iGEAK: an interactive gene expression analysis kit for seamless workflow using the R/shiny platform von Choi, Kwangmin, Ratner, Nancy

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Adaptive response to inflammation contributes to sustained myelopoiesis and confers a competitive advantage in myelodysplastic syndrome HSCs von Muto, Tomoya, Walker, Callum S., Choi, Kwangmin, Hueneman, Kathleen, Smith, Molly A., Gul, Zartash, Garcia-Manero, Guillermo, Ma, Averil, Zheng, Yi, Starczynowski, Daniel T.

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U2AF1 mutations induce oncogenic IRAK4 isoforms and activate innate immune pathways in myeloid malignancies von Smith, Molly A., Choudhary, Gaurav S., Pellagatti, Andrea, Choi, Kwangmin, Bolanos, Lyndsey C., Bhagat, Tushar D., Gordon-Mitchell, Shanisha, Von Ahrens, Dagny, Pradhan, Kith, Steeples, Violetta, Kim, Sanghyun, Steidl, Ulrich, Walter, Matthew, Fraser, Iain D. C., Kulkarni, Aishwarya, Salomonis, Nathan, Komurov, Kakajan, Boultwood, Jacqueline, Verma, Amit, Starczynowski, Daniel T.

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Germline DDX41 mutations cause ineffective hematopoiesis and myelodysplasia von Chlon, Timothy M., Stepanchick, Emily, Hershberger, Courtney E., Daniels, Noah J., Hueneman, Kathleen M., Kuenzi Davis, Ashley, Choi, Kwangmin, Zheng, Yi, Gurnari, Carmelo, Haferlach, Torsten, Padgett, Richard A., Maciejewski, Jaroslaw P., Starczynowski, Daniel T.

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Single cell RNA-seq reveals cellular and transcriptional heterogeneity in the splenic CD11b+Ly6Chigh monocyte population expanded in sepsis-surviving mice von Watanabe, Haruki, Rana, Minakshi, Son, Myoungsun, Chiu, Pui Yan, Fei-Bloom, Yurong, Choi, Kwangmin, Diamond, Betty, Sherry, Barbara

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Insight on Transcriptional Regulation of the Energy Sensing AMPK and Biosynthetic mTOR Pathway Genes von Sukumaran, Abitha, Choi, Kwangmin, Dasgupta, Biplab

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Programming of Schwann Cells by Lats1/2-TAZ/YAP Signaling Drives Malignant Peripheral Nerve Sheath Tumorigenesis von Wu, Lai Man Natalie, Deng, Yaqi, Wang, Jincheng, Zhao, Chuntao, Wang, Jiajia, Rao, Rohit, Xu, Lingli, Zhou, Wenhao, Choi, Kwangmin, Rizvi, Tilat A., Remke, Marc, Rubin, Joshua B., Johnson, Randy L., Carroll, Thomas J., Stemmer-Rachamimov, Anat O., Wu, Jianqiang, Zheng, Yi, Xin, Mei, Ratner, Nancy, Lu, Q. Richard

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Chemotherapy resistance in acute myeloid leukemia is mediated by A20 suppression of spontaneous necroptosis von Culver-Cochran, Ashley E., Hassan, Aishlin, Hueneman, Kathleen, Choi, Kwangmin, Ma, Averil, VanCauwenbergh, Brett, O’Brien, Eric, Wunderlich, Mark, Perentesis, John P., Starczynowski, Daniel T.

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The deubiquitinase USP15 modulates cellular redox and is a therapeutic target in acute myeloid leukemia von Niederkorn, Madeline, Ishikawa, Chiharu, M. Hueneman, Kathleen, Bartram, James, Stepanchick, Emily, R. Bennett, Joshua, E. Culver-Cochran, Ashley, Bolanos, Lyndsey C., Uible, Emma, Choi, Kwangmin, Wunderlich, Mark, Perentesis, John P., M. Chlon, Timothy, Filippi, Marie-Dominique, Starczynowski, Daniel T.

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Inactivation of p53 provides a competitive advantage to del(5q) myelodysplastic syndrome hematopoietic stem cells during inflammation von Muto, Tomoya, Walker, Callum S, Agarwal, Puneet, Vick, Eric, Sampson, Avery, Choi, Kwangmin, Niederkorn, Madeline, Ishikawa, Chiharu, Hueneman, Kathleen, Varney, Melinda, Starczynowski, Daniel T

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Mitochondrial Fragmentation Triggers Ineffective Hematopoiesis in Myelodysplastic Syndromes von Aoyagi, Yasushige, Hayashi, Yoshihiro, Harada, Yuka, Choi, Kwangmin, Matsunuma, Natsumi, Sadato, Daichi, Maemoto, Yuki, Ito, Akihiro, Yanagi, Shigeru, Starczynowski, Daniel T, Harada, Hironori

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Forward genetic screen for malignant peripheral nerve sheath tumor formation identifies new genes and pathways driving tumorigenesis von Rahrmann, Eric P, Watson, Adrienne L, Keng, Vincent W, Choi, Kwangmin, Moriarity, Branden S, Beckmann, Dominic A, Wolf, Natalie K, Sarver, Aaron, Collins, Margaret H, Moertel, Christopher L, Wallace, Margaret R, Gel, Bernat, Serra, Eduard, Ratner, Nancy, Largaespada, David A

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MicroRNA-155 contributes to plexiform neurofibroma growth downstream of MEK von Na, Youjin, Hall, Ashley, Choi, Kwangmin, Hu, Liang, Rose, Jonathan, Coover, Robert A., Miller, Adam, Hennigan, Robert F., Dombi, Eva, Kim, Mi-Ok, Subramanian, Subbaya, Ratner, Nancy, Wu, Jianqiang

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MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression von Nam, Seungyoon, Li, Meng, Choi, Kwangmin, Balch, Curtis, Kim, Sun, Nephew, Kenneth P

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TRAF6 Mediates Basal Activation of NF-κB Necessary for Hematopoietic Stem Cell Homeostasis von Fang, Jing, Muto, Tomoya, Kleppe, Maria, Bolanos, Lyndsey C., Hueneman, Kathleen M., Walker, Callum S., Sampson, Leesa, Wellendorf, Ashley M., Chetal, Kashish, Choi, Kwangmin, Salomonis, Nathan, Choi, Yongwon, Zheng, Yi, Cancelas, Jose A., Levine, Ross L., Starczynowski, Daniel T.

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TNF-α-induced alterations in stromal progenitors enhance leukemic stem cell growth via CXCR2 signaling von Agarwal, Puneet, Li, Hui, Choi, Kwangmin, Hueneman, Kathleen, He, Jianbo, Welner, Robert S., Starczynowski, Daniel T., Bhatia, Ravi

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TIFAB Regulates USP15-Mediated p53 Signaling during Stressed and Malignant Hematopoiesis von Niederkorn, Madeline, Hueneman, Kathleen, Choi, Kwangmin, Varney, Melinda E., Romano, Laurel, Pujato, Mario A., Greis, Kenneth D., Inoue, Jun-ichiro, Meetei, Ruhikanta, Starczynowski, Daniel T.

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WNT5A inhibition alters the malignant peripheral nerve sheath tumor microenvironment and enhances tumor growth von Thomson, Craig S., Pundavela, Jay, Perrino, Melissa R., Coover, Robert A., Choi, Kwangmin, Chaney, Katherine E., Rizvi, Tilat A., Largaespada, David A., Ratner, Nancy

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A molecular basis for neurofibroma-associated skeletal manifestations in NF1 von Ma, Yun, Gross, Andrea M., Dombi, Eva, Pemov, Alexander, Choi, Kwangmin, Chaney, Katherine, Rhodes, Steven D., Angus, Steven P., Sciaky, Noah, Clapp, D. Wade, Ratner, Nancy, Widemann, Brigitte C., Rios, Jonathan J., Elefteriou, Florent

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Hepatic Ago2-mediated RNA silencing controls energy metabolism linked to AMPK activation and obesity-associated pathophysiology von Zhang, Cai, Seo, Joonbae, Murakami, Kazutoshi, Salem, Esam S. B., Bernhard, Elise, Borra, Vishnupriya J., Choi, Kwangmin, Yuan, Celvie L., Chan, Calvin C., Chen, Xiaoting, Huang, Taosheng, Weirauch, Matthew T., Divanovic, Senad, Qi, Nathan R., Thomas, Hala Einakat, Mercer, Carol A., Siomi, Haruhiko, Nakamura, Takahisa

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