Carcinoma ex pleomorphic adenoma: case report and options for systemic therapy von Chooback, N, Shen, Y, Jones, M, Kasaian, K, Martin, M, Ng, T, Thomson, T, Marra, M, Laskin, J, Ho, C

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Personalized oncogenomics in the management of gastrointestinal carcinomas-early experiences from a pilot study von Sheffield, B S, Tessier-Cloutier, B, Li-Chang, H, Shen, Y, Pleasance, E, Kasaian, K, Li, Y, Jones, S J M, Lim, H J, Renouf, D J, Huntsman, D G, Yip, S, Laskin, J, Marra, M, Schaeffer, D F

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ORegAnno: an open-access community-driven resource for regulatory annotation von Griffith, Obi L, Montgomery, Stephen B, Bernier, Bridget, Chu, Bryan, Kasaian, Katayoon, Aerts, Stein, Mahony, Shaun, Sleumer, Monica C, Bilenky, Mikhail, Haeussler, Maximilian, Griffith, Malachi, Gallo, Steven M, Giardine, Belinda, Hooghe, Bart, Van Loo, Peter, Blanco, Enrique, Ticoll, Amy, Lithwick, Stuart, Portales-Casamar, Elodie, Donaldson, Ian J, Robertson, Gordon, Wadelius, Claes, De Bleser, Pieter, Vlieghe, Dominique, Halfon, Marc S, Wasserman, Wyeth, Hardison, Ross, Bergman, Casey M, Jones, Steven J.M

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Demonstration of Temporal Heterogeneity Identified By Genome Sequencing and the Potential Effect on Treatment Decisions for Advanced Cancer Patients von Laskin, J., Moore, R., Shen, Y., Lim, H., Gelmon, K.A., Renouf, D., Yip, S., Huntsman, D., Ng, T., Mungall, A., Fok, A., Ho, C., Chia, S., Leelakumari, S., Kasaian, K., Eirew, P., Ma, Y., Aparicio, S., Jones, S., Marra, M.

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1570ODEMONSTRATION OF TEMPORAL HETEROGENEITY IDENTIFIED BY GENOME SEQUENCING AND THE POTENTIAL EFFECT ON TREATMENT DECISIONS FOR ADVANCED CANCER PATIENTS von Laskin, J., Moore, R., Shen, Y., Lim, H., Gelmon, K.A., Renouf, D., Yip, S., Huntsman, D., Ng, T., Mungall, A., Fok, A., Ho, C., Chia, S., Leelakumari, S., Kasaian, K., Eirew, P., Ma, Y., Aparicio, S., Jones, S., Marra, M.

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Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples von Bailey, MH, Meyerson, WU, Dursi, LJ, Wang, LB, Dong, G, Liang, WW, Weerasinghe, A, Li, S, Kelso, S, Akbani, R, Anur, P, Buchanan, A, Chiotti, K, Covington, K, Creason, A, Ding, L, Ellrott, K, Fan, Y, Foltz, S, Getz, G, Hale, W, Haussler, D, Hess, JM, Hutter, CM, Kandoth, C, Kasaian, K, Kasapi, M, Larson, D, Leshchiner, I, Letaw, J, Ma, S, McLellan, MD, Men, Y, Mills, GB, Niu, B, Peto, M, Radenbaugh, A, Reynolds, SM, Saksena, G, Sofia, H, Stewart, C, Struck, AJ, Stuart, JM, Wang, W, Weinstein, JN, Wheeler, DA, Wong, CK, Xi, L, Ye, K, Bieg, M, Buchhalter, I, Butler, AP, Chen, K, Chong, Z, Drechsel, O, Jonathan Dursi, L, Eils, R, Espiritu, SMG, Fulton, RS, Gao, S, Gelpi, JLL, Gonzalez, S, Gut, IG, Hach, F, Heinold, MC, Hinton, J, Hu, T, Huang, V, Huang, Y, Hutter, B, Jones, DR, Jung, J, Jäger, N, Kim, HL, Kleinheinz, K, Kumar, S, Kumar, Y, Lalansingh, CM, Letunic, I, Livitz, D, Ma, EZ, Maruvka, YE, Mashl, RJ, Menzies, A, Milovanovic, A, Nielsen, MM, Ossowski, S, Paramasivam, N, Pedersen, JS, Perry, MD, Puiggròs, M, Raine, KM, Toon, Christopher Chien Wei, Biankin, Andrew, Merrett, Neil, Pinese, Mark, Lau, Loretta, Gill, Anthony, Chou, Angela, Johns, Amber

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Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y... von Bailey, MH, Meyerson, WU, Dursi, LJ, Wang, LB, Dong, G, Liang, WW, Weerasinghe, A, Li, S, Li, Y, Kelso, S, Akbani, R, Anur, P, Buchanan, A, Chiotti, K, Covington, K, Creason, A, Ding, L, Ellrott, K, Fan, Y, Foltz, S, Getz, G, Hale, W, Haussler, D, Hess, JM, Hutter, CM, Kandoth, C, Kasaian, K, Kasapi, M, Larson, D, Leshchiner, I, Letaw, J, Ma, S, McLellan, MD, Men, Y, Mills, GB, Niu, B, Peto, M, Radenbaugh, A, Reynolds, SM, Saksena, G, Sofia, H, Stewart, C, Struck, AJ, Stuart, JM, Wang, W, Weinstein, JN, Wheeler, DA, Wong, CK, Xi, L, Ye, K, Bieg, M, Boutros, PC, Buchhalter, I, Butler, AP, Chen, K, Chong, Z, Drechsel, O, Jonathan Dursi, L, Eils, R, Espiritu, SMG, Fulton, RS, Gao, S, Gelpi, JLL, Gerstein, MB, Gonzalez, S, Gut, IG, Hach, F, Heinold, MC, Hinton, J, Hu, T, Huang, V, Huang, Y, Hutter, B, Jones, DR, Jung, J, Jäger, N, Kim, HL, Kleinheinz, K, Kumar, S, Kumar, Y, Lalansingh, CM, Letunic, I, Livitz, D, Ma, EZ, Maruvka, YE, Mashl, RJ, Menzies, A, Milovanovic, A, Nielsen, MM, Ossowski, S, Toon, Christopher Chien Wei, Merrett, Neil, Pinese, Mark, Lau, Loretta, Chou, Angela, Biankin, Andrew, Johns, Amber

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IL-13 as a therapeutic target for respiratory disease von Kasaian, Marion T., Miller, Douglas K.

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Anti-IL-13Rα2 therapy promotes recovery in a murine model of inflammatory bowel disease von Karmele, Erik P., Pasricha, Trisha S., Ramalingam, Thirumalai R., Thompson, Robert W., Gieseck, Richard L., Knilans, Kayla J., Hegen, Martin, Farmer, Mark, Jin, Fang, Kleinman, Aaron, Hinds, David A., Almeida Pereira, Thiago, de Queiroz Prado, Rafael, Bing, Nan, Tchistiakova, Lioudmila, Kasaian, Marion T., Wynn, Thomas A., Vannella, Kevin M.

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Proteomic analysis of serum and sputum analytes distinguishes controlled and poorly controlled asthmatics von Kasaian, M. T., Lee, J., Brennan, A., Danto, S. I., Black, K. E., Fitz, L., Dixon, A. E.

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IL-21 Limits NK Cell Responses and Promotes Antigen-Specific T Cell Activation: A Mediator of the Transition from Innate to Adaptive Immunity von Kasaian, Marion T, Whitters, Matthew J, Carter, Laura L, Lowe, Leslie D, Jussif, Jason M, Deng, Bijia, Johnson, Kaley A, Witek, JoAnn S, Senices, Mayra, Konz, Richard F, Wurster, Andrea L, Donaldson, Debra D, Collins, Mary, Young, Deborah A, Grusby, Michael J

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Integrated genomic characterization of oesophageal carcinoma von Reis, R. M., The Cancer Genome Atlas Research Network

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Integrated genomic and molecular characterization of cervical cancer von Saller, Charles, Tarvin, Katherine, Yau, Christina, Robertson, A. Gordon, Mungall, Karen, Lim, Lynette, Mar, Richard, Clarke, Amanda, Tam, Angela, Dhalla, Noreen, Carlsen, Rebecca, Holt, Robert A, Jones, Steven J. M, Hadjipanayis, Angela, Seidman, Jonathan, Rabeno, Brenda, Huelsenbeck-Dill, Lori, Iacocca, Mary, Petrelli, Nicholas, Adebamowo, Sally N, Adebamowo, Clement, Shelton, Candace, Crain, Daniel, Mallery, David, Curley, Erin, Gardner, Johanna, Shelton, Troy, Wu, Ye, Birrer, Michael, Miller, Christopher A, Fulton, Robert S, Appelbaum, Elizabeth L, Rader, Janet S, Behmaram, Behnaz, Bradley, William, Wrangle, John, Schultz, Nikolaus, Ladanyi, Marc, Felau, Ina, Zenklusen, Jean C, Demchok, John A, Sheth, Margi, Ferguson, Martin L, Tarnuzzer, Roy, Zhang, Jiashan, Wang, Zhining, Olaniyan, Olayinka, Sofia, Heidi J, Chen, Zhong, Saleh, Anthony D, Cheng, Hui, Parfitt, Jeremy, Albert, Monique, Sekhon, Harman, Gilbert, Sebastien, Myers, Jerome, Tucker, Kelinda, Lester, Jenny, Wan, Yunhu, Miller, Judy, Cherniack, Andrew D, Meyerson, Matthew, Voet, Doug, Kim, Jaegil, Lawrence, Michael S, Gehlenborg, Nils, Lin, Pei, Gabriel, Stacey B, Schumacher, Steven E, Leraas, Kristen M, Gastier-Foster, Julie M, Danilova, Ludmila, Salvesen, Helga B, Ju, Zhenlin, Diao, Lixia, Zhao, Hao, Ryan, Michael C, Averett Byers, Lauren, Yuan, Yuan, Bristow, Christopher A, Shaw, Kenna R. Mills, Radenbaugh, Amie, Chalise, Prabhakar, Godwin, Andrew K, Auman, J. Todd, Perou, Charles M, Veluvolu, Umadevi, Rathmell, W. Kimryn, Simons, Janae V, Mose, Lisle E, Shi, Yan, Thorne, Leigh B, Walker, Joan, Moore, Kathleen, McMeekin, Scott, Nelson, Tina, Bhargava, Rohit, Bootwalla, Moiz S, Triche, Timothy, Jr, Agnew, Kathy J

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Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer von Kim, Jaegil, Bellmunt, Joaquim, Cherniack, Andrew D., Hinoue, Toshinori, Hoadley, Katherine A., Gibb, Ewan A., Shukla, Sachet A., Sanchez-Vega, Francisco, Reuter, Victor E., Sadeghi, Sara, Pedamallu, Chandra Sekhar, Lu, Yiling, Klimczak, Leszek J., Zhang, Jiexin, Choo, Caleb, Leraas, Kristen M., Lichtenberg, Tara M., Schultz, Nicholaus, Getz, Gad, Mills, Gordon B., Al-Ahmadie, Hikmat, Alexopoulou, Iakovina, Ally, Adrian, Beaver, Allison, Bellmunt, Joaquim, Boice, Lori, Bootwalla, Moiz S., Bowen, Jay, Brooks, Denise, Broom, Bradley M., Bshara, Wiam, Bullman, Susan, Burks, Eric, Carvalho, Benilton S., Carvalho, Andre L., Castro, Mauro A.A., Chagas, Vinicius S., Cherniack, Andrew D., Cortessis, Victoria K., Czerniak, Bogdan A., Daneshmand, Siamak, Dhalla, Noreen, Egea, Sophie C., Engel, Jay, Felau, Ina, Gastier-Foster, Julie M., Getz, Gad, Gordenin, Dmitry A., Hansel, Donna E., Harr, Jodi, Hartmann, Arndt, Hinoue, Toshinori, Jones, Steven J.M., Kahnoski, Richard J., Kasaian, Katayoon, Lai, Phillip H., Lane, Brian R., Liu, Jia, Lolla, Laxmi, Lotan, Yair, Lu, Yiling, Lucchesi, Fabiano R., Mallery, David, Marra, Marco A., Mills, Gordon B., Mungall, Karen L., Ojesina, Akinyemi I., Parekh, Dipen J., Sekhar Pedamallu, Chandra, Pihl, Todd, Rathmell, W. Kimryn, Robertson, A. Gordon, Sadeghi, Sara, Saller, Charles, Salner, Andrew, Sanchez-Vega, Francisco, Scapulatempo-Neto, Cristovam, Schuckman, Anne K., Shukla, Sachet A., Simko, Jeff, Sipahimalani, Payal, Sorcini, Andrea, Stoehr, Robert, Su, Xiaoping, Tarnuzzer, Roy, Thiessen, Nina, Thorne, Leigh, Tse, Kane, Wach, Sven, Wang, Zhining, Weinstein, John N., Wise, Lisa, Wong, Tina, Wu, Ye, Zach, Leigh Anne, Zenklusen, Jean C., Zhang, Jiashan (Julia), Zhang, Jiexin, Zwarthoff, Ellen C., Weinstein, John N.

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Comprehensive Molecular Characterization of Pheochromocytoma and Paraganglioma von Robertson, A. Gordon, Lichtenberg, Tara M., Else, Tobias, Ling, Shiyun, Jefferys, Stuart R., Wenz, Brandon, Korpershoek, Esther, Amelio, Antonio L., Makowski, Liza, Gimenez-Roqueplo, Anne-Paule, Amar, Laurence, Arachchi, Harindra, Asa, Sylvia L., Balasundaram, Miruna, Balu, Saianand, Benz, Christopher, Bodenheimer, Tom, Boice, Lori, Bowen, Jay, Brooks, Denise, Cherniack, Andrew D., Cho, Juok, Cope, Leslie, Danilova, Ludmila, Deutschbein, Timo, Dhalla, Noreen, Eng, Charis, Eschbacher, Jennifer, Fassnacht, Martin, Ferguson, Martin L., Fiddes, Ian, Fishbein, Lauren, Frazer, Scott, Gastier-Foster, Julie M., Getz, Gad, Ghayee, Hans K., Haussler, David, Hayes, D. Neil, Heiman, David I., Hoadley, Katherine A., Holt, Robert A., Huang, Mei, Johnson, Amy R., Jones, Steven J.M., Kebebew, Electron, Korpershoek, Esther, Lee, Darlene, Lerario, Antonio, Leshchiner, Ignaty, Lin, Pei, Liu, Jia, Lolla, Laxmi, Lotan, Yair, Lu, Yiling, Makowski, Liza, Mallery, David, Marra, Marco A., Merino, Maria J., Mete, Ozgur, Meyerson, Matthew, Morris, Scott, Mose, Lisle E., Naresh, Rashi, Newton, Yulia, Ng, Sam, Ni, Ying, Pacak, Karel, Paul, Evan, Penny, Robert, Pihl, Todd, Rao, Arjun, Roach, Jeffrey, Salama, Sofie, Saller, Charles, Sandusky, George, Sbiera, Silviu, Schein, Jacqueline E., Schumacher, Steven E., Shelton, Candace, Shelton, Troy, Sokolov, Artem, Soloway, Matthew G., Thorne, Leigh B., Timmers, Henri J., Tse, Kane, van Berkel, Anouk, Veluvolu, Umadevi, Voet, Doug, Wan, Yunhu, Wang, Tracy S., Weinstein, John N., Wenz, Brandon, Wilkerson, Matthew D., Wise, Lisa, Wong, Christopher, Zhang, Jiashan (Julia), Zhu, Jingchun, Zmuda, Erik, Pacak, Karel, Wilkerson, Matthew D.

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Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas von Brat, Daniel J, Verhaak, Roel G W, Aldape, Kenneth D, Yung, W K Alfred, Salama, Sofie R, Cooper, Lee A D, Rheinbay, Esther, Miller, C Ryan, Vitucci, Mark, Morozova, Olena, Robertson, A Gordon, Noushmehr, Houtan, Laird, Peter W, Cherniack, Andrew D, Akbani, Rehan, Huse, Jason T, Ciriello, Giovanni, Poisson, Laila M, Barnholtz-Sloan, Jill S, Berger, Mitchel S, Brennan, Cameron, Colen, Rivka R, Colman, Howard, Flanders, Adam E, Giannini, Caterina, Grifford, Mia, Iavarone, Antonio, Jain, Rajan, Joseph, Isaac, Kim, Jaegil, Kasaian, Katayoon, Mikkelsen, Tom, Murray, Bradley A, O'Neill, Brian Patrick, Pachter, Lior, Parsons, Donald W, Sougnez, Carrie, Sulman, Erik P, Vandenberg, Scott R, Van Meir, Erwin G, von Deimling, Andreas, Zhang, Hailei, Crain, Daniel, Lau, Kevin, Mallery, David, Morris, Scott, Paulauskis, Joseph, Penny, Robert, Shelton, Troy, Sherman, Mark, Yena, Peggy, Black, Aaron, Bowen, Jay, Dicostanzo, Katie, Gastier-Foster, Julie, Leraas, Kristen M, Lichtenberg, Tara M, Pierson, Christopher R, Ramirez, Nilsa C, Taylor, Cynthia, Weaver, Stephanie, Wise, Lisa, Zmuda, Erik, Davidsen, Tanja, Demchok, John A, Eley, Greg, Ferguson, Martin L, Hutter, Carolyn M, Mills Shaw, Kenna R, Ozenberger, Bradley A, Sheth, Margi, Sofia, Heidi J, Tarnuzzer, Roy, Wang, Zhining, Yang, Liming, Zenklusen, Jean Claude, Ayala, Brenda, Baboud, Julien, Chudamani, Sudha, Jensen, Mark A, Liu, Jia, Pihl, Todd, Raman, Rohini, Wan, Yunhu, Wu, Ye, Ally, Adrian, Auman, J Todd, Balasundaram, Miruna, Balu, Saianand, Baylin, Stephen B, Beroukhim, Rameen, Bootwalla, Moiz S, Bowlby, Reanne, Bristow, Christopher A, Brooks, Denise, Butterfield, Yaron, Carlsen, Rebecca, Carter, Scott, Chin, Lynda, Chu, Andy

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Comprehensive molecular characterization of gastric adenocarcinoma von Bass, Adam J

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Integrated Genomic Characterization of Papillary Thyroid Carcinoma von Akbani, Rehan, Aksoy, B. Arman, Ally, Adrian, Balasundaram, Miruna, Bernard, Brady, Beroukhim, Rameen, Black, Aaron D., Bodenheimer, Tom, Bowen, Jay, Bristow, Christopher A., Brookens, Robin, Buda, Elizabeth, Butterfield, Yaron S.N., Carty, Sally E., Chin, Lynda, Chuah, Eric, Cibulskis, Kristian, Clarke, Amanda, Clayman, Gary L., Cope, Leslie, Copland, John A., Davidsen, Tanja, Dhir, Rajiv, Dresdner, Gideon, Eldridge, Jonathan, Eley, Greg, El-Naggar, Adel K., Fisher, Sheila, Garraway, Levi A., Getz, Gad, Gehlenborg, Nils, Gibbs, Richard A., Gomez-Hernandez, Karen, Guin, Ranabir, Harper, Hollie A., Heiman, David I., Herman, James G., Hoadley, Katherine A., Hofree, Matan, Holt, Robert A., Hoyle, Alan P., Huang, Franklin W., Ideker, Trey, Kasaian, Katayoon, Khuri, Fadlo R., Kramer, Roger, Ladanyi, Marc, Lander, Eric, Lawrence, Michael S., Lee, Darlene, Leraas, Kristen M., Ling, Shiyun, Liu, Wenbin, LiVolsi, Virginia A., Ma, Yussanne, Mahadeshwar, Harshad S., Mills, Gordon, Mose, Lisle E., Murray, Bradley A., Noble, Michael S., Owonikoko, Taofeek K., Pantazi, Angeliki, Pedamallu, Chandra Sekhar, Perou, Charles M., Prins, Jan F., Ren, Xiaojia, Reynolds, Sheila M., Robertson, A. Gordon, Rosenberg, Mara W., Rosenthal, Matthew, Schein, Jacqueline E., Seethala, Raja R., Shaw, Kenna R. Mills, Sheth, Margi, Shi, Yan, Sica, Gabriel L., Sipahimalani, Payal, Smallridge, Robert C., Sofia, Heidi J., Stuart, Joshua M., Sumer, S. Onur, Tam, Angela, Tarnuzzer, Roy, Thiessen, Nina, Thorne, Leigh, Thorsson, Vésteinn, Vandin, Fabio, Veluvolu, Umadevi, Vinco, Michelle, Voet, Doug, Weinhold, Nils, Wheeler, David, Wilson, Jocelyn, Williams, Michelle, Xu, Andrew W., Yang, Liming, Yang, Lixing, Zeng, Dong, Zhang, Jiashan (Julia), Zmuda, Erik

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Biallelic Alteration and Dysregulation of the Hippo Pathway in Mucinous Tubular and Spindle Cell Carcinoma of the Kidney von Mehra, Rohit, Vats, Pankaj, Cieslik, Marcin, Cao, Xuhong, Su, Fengyun, Shukla, Sudhanshu, Udager, Aaron M, Wang, Rui, Pan, Jincheng, Kasaian, Katayoon, Lonigro, Robert, Siddiqui, Javed, Premkumar, Kumpati, Palapattu, Ganesh, Weizer, Alon, Hafez, Khaled S, Wolf, Jr, J Stuart, Sangoi, Ankur R, Trpkov, Kiril, Osunkoya, Adeboye O, Zhou, Ming, Giannico, Giovanna, McKenney, Jesse K, Dhanasekaran, Saravana M, Chinnaiyan, Arul M

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The Somatic Genomic Landscape of Chromophobe Renal Cell Carcinoma von Davis, Caleb F., Ricketts, Christopher J., Wang, Min, Kim, Sang Cheol, Hacker, Kathryn E., Bhanot, Gyan, Gordenin, Dmitry A., Biehl, Michael, Kaipparettu, Benny A., Donehower, Lawrence A., Tamboli, Pheroze, Hsieh, James J., Hakimi, A. Ari, Creighton, Chad J., Davis, Caleb F., Morgan, Margaret, Donehower, Lawrence A., Wheeler, David A., Cherniack, Andrew D., Choueiri, Toni K., Kwiatkowski, David J., Hakimi, A. Ari, Ricketts, Christopher, Rathmell, W. Kimryn, Smith, Angela B., Wallen, Eric M., Muzny, Donna, Xi, Liu, Reid, Jeffrey G., Downs, Brittany, Doddapaneni, Harsha, Lewis, Lora, English, Adam, Meng, Qingchang, Kovar, Christie, Hale, Walker, Sougnez, Carrie, Getz, Gad, Beroukhim, Rameen, Gabriel, Stacey B., Balasundaram, Miruna, Dhalla, Noreen, Guin, Ranabir, Holt, Robert A., Lee, Darlene, Lim, Emilia, Sipahimalani, Payal, Thiessen, Nina, Jones, Steven J.M., Hoadley, Katherine A., Mieczkowski, Piotr A., Roach, Jeffrey, Wu, Junyuan, Hoyle, Alan P., Balu, Saianand, Hayes, D. Neil, Bootwalla, Moiz S., Chen, Fengju, Noble, Michael S., DiCara, Daniel, Zou, Lihua, Chin, Lynda, Protopopov, Alexei, Song, Xingzhi, Lee, Eunjung, Luquette, Lovelace J., Lee, Semin, Xu, Andrew W., Kucherlapati, Raju, Park, Peter J., Fargo, David, Choi, Yoon-La, Lee, June-Koo, Akbani, Rehan, Weinstein, John N., Haussler, David, Lichtenberg, Tara M., Leraas, Kristen M., Kaelin, William G., Vocke, Cathy, Worrell, Robert, Merino, Maria, Spellman, Paul T., Cheville, John, Baboud, Julien, Velaga, Sudhakar, Liu, Jia, Chudamani, Sudha, Wu, Ye, Sheth, Margi, Mills Shaw, Kenna R., Yang, Liming, Wang, Zhining, Hutter, Carolyn M., Sofia, Heidi J., Kucherlapati, Raju, Park, Woong-Yang, Robertson, A. Gordon, Kwiatkowski, David J., Park, Peter J.

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