Antibodies from convalescent plasma promote SARS-CoV-2 clearance in individuals with and without endogenous antibody response von Marconato, Maddalena, Abela, Irene A, Hauser, Anthony, Schwarzmüller, Magdalena, Katzensteiner, Rheliana, Braun, Dominique L, Epp, Selina, Audigé, Annette, Weber, Jacqueline, Rusert, Peter, Schindler, Eméry, Pasin, Chloé, West, Emily, Böni, Jürg, Kufner, Verena, Huber, Michael, Zaheri, Maryam, Schmutz, Stefan, Frey, Beat M, Kouyos, Roger D, Günthard, Huldrych F, Manz, Markus G, Trkola, Alexandra

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Impact of scaling up dolutegravir on antiretroviral resistance in South Africa: A modeling study von Hauser, Anthony, Kusejko, Katharina, Johnson, Leigh F., Guenthard, Huldrych F., Riou, Julien, Wandeler, Gilles, Egger, Matthias, Kouyos, Roger D.

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Early off-label treatment during pandemics? A dilemma von Jan, Roth A., Tala, Ballouz, Roger, Kouyos D., Manuel, Battegay

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Frequency and Spectrum of Unexpected Clinical Manifestations of Primary HIV-1 Infection von Braun, Dominique L., Kouyos, Roger D., Balmer, Belinda, Grube, Christina, Weber, Rainer, Günthard, Huldrych F.

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Assessing the potential impact of transmission during prolonged viral shedding on the effect of lockdown relaxation on COVID-19 von Tepekule, Burcu, Hauser, Anthony, Kachalov, Viacheslav N., Andresen, Sara, Scheier, Thomas, Schreiber, Peter W., Guenthard, Huldrych F., Kouyos, Roger D.

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Identifying Contact Risks for SARS-CoV-2 Transmission to Healthcare Workers during Outbreak on COVID-19 Ward von Zeeb, Marius, Weissberg, Dana, Rampini, Silvana K, Muller, Rouven, Scheier, Thomas, Zingg, Walter, Kouyos, Roger D, Wolfensberger, Aline

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Unsupervised machine learning predicts future sexual behaviour and sexually transmitted infections among HIV-positive men who have sex with men von Andresen, Sara, Balakrishna, Suraj, Mugglin, Catrina, Schmidt, Axel J, Braun, Dominique L, Marzel, Alex, Doco Lecompte, Thanh, Darling, Katharine EA, Roth, Jan A, Schmid, Patrick, Bernasconi, Enos, Günthard, Huldrych F, Rauch, Andri, Kouyos, Roger D, Salazar-Vizcaya, Luisa

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Using viral diversity to identify HIV-1 variants under HLA-dependent selection in a systematic viral genome-wide screen von Neuner-Jehle, Nadia, Zeeb, Marius, Thorball, Christian W, Fellay, Jacques, Metzner, Karin J, Frischknecht, Paul, Neumann, Kathrin, Leeman, Christine, Rauch, Andri, Stöckle, Marcel, Huber, Michael, Perreau, Matthieu, Bernasconi, Enos, Notter, Julia, Hoffmann, Matthias, Leuzinger, Karoline, Günthard, Huldrych F, Pasin, Chloé, Kouyos, Roger D

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Persistence of transmitted HIV-1 drug resistance mutations associated with fitness costs and viral genetic backgrounds von Yang, Wan-Lin, Kouyos, Roger D, Böni, Jürg, Yerly, Sabine, Klimkait, Thomas, Aubert, Vincent, Scherrer, Alexandra U, Shilaih, Mohaned, Hinkley, Trevor, Petropoulos, Christos, Bonhoeffer, Sebastian, Günthard, Huldrych F

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Contribution of a mutational bias in hepatitis C virus replication to the genetic barrier in the development of drug resistance von Powdrill, Megan H, Tchesnokov, Egor P, Kozak, Robert A, Russell, Rodney S, Martin, Ross, Svarovskaia, Evguenia S, Mo, Hongmei, Kouyos, Roger D, Götte, Matthias

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Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level von Kachalov, Viacheslav N., Nguyen, Huyen, Balakrishna, Suraj, Salazar-Vizcaya, Luisa, Sommerstein, Rami, Kuster, Stefan P., Hauser, Anthony, zur Wiesch, Pia Abel, Klein, Eili, Kouyos, Roger D.

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Modeling the measles paradox reveals the importance of cellular immunity in regulating viral clearance von Morris, Sinead E, Yates, Andrew J, de Swart, Rik L, de Vries, Rory D, Mina, Michael J, Nelson, Ashley N, Lin, Wen-Hsuan W, Kouyos, Roger D, Griffin, Diane E, Grenfell, Bryan T

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Prolonged persistence of measles virus RNA is characteristic of primary infection dynamics von Lin, Wen-Hsuan W, Kouyos, Roger D, Adams, Robert J, Grenfell, Bryan T, Griffin, Diane E

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Genomic Surveillance of Vancomycin-Resistant Enterococcus faecium Reveals Spread of a Linear Plasmid Conferring a Nutrient Utilization Advantage von Boumasmoud, Mathilde, Dengler Haunreiter, Vanina, Schweizer, Tiziano A, Meyer, Lilly, Chakrakodi, Bhavya, Schreiber, Peter W, Seidl, Kati, Kühnert, Denise, Kouyos, Roger D, Zinkernagel, Annelies S

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Exploring the complexity of the HIV-1 fitness landscape von Kouyos, Roger D, Leventhal, Gabriel E, Hinkley, Trevor, Haddad, Mojgan, Whitcomb, Jeannette M, Petropoulos, Christos J, Bonhoeffer, Sebastian

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Molecular Epidemiology Reveals Long-Term Changes in HIV Type 1 Subtype B Transmission in Switzerland von Kouyos, Roger D., von Wyl, Viktor, Yerly, Sabine, Böni, Jürg, Taffé, Patrick, Shah, Cyril, Börgisser, Philippe, Klimkait, Thomas, Weber, Rainer, Hirschel, Bernard, Cavassini, Matthias, Furrer, Hansjakob, Battegay, Manuel, Vernazza, Pietro L., Bernasconi, Enos, Rickenbach, Martin, Ledergerber, Bruno, Bonhoeffer, Sebastian, Günthard, Huldrych F.

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Bridging the gap between HIV epidemiology and antiretroviral resistance evolution: Modelling the spread of resistance in South Africa von Hauser, Anthony, Kusejko, Katharina, Johnson, Leigh F, Wandeler, Gilles, Riou, Julien, Goldstein, Fardo, Egger, Matthias, Kouyos, Roger D

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Diagnosis of latent tuberculosis infection is associated with reduced HIV viral load and lower risk for opportunistic infections in people living with HIV von Kusejko, Katharina, Gunthard, Huldrych F., Olson, Gregory S., Zens, Kyra, Darling, Katharine, Khanna, Nina, Furrer, Hansjakob, Vetter, Pauline, Bernasconi, Enos, Vernazza, Pietro, Hoffmann, Matthias, Kouyos, Roger D., Nemeth, Johannes

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HIV-1 subtype-specific drug resistance on dolutegravir-based antiretroviral therapy: protocol for a multicentre study (DTG RESIST) von Egger, Matthias, Sauermann, Mamatha, Loosli, Tom, Hossmann, Stefanie, Riedo, Selma, Beerenwinkel, Niko, Jaquet, Antoine, Minga, Albert, Ross, Jeremy, Giandhari, Jennifer, Kouyos, Roger D, Lessells, Richard

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Author Correction: Efficient microbial colony growth dynamics quantification with ColTapp, an automated image analysis application von Bär, Julian, Boumasmoud, Mathilde, Kouyos, Roger D., Zinkernagel, Annelies S., Vulin, Clément

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