Chipster: user-friendly analysis software for microarray and other high-throughput data von Kallio, M Aleksi, Tuimala, Jarno T, Hupponen, Taavi, Klemelä, Petri, Gentile, Massimiliano, Scheinin, Ilari, Koski, Mikko, Käki, Janne, Korpelainen, Eija I

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MicroRNA expression profiling reveals miRNA families regulating specific biological pathways in mouse frontal cortex and hippocampus von Juhila, Juuso, Sipilä, Tessa, Icay, Katherine, Nicorici, Daniel, Ellonen, Pekka, Kallio, Aleksi, Korpelainen, Eija, Greco, Dario, Hovatta, Iiris

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RNA-seq Data Analysis: A Practical Approach von Korpelainen, Eija

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Signaling angiogenesis and lymphangiogenesis von Korpelainen, Eija I, Alitalo, Kari

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Vascular Endothelial Growth Factor B (VEGF-B) Binds to VEGF Receptor-1 and Regulates Plasminogen Activator Activity in Endothelial Cells von Olofsson, Birgitta, Korpelainen, Eija, Pepper, Michael S., Mandriota, Stefano J., Aase, Karin, Kumar, Vijay, Gunji, Yuji, Jeltsch, Michael M., Shibuya, Masabumi, Alitalo, Kari, Eriksson, Ulf

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Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action von Pawlik, Aleksandra, van Gelder, Celia W G, Nenadic, Aleksandra, Palagi, Patricia M, Korpelainen, Eija, Lijnzaad, Philip, Marek, Diana, Sansone, Susanna-Assunta, Hancock, John, Goble, Carole

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BioImg.org: A Catalog of Virtual Machine Images for the Life Sciences von Dahlö, Martin, Haziza, Frédéric, Kallio, Aleksi, Korpelainen, Eija, Bongcam-Rudloff, Erik, Spjuth, Ola

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Endothelial receptor tyrosine kinases activate the STAT signaling pathway : mutant Tie-2 causing venous malformations signals a distinct STAT activation response von KORPELAINEN, E. I, KÄRKKÄINEN, M, GUNJI, Y, VIKKULA, M, ALITALO, K

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Hadoop-BAM: directly manipulating next generation sequencing data in the cloud von NIEMENMAA, Matti, KALLIO, Aleksi, SCHUMACHER, Andre, KLEMELÄ, Petri, KORPELAINEN, Eija, HELJANKO, Keijo

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SeqPig: simple and scalable scripting for large sequencing data sets in Hadoop von Schumacher, André, Pireddu, Luca, Niemenmaa, Matti, Kallio, Aleksi, Korpelainen, Eija, Zanetti, Gianluigi, Heljanko, Keijo

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Biolmg.org: A Catalog of Virtual Machine Images for the Life Sciences von Dahlö, Martin, Haziza, Frέdέric, Kallio, Aleksi, Korpelainen, Eija, Bongcam-Rudloff, Erik, Spjuth, Ola

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Overexpression of VEGF in Testis and Epididymis Causes Infertility in Transgenic Mice: Evidence for Nonendothelial Targets for VEGF von Korpelainen, Eija I., Karkkainen, Marika J., Tenhunen, Auri, Lakso, Merja, Rauvala, Heikki, Vierula, Matti, Parvinen, Martti, Alitalo, Kari

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Systems approach for analysing problems in IT system adoption at work von Korpelainen, Eija, Kira, Mari

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PDB_REDO: automated re-refinement of X-ray structure models in the PDB von Joosten, Robbie P., Salzemann, Jean, Bloch, Vincent, Stockinger, Heinz, Berglund, Ann-Charlott, Blanchet, Christophe, Bongcam-Rudloff, Erik, Combet, Christophe, Da Costa, Ana L., Deleage, Gilbert, Diarena, Matteo, Fabbretti, Roberto, Fettahi, Géraldine, Flegel, Volker, Gisel, Andreas, Kasam, Vinod, Kervinen, Timo, Korpelainen, Eija, Mattila, Kimmo, Pagni, Marco, Reichstadt, Matthieu, Breton, Vincent, Tickle, Ian J., Vriend, Gert

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The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers von Corpas, Manuel, Jimenez, Rafael C, Bongcam-Rudloff, Erik, Budd, Aidan, Brazas, Michelle D, Fernandes, Pedro L, Gaeta, Bruno, van Gelder, Celia, Korpelainen, Eija, Lewitter, Fran, McGrath, Annette, MacLean, Daniel, Palagi, Patricia M, Rother, Kristian, Taylor, Jan, Via, Allegra, Watson, Mick, Schneider, Maria Victoria, Attwood, Teresa K

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A framework to assess the quality and impact of bioinformatics training across ELIXIR von Gurwitz, Kim T., Gaur, Prakash Singh, Bellis, Louisa J., Larcombe, Lee, Alloza, Eva, Balint, Balint Laszlo, Botzki, Alexander, Dimec, Jure, del Angel, Victoria Dominguez, Fernandes, Pedro L., Korpelainen, Eija, Krause, Roland, Kuzak, Mateusz, Le Pera, Loredana, Leskosek, Brane, Lindvall, Jessica M., Marek, Diana, Martinez, Paula A., Muyldermans, Tuur, Nygard, Stale, Palagi, Patricia M., Peterson, Hedi, Psomopoulos, Fotis, Spiwok, Vojtech, van Gelder, Celia W. G., Via, Allegra, Vidak, Marko, Wibberg, Daniel, Morgan, Sarah L., Rustici, Gabriella

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Experiences with workflows for automating data-intensive bioinformatics von Spjuth, Ola, Bongcam-Rudloff, Erik, Hernández, Guillermo Carrasco, Forer, Lukas, Giovacchini, Mario, Guimera, Roman Valls, Kallio, Aleksi, Korpelainen, Eija, Kańduła, Maciej M, Krachunov, Milko, Kreil, David P, Kulev, Ognyan, Łabaj, Paweł P, Lampa, Samuel, Pireddu, Luca, Schönherr, Sebastian, Siretskiy, Alexey, Vassilev, Dimitar

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Employees' choices in learning how to use information and communication technology systems at work: strategies and approaches von Korpelainen, Eija, Kira, Mari

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Community-driven ELIXIR activities in single-cell omics [version 1; peer review: 2 approved with reservations] von Czarnewski, Paulo, Mahfouz, Ahmed, Calogero, Raffaele A., Palagi, Patricia M., Portell-Silva, Laura, Gonzalez-Uriarte, Asier, Soneson, Charlotte, Burdett, Tony, Szomolay, Barbara, Videm, Pavankumar, Hotz, Hans-Rudolf, Papatheodorou, Irene, Hancock, John M., Grüning, Björn, Haerty, Wilfried, Krause, Roland, Capella-Gutierrez, Salvador, Leskošek, Brane, Alessandri, Luca, Arigoni, Maddalena, Rezen, Tadeja, Botzki, Alexander, Ferk, Polonca, Lindvall, Jessica, Heil, Katharina F., Ishaque, Naveed, Korpelainen, Eija

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Recommendations on e-infrastructures for next-generation sequencing von Spjuth, Ola, Bongcam-Rudloff, Erik, Dahlberg, Johan, Dahlö, Martin, Kallio, Aleksi, Pireddu, Luca, Vezzi, Francesco, Korpelainen, Eija

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