Characterization of Bacterial and Fungal Communities Reveals Novel Consortia in Tropical Oligotrophic Peatlands von Morrison, Elise S., Thomas, P., Ogram, A., Kahveci, T., Turner, B. L., Chanton, J. P.

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Optimizing similarity search for arbitrary length time series queries von Kahveci, T., Singh, A.K.

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Alginate: Current Use and Future Perspectives in Pharmaceutical and Biomedical Applications von Ciosek, Patrycja, Szymańska, Emilia, Puciłowska, Agata, Szekalska, Marta, Winnicka, Katarzyna

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SubMAP: aligning metabolic pathways with subnetwork mappings von Ay, Ferhat, Kellis, Manolis, Kahveci, Tamer

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Variable length queries for time series data von Kahveci, T., Singh, A.

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Probabilistic Biological Network Alignment von Todor, A., Dobra, A., Kahveci, T.

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Action Language Verifier von Bultan, T., Yavuz-Kahveci, T.

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Workload characterization of bioinformatics applications von Li, Y., Li, T., Kahveci, T., Fortes, J.

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Large-Scale Signaling Network Reconstruction von Hashemikhabir, S., Ayaz, E. S., Kavurucu, Y., Can, T., Kahveci, T.

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Principles of regulatory information conservation between mouse and human von Cheng, Yong, Ma, Zhihai, Kim, Bong-Hyun, Wu, Weisheng, Cayting, Philip, Boyle, Alan P., Sundaram, Vasavi, Xing, Xiaoyun, Dogan, Nergiz, Li, Jingjing, Euskirchen, Ghia, Lin, Shin, Lin, Yiing, Visel, Axel, Kawli, Trupti, Yang, Xinqiong, Patacsil, Dorrelyn, Keller, Cheryl A., Giardine, Belinda, The Mouse ENCODE Consortium, Kundaje, Anshul, Wang, Ting, Pennacchio, Len A., Weng, Zhiping, Hardison, Ross C., Snyder, Michael P.

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GBA manager: an online tool for querying low-complexity regions in proteins von Bandyopadhyay, Nirmalya, Kahveci, Tamer

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Fast alignment of large genome databases: a demonstration von Kahveci, T., Singh, A.K.

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Inferring progression models for CGH data von Liu, J, Bandyopadhyay, N, Ranka, S, Baudis, Michael, Kahveci, T

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Optimal use of oral nutritional supplements (ONS) in medical nutrition therapy: ONS consensus report from KEPAN von Bahat, Gulistan, Akmansu, Muge, Gungor, Levent, Halil, Meltem, Bicakli, Derya Hopanci, Koc, Nevra, Ozogul, Yusuf, Sungurtekin, Hulya, Abbasoglu, Osman

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Joining massive high-dimensional datasets von Kahveci, T., Lang, C.A., Singh, A.K.

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Epidemiological characteristics, practice of ventilation, and clinical outcome in patients at risk of acute respiratory distress syndrome in intensive care units from 16 countries... von Neto, Ary Serpa, Dr, Barbas, Carmen S V, MD, Simonis, Fabienne D, MD, Artigas-Raventós, Antonio, MD, Canet, Jaume, MD, Determann, Rogier M, MD, Anstey, James, MD, Hedenstierna, Goran, MD, Hemmes, Sabrine N T, MD, Hermans, Greet, MD, Hiesmayr, Michael, MD, Hollmann, Markus W, MD, Jaber, Samir, MD, Martin-Loeches, Ignacio, MD, Mills, Gary H, MD, Pearse, Rupert M, MD, Putensen, Christian, MD, Schmid, Werner, MD, Severgnini, Paolo, MD, Smith, Roger, MD, Treschan, Tanja A, MD, Tschernko, Edda M, MD, Melo, Marcos F V, MD, Wrigge, Hermann, MD, de Abreu, Marcelo Gama, MD, Pelosi, Paolo, MD, Schultz, Marcus J, MD

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Gynecologic & obstetric imaging von Refahi, S., Pourissa, M., Refahi, R., Mardi, A., Mashoufi, M., Jabbarzadeh, T., Gezginc, K., Celik, C., Bala, A., Acar, A., Cicek, M. N., Akyürek, C., Tanriverdi, H. A., Cinar, E., Akbulut, V., Barut, A., Haberal, A., Kayikcioglu, F., Erol, O., Gunes, M., Secilmis, O., Altunyurt, S., Gol, M., Sezer, O., Demir, N., Taskin, S., Özmen, B., Kahveci, T., Sezginkurt, E., Seval, M., Ünlü, C., Bayramov, V., Sari, E., Biri, A., Kurdoglu, M., Kurdoglu, Z., Gultekin, S., Gursel, T., Topuz, S., Citil, I., Akhan, S. E., Berkman, S., Turp, A., Günaydin, G., Onan, A., Erdem, A., Himmetoglu, Ö., Usal, D., Bayar, Ü., Sade, H.

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Speeding up whole-genome alignment by indexing frequency vectors von Kahveci, Tamer, Ljosa, Vebjorn, Singh, Ambuj K.

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PSI: indexing protein structures for fast similarity search von Camoglu, Orhan, Kahveci, Tamer, Singh, Ambuj K.

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QOMA2: Optimizing the alignment of many sequences von Xu Zhang, Kahveci, T.

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