Molecular Dynamics–Markov State Model of Protein Ligand Binding and Allostery in CRIB-PDZ: Conformational Selection and Induced Fit von Thayer, Kelly M, Lakhani, Bharat, Beveridge, David L

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GNN Codon Adjacency Tunes Protein Translation von Sun, Joyce, Hwang, Pete, Sakkas, Eric D, Zhou, Yancheng, Perez, Luis, Dave, Ishani, Kwon, Jack B, McMahon, Audrey E, Wichman, Mia, Raval, Mitsu, Scopino, Kristen, Krizanc, Daniel, Thayer, Kelly M, Weir, Michael P

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Arginine Methylation Regulates Ribosome CAR Function von Scopino, Kristen, Dalgarno, Carol, Nachmanoff, Clara, Krizanc, Daniel, Thayer, Kelly M, Weir, Michael P

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Reconnaissance of Allostery via the Restoration of Native p53 DNA-Binding Domain Dynamics in Y220C Mutant p53 Tumor Suppressor Protein von Han, In Sub M., Thayer, Kelly M.

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Energetic Landscape of MDM2-p53 Interactions by Computational Mutagenesis of the MDM2-p53 Interaction von Thayer, Kelly M, Beyer, George A

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Dependence of prevalence of contiguous pathways in proteins on structural complexity von Thayer, Kelly M, Galganov, Jesse C, Stein, Avram J

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GCN sensitive protein translation in yeast von Barr, William A, Sheth, Ruchi B, Kwon, Jack, Cho, Jungwoo, Glickman, Jacob W, Hart, Felix, Chatterji, Om K, Scopino, Kristen, Voelkel-Meiman, Karen, Krizanc, Daniel, Thayer, Kelly M, Weir, Michael P

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The CAR-mRNA Interaction Surface Is a Zipper Extension of the Ribosome A Site von Dalgarno, Carol, Scopino, Kristen, Raval, Mitsu, Nachmanoff, Clara, Sakkas, Eric D, Krizanc, Daniel, Thayer, Kelly M, Weir, Michael P

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Insights into Rational Design of a New Class of Allosteric Effectors with Molecular Dynamics Markov State Models and Network Theory von Han, In Sub M, Abramson, Dylan, Thayer, Kelly M

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Ion Motions in Molecular Dynamics Simulations on DNA von Ponomarev, Sergei Y., Thayer, Kelly M., Beveridge, David L., Ratner, Mark A.

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Estradiol induces allosteric coupling and partitioning of sex-hormone-binding globulin monomers among conformational states von Jasuja, Ravi, Spencer, Daniel, Jayaraj, Abhilash, Peng, Liming, Krishna, Meenakshi, Lawney, Brian, Patel, Priyank, Jayaram, Bhyravabhotla, Thayer, Kelly M., Beveridge, David L., Bhasin, Shalender

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Molecular dynamics of mismatch detection—How MutS uses indirect readout to find errors in DNA von Jayaraj, Abhilash, Thayer, Kelly M., Beveridge, David L., Hingorani, Manju M.

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Diversity of T cell epitopes in Plasmodium falciparum circumsporozoite protein likely due to protein-protein interactions von Aragam, Nagesh R, Thayer, Kelly M, Nge, Nabi, Hoffman, Irving, Martinson, Francis, Kamwendo, Debbie, Lin, Feng-Chang, Sutherland, Colin, Bailey, Jeffrey A, Juliano, Jonathan J

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Exploring the Role of Msh2‐Msh6 in Processing Holliday Junction DNA von Du, Amy, Lombardo, Zane, Thayer, Kelly M., Mukerji, Ishita

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A Ribosome Interaction Surface Sensitive to mRNA GCN Periodicity von Scopino, Kristen, Williams, Elliot, Elsayed, Abdelrahman, Barr, William A, Krizanc, Daniel, Thayer, Kelly M, Weir, Michael P

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Variable Regions of p53 Isoforms Allosterically Hard Code DNA Interaction von Armour-Garb, Isabel, Han, In Sub Mark, Cowan, Benjamin S., Thayer, Kelly M.

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Allosteric Signaling in PDZ Energetic Networks: Embedding Error Analysis von Cowan, Benjamin S., Beveridge, David L., Thayer, Kelly M.

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Analyses of the Effects of All Ubiquitin Point Mutants on Yeast Growth Rate von Roscoe, Benjamin P., Thayer, Kelly M., Zeldovich, Konstantin B., Fushman, David, Bolon, Daniel N.A.

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Evolutionary Covariance Combined with Molecular Dynamics Predicts a Framework for Allostery in the MutS DNA Mismatch Repair Protein von Lakhani, Bharat, Thayer, Kelly M, Hingorani, Manju M, Beveridge, David L

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Navigating the complexity of p53-DNA binding: implications for cancer therapy von Thayer, Kelly M., Stetson, Sean, Caballero, Fernando, Chiu, Christopher, Han, In Sub Mark

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