Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples von Mirzazadeh, Reza, Andrusivova, Zaneta, Larsson, Ludvig, Newton, Phillip T., Galicia, Leire Alonso, Abalo, Xesús M., Avijgan, Mahtab, Kvastad, Linda, Denadai-Souza, Alexandre, Stakenborg, Nathalie, Firsova, Alexandra B., Shamikh, Alia, Jurek, Aleksandra, Schultz, Niklas, Nistér, Monica, Samakovlis, Christos, Boeckxstaens, Guy, Lundeberg, Joakim

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Spatial transcriptomics reveals substantial heterogeneity in triple-negative breast cancer with potential clinical implications von Wang, Xiaoxiao, Venet, David, Lifrange, Frédéric, Larsimont, Denis, Rediti, Mattia, Stenbeck, Linnea, Dupont, Floriane, Rouas, Ghizlane, Garcia, Andrea Joaquin, Craciun, Ligia, Buisseret, Laurence, Ignatiadis, Michail, Carausu, Marcela, Bhalla, Nayanika, Masarapu, Yuvarani, Villacampa, Eva Gracia, Franzén, Lovisa, Saarenpää, Sami, Kvastad, Linda, Thrane, Kim, Lundeberg, Joakim, Rothé, Françoise, Sotiriou, Christos

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The spatial RNA integrity number assay for in situ evaluation of transcriptome quality von Kvastad, Linda, Carlberg, Konstantin, Larsson, Ludvig, Villacampa, Eva Gracia, Stuckey, Alexander, Stenbeck, Linnea, Mollbrink, Annelie, Zamboni, Margherita, Magnusson, Jens Peter, Basmaci, Elisa, Shamikh, Alia, Prochazka, Gabriela, Schaupp, Anna-Lena, Borg, Åke, Fugger, Lars, Nistér, Monica, Lundeberg, Joakim

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Regulation of Subunit-Specific Germinal Center B Cell Responses to the HIV-1 Envelope Glycoproteins by Antibody-Mediated Feedback von Forsell, Mattias N E, Kvastad, Linda, Sedimbi, Saikiran K, Andersson, John, Karlsson, Mikael C I

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CCL2 mediates anti-fibrotic effects in human fibroblasts independently of CCR2 von Kalderén, Christina, Stadler, Charlotte, Forsgren, Margareta, Kvastad, Linda, Johansson, Elin, Sydow-Bäckman, Mona, Svensson Gelius, Stefan

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Genome-wide spatial expression profiling in formalin-fixed tissues von Gracia Villacampa, Eva, Larsson, Ludvig, Mirzazadeh, Reza, Kvastad, Linda, Andersson, Alma, Mollbrink, Annelie, Kokaraki, Georgia, Monteil, Vanessa, Schultz, Niklas, Appelberg, Karin Sofia, Montserrat, Nuria, Zhang, Haibo, Penninger, Josef M., Miesbach, Wolfgang, Mirazimi, Ali, Carlson, Joseph, Lundeberg, Joakim

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Spatial transcriptomics data identifies disease-relevant tissue structures from genetically implicated GWAS genes and drug targets von Kvastad, Linda, Kollotzek, Aaron, Chang, Chih-Fan, Lappalainen, Tuuli

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Spatially resolved clonal copy number alterations in benign and malignant tissue von Erickson, Andrew, He, Mengxiao, Berglund, Emelie, Marklund, Maja, Mirzazadeh, Reza, Schultz, Niklas, Kvastad, Linda, Andersson, Alma, Bergenstråhle, Ludvig, Bergenstråhle, Joseph, Larsson, Ludvig, Alonso Galicia, Leire, Shamikh, Alia, Basmaci, Elisa, Díaz De Ståhl, Teresita, Rajakumar, Timothy, Doultsinos, Dimitrios, Thrane, Kim, Ji, Andrew L., Khavari, Paul A., Tarish, Firaz, Tanoglidi, Anna, Maaskola, Jonas, Colling, Richard, Mirtti, Tuomas, Hamdy, Freddie C., Woodcock, Dan J., Helleday, Thomas, Mills, Ian G., Lamb, Alastair D., Lundeberg, Joakim

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The Spatial Context – through the lens of method development von Kvastad, Linda

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Multiplex PCB-based electrochemical detection of cancer biomarkers using MLPA-barcode approach von Sánchez, J.L. Acero, Henry, O.Y.F., Joda, H., Solnestam, B. Werne, Kvastad, L., Johansson, E., Akan, P., Lundeberg, J., Lladach, N., Ramakrishnan, D., Riley, I., O'Sullivan, C.K.

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Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples von Mirzazadeh, Reza, Andrusivova, Zaneta, Larsson, Ludvig, Newton, Phillip T, Galicia, Leire Alonso, Abalo, Xesus M, Avijgan, Mahtab, Kvastad, Linda, Denadai-Souza, Alexandre, Stakenborg, Nathalie, Firsova, Alexandra B, Shamikh, Alia, Jurek, Aleksandra, Schultz, Niklas, Nister, Monica, Samakovlis, Christos, Boeckxstaens, Guy, Lundeberg, Joakim

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The spatial landscape of clonal somatic mutations in benign and malignant prostate epithelia von Erickson, A.M., Berglund, E., He, M., Marklund, M., Mirzazadeh, R., Schultz, N., Bergenstråhle, L., Kvastad, L., Andersson, A., Bergenstråhle, J., Larsson, L., Rajakumar, T., Thrane, K., Ji, A.L., Tarish, F., Tanoglidi, A., Maaskola, J., Colling, R., Mirtti, T., Hamdy, F.C., Woodcock, D.J., Helleday, T., Mills, I.G., Lamb, A., Lundenberg, J.

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The spatial landscape of clonal somatic mutations in benign and malignant tissue von Erickson, Andrew, Berglund, Emelie, He, Mengxiao, Marklund, Maja, Mirzazadeh, Reza, Schultz, Niklas, Kvastad, Linda, Andersson, Alma, Bergenstråhle, Ludvig, Bergenstråhle, Joseph, Larsson, Ludvig, Shamikh, Alia, Basmaci, Elisa, De Stahl, Teresita Diaz, Rajakumar, Timothy, Thrane, Kim, Ji, Andrew L., Khavari, Paul A., Tarish, Firaz, Tanoglidi, Anna, Maaskola, Jonas, Colling, Richard, Mirtti, Tuomas, Hamdy, Freddie, Woodcock, Dan J., Helleday, Thomas, Mills, Ian G., Lamb, Alastair D., Lundeberg, Joakim

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Single cell analysis of cancer cells using an improved RT-MLPA method has potential for cancer diagnosis and monitoring von Kvastad, L., Werne Solnestam, B., Johansson, E., Nygren, A. O., Laddach, N., Sahlén, P., Vickovic, S., Bendigtsen, Schirmer C., Aaserud, M., Floer, L., Borgen, E., Schwind, C., Himmelreich, R., Latta, D., Lundeberg, J.

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Electrochemical Genetic Profiling of Single Cancer Cells von Acero Sánchez, Josep Ll, Joda, Hamdi, Henry, Olivier Y. F, Solnestam, Beata W, Kvastad, Linda, Akan, Pelin S, Lundeberg, Joakim, Laddach, Nadja, Ramakrishnan, Dheeraj, Riley, Ian, Schwind, Carmen, Latta, Daniel, O’Sullivan, Ciara K

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Abstract A051: The spatial landscape of clonal somatic copy number alterations in benign and malignant prostate epithelia von Erickson, Andrew, He, Mengxiao, Berglund, Emelie, Marklund, Maja, Mirzazadeh, Reza, Schultz, Niklas, Kvastad, Linda, Andersson, Alma, Bergenstråhle, Ludvig, Bergenstråhle, Joseph, Larsson, Ludvig, Galicia, Leire Alonso, Shamikh, Alia, Basmaci, Elisa, De Ståhl, Teresita Díaz, Rajakumar, Timothy, Doultsinos, Dimitrios, Thrane, Kim, Ji, Andrew L., Khavari, Paul A., Tarish, Firaz, Tanoglidi, Anna, Maaskola, Jonas, Colling, Richard, Mirtti, Tuomas, Hamdy, Freddie C., Woodcock, Dan J., Helleday, Thomas, Mills, Ian G., Lamb, Alastair D., Lundeberg, Joakim

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Abstract 2171: The spatial landscape of clonal somatic mutations in benign and malignant tissue von Erickson, Andrew, Berglund, Emelie, He, Mengxiao, Marklund, Maja, Mirzazadeh, Reza, Schultz, Niklas, Kvastad, Linda, Andersson, Alma, Bergenstråhle, Ludvig, Bergenstråhle, Joseph, Larsson, Ludvig, Shamikh, Alia, Basmaci, Elisa, De Ståhl, Teresita Diaz, Rajakumar, Timothy, Thrane, Kim, Ji, Andrew L., Khavari, Paul A., Tarish, Firaz, Tanoglidi, Anna, Maaskola, Jonas, Colling, Richard, Mirtti, Tuomas, Hamdy, Freddie, Woodcock, Dan J., Helleday, Thomas, Mills, Ian G., Lamb, Alastair D., Lundenberg, Joakim

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Abstract PR016: The spatial landscape of clonal somatic mutations in benign and malignant tissue von Erickson, Andrew, Berglund, Emelie, He, Mengxiao, Marklund, Maja, Mirzazadeh, Reza, Schultz, Niklas, Bergenstråhle, Ludvig, Kvastad, Linda, Andersson, Alma, Bergenstråhle, Joseph, Larsson, Ludvig, Shamikh, Alia, Basmaci, Elisa, De Ståhl, Teresita Diaz, Rajakumar, Timothy, Thrane, Kim, Ji, Andrew L., Khavari, Paul A., Tarish, Firaz, Tanoglidi, Anna, Maaskola, Jonas, Colling, Richard, Mirtti, Tuomas, Hamdy, Freddie C., Woodcock, Dan J., Helleday, Thomas, Mills, Ian G., Lamb, Alastair D., Lundeberg, Joakim

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Lab-on-chip tracing circulating tumour cells von Lagae, L., Liu, C. X., Latta, D., Henry, O., O'Sullivan, C., Roeser, T., Lundeberg, Joakim, Kvastad, Linda, Riley, I., Borgen, E.

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The spatial RNA integrity number (sRIN) assay for in situ evaluation of transcriptome quality von Kvastad, Linda

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