Derin B., DeLuca, David, Carmona, Ellese, Zhang, Wandi, Sougnez, Carrie, Cibulskis, Kristian, Sidney, John, Stevenson, Kristen, Ritz, Jerome, Neuberg, Donna, Brusic, Vladimir, Gabriel, Stacey, Lander, Eric S., Getz, Gad, Hacohen, Nir, Wu, Catherine J.

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Developmental Bias in Cleavage-Stage Mouse Blastomeres von Tabansky, Inna, Lenarcic, Alan, Draft, Ryan W., Loulier, Karine, Keskin, Derin B., Rosains, Jacqueline, Rivera-Feliciano, José, Lichtman, Jeff W., Livet, Jean, Stern, Joel N.H., Sanes, Joshua R., Eggan, Kevin

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Lynch syndrome cancer vaccines: A roadmap for the development of precision immunoprevention strategies von Sei, Shizuko, Ahadova, Aysel, Keskin, Derin B, Bohaumilitzky, Lena, Gebert, Johannes, von Knebel Doeberitz, Magnus, Lipkin, Steven M, Kloor, Matthias

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Acquired mechanisms of immune escape in cancer following immunotherapy von Iorgulescu, J Bryan, Braun, David, Oliveira, Giacomo, Keskin, Derin B, Wu, Catherine J

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YAP1 and WWTR1 expression inversely correlates with neuroendocrine markers in Merkel cell carcinoma von Frost, Thomas C, Gartin, Ashley K, Liu, Mofei, Cheng, Jingwei, Dharaneeswaran, Harita, Keskin, Derin B, Wu, Catherine J, Giobbie-Hurder, Anita, Thakuria, Manisha, DeCaprio, James A

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A review of the current use of rituximab in autoimmune diseases von Gürcan, Hakan M., Keskin, Derin B., Stern, Joel N.H., Nitzberg, Matthew A., Shekhani, Haris, Ahmed, A. Razzaque

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TGFβ promotes conversion of CD16⁺ peripheral blood NK cells into CD16⁻ NK cells with similarities to decidual NK cells von Keskin, Derin B, Allan, David S.J, Rybalov, Basya, Andzelm, Milena M, Stern, Joel N.H, Kopcow, Hernan D, Koopman, Louise A, Strominger, Jack L

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Physical detection of influenza A epitopes identifies a stealth subset on human lung epithelium evading natural CD8 immunity von Keskin, Derin B., Reinhold, Bruce B., Lan Zhang, Guang, Ivanov, Alexander R., Karger, Barry L., Reinherz, Ellis L.

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Targeting DEC-205 - DCIR2 + dendritic cells promotes immunological tolerance in proteolipid protein-induced experimental autoimmune encephalomyelitis von Tabansky, Inna, Keskin, Derin B, Watts, Deepika, Petzold, Cathleen, Funaro, Michael, Sands, Warren, Wright, Paul, Yunis, Edmond J, Najjar, Souhel, Diamond, Betty, Cao, Yonghao, Mooney, David, Kretschmer, Karsten, Stern, Joel N H

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Applying high-dimensional single-cell technologies to the analysis of cancer immunotherapy von Gohil, Satyen H., Iorgulescu, J. Bryan, Braun, David A., Keskin, Derin B., Livak, Kenneth J.

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Integrated Immunopeptidomic and Proteomic Analysis of COVID-19 lung biopsies von Yin, Shanye, Klaeger, Susan, Chea, Vipheaviny A, Carulli, Isabel P, Rachimi, Suzanna, Black, Katharine E, Filbin, Michael, Hariri, Lida P, Knipe, Rachel S, Padera, Robert F, Stevens, Jonathan D, Lane, William J, Carr, Steven A, Wu, Catherine J, Kim, Edy Yong, Keskin, Derin B

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Mapping the evolution of T cell states during response and resistance to adoptive cellular therapy von Bachireddy, Pavan, Azizi, Elham, Burdziak, Cassandra, Nguyen, Vinhkhang N., Ennis, Christina S., Maurer, Katie, Park, Cameron Y., Choo, Zi-Ning, Li, Shuqiang, Gohil, Satyen H., Ruthen, Neil G., Ge, Zhongqi, Keskin, Derin B., Cieri, Nicoletta, Livak, Kenneth J., Kim, Haesook T., Neuberg, Donna S., Soiffer, Robert J., Ritz, Jerome, Alyea, Edwin P., Pe’er, Dana, Wu, Catherine J.

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Bioinformatic identification and characterization of human endothelial cell-restricted genes von Bhasin, Manoj, Yuan, Lei, Keskin, Derin B, Otu, Hasan H, Libermann, Towia A, Oettgen, Peter

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Potential Regulatory Function of Human Dendritic Cells Expressing Indoleamine 2,3-Dioxygenase von Munn, David H., Sharma, Madhav D., Lee, Jeffrey R., Jhaver, Kanchan G., Johnson, Theodore S., Keskin, Derin B., Marshall, Brendan, Chandler, Phillip, Antonia, Scott J., Burgess, Russell, Slingluff, Craig L., Mellor, Andrew L.

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Dictionary of immune responses to cytokines at single-cell resolution von Cui, Ang, Huang, Teddy, Li, Shuqiang, Ma, Aileen, Pérez, Jorge L., Sander, Chris, Keskin, Derin B., Wu, Catherine J., Fraenkel, Ernest, Hacohen, Nir

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Rare variants and HLA haplotypes associated in patients with neuromyelitis optica spectrum disorders von Tabansky, Inna, Tanaka, Akemi J., Wang, Jiayao, Zhang, Guanglan, Dujmovic, Irena, Mader, Simone, Jeganathan, Venkatesh, DeAngelis, Tracey, Funaro, Michael, Harel, Asaff, Messina, Mark, Shabbir, Maya, Nursey, Vishaan, DeGouvia, William, Laurent, Micheline, Blitz, Karen, Jindra, Peter, Gudesblatt, Mark, King, Alejandra, Drulovic, Jelena, Yunis, Edmond, Brusic, Vladimir, Shen, Yufeng, Keskin, Derin B., Najjar, Souhel, Stern, Joel N. H.

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Phenotype, specificity and avidity of antitumour CD8+ T cells in melanoma von Oliveira, Giacomo, Stromhaug, Kari, Klaeger, Susan, Kula, Tomasz, Frederick, Dennie T., Le, Phuong M., Forman, Juliet, Huang, Teddy, Li, Shuqiang, Zhang, Wandi, Xu, Qikai, Cieri, Nicoletta, Clauser, Karl R., Shukla, Sachet A., Neuberg, Donna, Justesen, Sune, MacBeath, Gavin, Carr, Steven A., Fritsch, Edward F., Hacohen, Nir, Sade-Feldman, Moshe, Livak, Kenneth J., Boland, Genevieve M., Ott, Patrick A., Keskin, Derin B., Wu, Catherine J.

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